RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 GREM2Q9H772 168 aa16.08■□□□□ 0.17
PCDH8-201ENST00000338862 PLEKHG1Q9ULL1 1385 aa16.08■□□□□ 0.17
PCDH8-201ENST00000338862 FAM205CA6NFA0 338 aa16.08■□□□□ 0.16
PCDH8-201ENST00000338862 CUTAO60888 179 aa16.08■□□□□ 0.16
PCDH8-201ENST00000338862 CC2D1AQ6P1N0 951 aaPredicted RBP16.08■□□□□ 0.16
PCDH8-201ENST00000338862 SLC35F6Q8N357 371 aa16.08■□□□□ 0.16
PCDH8-201ENST00000338862 OXER1Q8TDS5 423 aa16.08■□□□□ 0.16
PCDH8-201ENST00000338862 CSRNP2Q9H175 543 aa16.08■□□□□ 0.16
PCDH8-201ENST00000338862 FOXP4Q8IVH2 680 aaPredicted RBP16.08■□□□□ 0.16
PCDH8-201ENST00000338862 NOSTRINQ8IVI9 506 aa16.08■□□□□ 0.16
PCDH8-201ENST00000338862 SDR42E1Q8WUS8 393 aa16.08■□□□□ 0.16
PCDH8-201ENST00000338862 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.08■□□□□ 0.16
PCDH8-201ENST00000338862 BRMS1Q9HCU9 246 aa16.08■□□□□ 0.16
PCDH8-201ENST00000338862 ZSWIM5Q9P217 1185 aa16.08■□□□□ 0.16
PCDH8-201ENST00000338862 TFR2Q9UP52 801 aa16.08■□□□□ 0.16
PCDH8-201ENST00000338862 TADA3O75528 432 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 FOXO4P98177 505 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 DNAJC10Q8IXB1 793 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 TMOD3Q9NYL9 352 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 HPS5Q9UPZ3 1129 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 FAN1Q9Y2M0 1017 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 RAD51AP2Q09MP3 1159 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 TTC19Q6DKK2 380 aaPredicted RBP16.07■□□□□ 0.16
PCDH8-201ENST00000338862 MRPL44Q9H9J2 332 aaKnown RBP16.07■□□□□ 0.16
PCDH8-201ENST00000338862 MACROD2A1Z1Q3 448 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 TRIM75PA6NK02 468 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 MCAMP43121 646 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 NLRP5P59047 1200 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 UBXN1Q04323 297 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 NCAPH2Q6IBW4 605 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 GPR161Q8N6U8 529 aaKnown RBP16.07■□□□□ 0.16
PCDH8-201ENST00000338862 WASF1Q92558 559 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 PARP3Q9Y6F1 533 aa16.07■□□□□ 0.16
PCDH8-201ENST00000338862 BAZ2BQ9UIF8 2168 aaKnown RBP16.06■□□□□ 0.16
PCDH8-201ENST00000338862 N4BP1O75113 896 aaKnown RBP16.06■□□□□ 0.16
PCDH8-201ENST00000338862 KRT9P35527 623 aa16.06■□□□□ 0.16
PCDH8-201ENST00000338862 UIMC1Q96RL1 719 aa16.06■□□□□ 0.16
PCDH8-201ENST00000338862 CRACR2AQ9BSW2 395 aa16.06■□□□□ 0.16
PCDH8-201ENST00000338862 ADAM21Q9UKJ8 722 aa16.06■□□□□ 0.16
PCDH8-201ENST00000338862 GOLGA6L9A6NEM1 432 aa16.06■□□□□ 0.16
PCDH8-201ENST00000338862 SASH3O75995 380 aa16.06■□□□□ 0.16
PCDH8-201ENST00000338862 ZCRB1Q8TBF4 217 aaKnown RBP16.06■□□□□ 0.16
PCDH8-201ENST00000338862 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
PCDH8-201ENST00000338862 PIH1D3Q9NQM4 214 aaKnown RBP16.06■□□□□ 0.16
PCDH8-201ENST00000338862 ERBB3P21860 1342 aa16.06■□□□□ 0.16
PCDH8-201ENST00000338862 FAM107BQ9H098 131 aa16.06■□□□□ 0.16
PCDH8-201ENST00000338862 PXDNQ92626 1479 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 IRS4O14654 1257 aaPredicted RBP16.05■□□□□ 0.16
PCDH8-201ENST00000338862 MB21D2Q8IYB1 491 aaPredicted RBP16.05■□□□□ 0.16
PCDH8-201ENST00000338862 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 SYNRGQ9UMZ2 1314 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 IKBKBO14920 756 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 H2AFXP16104 143 aaPredicted RBP16.05■□□□□ 0.16
PCDH8-201ENST00000338862 PDE6AP16499 860 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 CYP7A1P22680 504 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 REXO1L1PQ8IX06 675 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 ACBD3Q9H3P7 528 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 MAGEC2Q9UBF1 373 aaPredicted RBP16.05■□□□□ 0.16
PCDH8-201ENST00000338862 ZMYM6O95789 1325 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 NEDD4P46934 1319 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 CYP2D7A0A087X1C5 515 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
PCDH8-201ENST00000338862 RUFY1Q96T51 708 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 RASSF4Q9H2L5 321 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 DEF6Q9H4E7 631 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 POLD4Q9HCU8 107 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 ABCB6Q9NP58 842 aa16.05■□□□□ 0.16
PCDH8-201ENST00000338862 PHLPP2Q6ZVD8 1323 aa16.04■□□□□ 0.16
PCDH8-201ENST00000338862 SRGAP2O75044 1071 aa16.04■□□□□ 0.16
PCDH8-201ENST00000338862 CTR9Q6PD62 1173 aa16.04■□□□□ 0.16
PCDH8-201ENST00000338862 GSPT2Q8IYD1 628 aaKnown RBP16.04■□□□□ 0.16
PCDH8-201ENST00000338862 CEP131Q9UPN4 1083 aa16.04■□□□□ 0.16
PCDH8-201ENST00000338862 ZPR1O75312 459 aa16.04■□□□□ 0.16
PCDH8-201ENST00000338862 RNASE9P60153 205 aaKnown RBP16.04■□□□□ 0.16
PCDH8-201ENST00000338862 TMEM51Q9NW97 253 aa16.04■□□□□ 0.16
PCDH8-201ENST00000338862 PEAK1Q9H792 1746 aa16.04■□□□□ 0.16
PCDH8-201ENST00000338862 CYP2C19P33261 490 aa16.04■□□□□ 0.16
PCDH8-201ENST00000338862 NOM1Q5C9Z4 860 aaKnown RBP16.04■□□□□ 0.16
PCDH8-201ENST00000338862 NOC3LQ8WTT2 800 aaKnown RBP16.04■□□□□ 0.16
PCDH8-201ENST00000338862 PIK3AP1Q6ZUJ8 805 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 NKX2-3Q8TAU0 364 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 TANGO6Q9C0B7 1094 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 L2HGDHQ9H9P8 463 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 MARCH6O60337 910 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 TRIM21P19474 475 aaKnown RBP16.03■□□□□ 0.16
PCDH8-201ENST00000338862 TXLNAP40222 546 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 HDXQ7Z353 690 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 MLKLQ8NB16 471 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 CCDC148Q8NFR7 591 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 H0YHG0 523 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 H7C1W4 665 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 STX10O60499 249 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 CCDC122Q5T0U0 273 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 TRIM65Q6PJ69 517 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 IFNL3Q8IZI9 196 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 TRIM47Q96LD4 638 aa16.03■□□□□ 0.16
PCDH8-201ENST00000338862 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.03■□□□□ 0.16
PCDH8-201ENST00000338862 PXDNLA1KZ92 1463 aa16.02■□□□□ 0.16
PCDH8-201ENST00000338862 SF3A3Q12874 501 aaKnown RBP eCLIP16.02■□□□□ 0.16
PCDH8-201ENST00000338862 GPATCH11Q8N954 259 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms