RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 RUFY1Q96T51 708 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 TMX1Q9H3N1 280 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 CLIC4Q9Y696 253 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 MYO1BO43795 1136 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 CASQ1P31415 396 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 TCERG1LQ5VWI1 586 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 MLKLQ8NB16 471 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 HDAC9Q9UKV0 1011 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.15□□□□□ -1.27
PRKDC-202ENST00000338368 IFNAR1P17181 557 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 RASGRF1Q13972 1273 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 CERS3Q8IU89 383 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 QTRT2Q9H974 415 aaKnown RBP7.15□□□□□ -1.27
PRKDC-202ENST00000338368 ZSWIM5Q9P217 1185 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 APBA3O96018 575 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 NLRP12P59046 1061 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 PDCL3Q9H2J4 239 aa7.15□□□□□ -1.27
PRKDC-202ENST00000338368 NONOQ15233 471 aaKnown RBP eCLIP7.14□□□□□ -1.27
PRKDC-202ENST00000338368 PLIN2Q99541 437 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 ZDHHC9Q9Y397 364 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 ZNF75DP51815 510 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 TBC1D22AQ8WUA7 517 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 RTEL1Q9NZ71 1219 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 RIPOR2Q9Y4F9 1068 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 SALL3Q9BXA9 1300 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 TMEM131LA2VDJ0 1609 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 PPP1R12BO60237 982 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-202ENST00000338368 ATP2B4P23634 1241 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 CMA1P23946 247 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 MFSD14BQ5SR56 506 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 TMCO3Q6UWJ1 677 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 DYNC1I1O14576 645 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 SERPINB2P05120 415 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 GNG11P61952 73 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 ARHGAP23Q9P227 1491 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 FAM114A1Q8IWE2 563 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 LEMD3Q9Y2U8 911 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 CLTCQ00610 1675 aaKnown RBP7.14□□□□□ -1.27
PRKDC-202ENST00000338368 ZC3H13Q5T200 1668 aaKnown RBP7.14□□□□□ -1.27
PRKDC-202ENST00000338368 MRPL12P52815 198 aaKnown RBP7.14□□□□□ -1.27
PRKDC-202ENST00000338368 TSGA10IPQ3SY00 556 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 CCDC40Q4G0X9 1142 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 STAMQ92783 540 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 DIP2AQ14689 1571 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 SOS2Q07890 1332 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-202ENST00000338368 KIF23Q02241 960 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-202ENST00000338368 ALDH8A1Q9H2A2 487 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-202ENST00000338368 GPCPD1Q9NPB8 672 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.14□□□□□ -1.273e-7■■■□□ 14.7
PRKDC-202ENST00000338368 EHMT1Q9H9B1 1298 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 BSDC1Q9NW68 430 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-202ENST00000338368 LINC00301Q8NCQ3 95 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 DNAI1Q9UI46 699 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 KIAA1210Q9ULL0 1709 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 NDUFA8P51970 172 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 TNIP1Q15025 636 aa7.14□□□□□ -1.27
PRKDC-202ENST00000338368 TSPOAP1O95153 1857 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 ASIC1P78348 528 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 FANCCQ00597 558 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 TRMT1LQ7Z2T5 733 aaKnown RBP7.13□□□□□ -1.27
PRKDC-202ENST00000338368 TRPC5Q9UL62 973 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-202ENST00000338368 TNNI2P48788 182 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 XDHP47989 1333 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 TXKP42681 527 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 PNOCQ13519 176 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 ZNF34Q8IZ26 560 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 SMARCC2Q8TAQ2 1214 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 DNAI2Q9GZS0 605 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 ARID4AP29374 1257 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-202ENST00000338368 ZFYVE27Q5T4F4 411 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 PNMA1Q8ND90 353 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 MINPP1Q9UNW1 487 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 SPDYE3A6NKU9 549 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 CELF1Q92879 486 aaKnown RBP7.13□□□□□ -1.27
PRKDC-202ENST00000338368 FMNL1O95466 1100 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-202ENST00000338368 TAF3Q5VWG9 929 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 FERMT2Q96AC1 680 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 USO1O60763 962 aaKnown RBP7.13□□□□□ -1.27
PRKDC-202ENST00000338368 PLCD1P51178 756 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 NLGN1Q8N2Q7 840 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 LRWD1Q9UFC0 647 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 TTF2Q9UNY4 1162 aaKnown RBP7.13□□□□□ -1.27
PRKDC-202ENST00000338368 TAF6LQ9Y6J9 622 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 LIFRP42702 1097 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 DOK7Q18PE1 504 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 FEZ1Q99689 392 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 RNF26Q9BY78 433 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-202ENST00000338368 RFX7Q2KHR2 1363 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 H0YIN7 160 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 KRT25Q7Z3Z0 450 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 A0A1W2PQ27 194 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 A0A1W2PQ64 194 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 A0A1W2PQD8 194 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 SH2B2O14492 632 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-202ENST00000338368 TBC1D10CQ8IV04 446 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 C17orf53Q8N3J3 647 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-202ENST00000338368 CLIC6Q96NY7 704 aa7.13□□□□□ -1.27
PRKDC-202ENST00000338368 PXDNLA1KZ92 1463 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 SCG2P13521 617 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 STOX1Q6ZVD7 989 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms