RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 CPVLQ9H3G5 476 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 BSDC1Q9NW68 430 aaPredicted RBP10.24□□□□□ -0.77
SNCA-201ENST00000336904 TRMT1Q9NXH9 659 aaKnown RBP10.24□□□□□ -0.77
SNCA-201ENST00000336904 SAP30BPQ9UHR5 308 aaKnown RBP10.24□□□□□ -0.77
SNCA-201ENST00000336904 SMC2O95347 1197 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 ATP1A3P13637 1013 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 OLFM4Q6UX06 510 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 BARGINQ6ZT62 677 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 ZNF592Q92610 1267 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 STAMQ92783 540 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.24□□□□□ -0.77
SNCA-201ENST00000336904 CABP5Q9NP86 173 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 LRRC4BQ9NT99 713 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 RTCBQ9Y3I0 505 aaKnown RBP10.24□□□□□ -0.77
SNCA-201ENST00000336904 V9GY48 417 aaPredicted RBP10.24□□□□□ -0.77
SNCA-201ENST00000336904 BCL9LQ86UU0 1499 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 MYH13Q9UKX3 1938 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 USP27XA6NNY8 438 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 SLC3A2P08195 630 aaKnown RBP10.23□□□□□ -0.77
SNCA-201ENST00000336904 RFC4P35249 363 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 TOB1P50616 345 aaPredicted RBP10.23□□□□□ -0.77
SNCA-201ENST00000336904 LONRF3Q496Y0 759 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 TDRD7Q8NHU6 1098 aaKnown RBP10.23□□□□□ -0.77
SNCA-201ENST00000336904 GNL3LQ9NVN8 582 aaKnown RBP10.23□□□□□ -0.77
SNCA-201ENST00000336904 POLR3EQ9NVU0 708 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 HIBADHP31937 336 aaKnown RBP10.23□□□□□ -0.77
SNCA-201ENST00000336904 SYKP43405 635 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 CTR9Q6PD62 1173 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 FANCBQ8NB91 859 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 KCNG4Q8TDN1 519 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 KRT23Q9C075 422 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 LRP5O75197 1615 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 SART3Q15020 963 aaKnown RBP10.23□□□□□ -0.77
SNCA-201ENST00000336904 PLA2G4DQ86XP0 818 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 STAG1Q8WVM7 1258 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 KIAA1468Q9P260 1216 aa10.23□□□□□ -0.77
SNCA-201ENST00000336904 LTBP4Q8N2S1 1624 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 CDKL5O76039 1030 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 PRR29P0C7W0 189 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 PDIA4P13667 645 aaKnown RBP10.22□□□□□ -0.77
SNCA-201ENST00000336904 SLC39A14Q15043 492 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 IFIT1BQ5T764 474 aaKnown RBP10.22□□□□□ -0.77
SNCA-201ENST00000336904 BRAPQ7Z569 592 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 SGMS1Q86VZ5 419 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 NSUN4Q96CB9 384 aaKnown RBP10.22□□□□□ -0.77
SNCA-201ENST00000336904 MCM9Q9NXL9 1143 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 NARFQ9UHQ1 456 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 COL22A1Q8NFW1 1626 aaPredicted RBP10.22□□□□□ -0.77
SNCA-201ENST00000336904 CHD4Q14839 1912 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 FMNL1O95466 1100 aaPredicted RBP10.22□□□□□ -0.77
SNCA-201ENST00000336904 SLURP2P0DP57 97 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 PTPAQ15257 358 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 NBPF11Q86T75 865 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 DZIP1Q86YF9 867 aaKnown RBP10.22□□□□□ -0.77
SNCA-201ENST00000336904 TRMT44Q8IYL2 757 aaKnown RBP10.22□□□□□ -0.77
SNCA-201ENST00000336904 CEP57L1Q8IYX8 460 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 FBXL16Q8N461 479 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 KIAA1524Q8TCG1 905 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 AK7Q96M32 723 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 MAP3K14Q99558 947 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 IFNKQ9P0W0 207 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 ZNF804BA4D1E1 1349 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 ECM29Q5VYK3 1845 aa10.22□□□□□ -0.77
SNCA-201ENST00000336904 F8W031 263 aaPredicted RBP10.21□□□□□ -0.77
SNCA-201ENST00000336904 SF3B3Q15393 1217 aaKnown RBP10.21□□□□□ -0.77
SNCA-201ENST00000336904 ALX1Q15699 326 aa10.21□□□□□ -0.77
SNCA-201ENST00000336904 TPTE2Q6XPS3 522 aa10.21□□□□□ -0.77
SNCA-201ENST00000336904 NOSTRINQ8IVI9 506 aa10.21□□□□□ -0.77
SNCA-201ENST00000336904 TRIM22Q8IYM9 498 aa10.21□□□□□ -0.77
SNCA-201ENST00000336904 CRACR2BQ8N4Y2 399 aaPredicted RBP10.21□□□□□ -0.77
SNCA-201ENST00000336904 RASGRP4Q8TDF6 673 aa10.21□□□□□ -0.77
SNCA-201ENST00000336904 ZSCAN10Q96SZ4 725 aaPredicted RBP10.21□□□□□ -0.77
SNCA-201ENST00000336904 CNNM2Q9H8M5 875 aa10.21□□□□□ -0.77
SNCA-201ENST00000336904 ANO10Q9NW15 660 aa10.21□□□□□ -0.77
SNCA-201ENST00000336904 RPS6KA4O75676 772 aa10.21□□□□□ -0.78
SNCA-201ENST00000336904 YEATS4O95619 227 aa10.21□□□□□ -0.78
SNCA-201ENST00000336904 MMP1P03956 469 aa10.21□□□□□ -0.78
SNCA-201ENST00000336904 CDC25AP30304 524 aa10.21□□□□□ -0.78
SNCA-201ENST00000336904 LIFRP42702 1097 aa10.21□□□□□ -0.78
SNCA-201ENST00000336904 UBE4AQ14139 1066 aa10.21□□□□□ -0.78
SNCA-201ENST00000336904 FOXP4Q8IVH2 680 aaPredicted RBP10.21□□□□□ -0.78
SNCA-201ENST00000336904 ESR2Q92731 530 aa10.21□□□□□ -0.78
SNCA-201ENST00000336904 GPKOWQ92917 476 aaPredicted RBP eCLIP10.21□□□□□ -0.78
SNCA-201ENST00000336904 PNPLA7Q6ZV29 1317 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.2□□□□□ -0.78
SNCA-201ENST00000336904 USP17L3A6NCW0 530 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 USP17L4A6NCW7 530 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 POLR2DO15514 142 aaKnown RBP10.2□□□□□ -0.78
SNCA-201ENST00000336904 NAA30Q147X3 362 aaPredicted RBP10.2□□□□□ -0.78
SNCA-201ENST00000336904 ZNF174Q15697 407 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 VPS72Q15906 364 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 CLEC4GQ6UXB4 293 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 USP17L1Q7RTZ2 530 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 METTL16Q86W50 562 aaKnown RBP10.2□□□□□ -0.78
SNCA-201ENST00000336904 MAPKAPK5Q8IW41 473 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 SH3RF3Q8TEJ3 882 aaPredicted RBP10.2□□□□□ -0.78
SNCA-201ENST00000336904 XPO4Q9C0E2 1151 aaKnown RBP10.2□□□□□ -0.78
SNCA-201ENST00000336904 DCP1AQ9NPI6 582 aaPredicted RBP10.2□□□□□ -0.78
SNCA-201ENST00000336904 GOLGA6L6A8MZA4 724 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 GOLGA8HP0CJ92 632 aa10.2□□□□□ -0.78
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