RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 LAMB1P07942 1786 aa16.78■□□□□ 0.28
APOBEC3B-202ENST00000335760 ZMYM6O95789 1325 aa16.78■□□□□ 0.28
APOBEC3B-202ENST00000335760 FAM196BA6NMK8 535 aa16.78■□□□□ 0.28
APOBEC3B-202ENST00000335760 SMIM22K7EJ46 135 aa16.78■□□□□ 0.28
APOBEC3B-202ENST00000335760 PPP1R12BO60237 982 aaPredicted RBP16.78■□□□□ 0.28
APOBEC3B-202ENST00000335760 ZNF341Q9BYN7 854 aa16.78■□□□□ 0.28
APOBEC3B-202ENST00000335760 LSG1Q9H089 658 aaKnown RBP16.78■□□□□ 0.28
APOBEC3B-202ENST00000335760 EHD4Q9H223 541 aa16.78■□□□□ 0.28
APOBEC3B-202ENST00000335760 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.78■□□□□ 0.28
APOBEC3B-202ENST00000335760 SERPINB13Q9UIV8 391 aa16.78■□□□□ 0.28
APOBEC3B-202ENST00000335760 TBC1D12O60347 775 aa16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 MOB2Q70IA6 237 aa16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 ARMC9Q7Z3E5 817 aa16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 METTL16Q86W50 562 aaKnown RBP16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 STK11IPQ8N1F8 1099 aa16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 C2orf69Q8N8R5 385 aa16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 MAP4K1Q92918 833 aa16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 DYNLL2Q96FJ2 89 aa16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 GBA2Q9HCG7 927 aaPredicted RBP16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 CTNNA3Q9UI47 895 aa16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 HERC5Q9UII4 1024 aaKnown RBP16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 ANGEL1Q9UNK9 670 aaKnown RBP16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
APOBEC3B-202ENST00000335760 USP2O75604 605 aaPredicted RBP16.77■□□□□ 0.27
APOBEC3B-202ENST00000335760 MAP3K10Q02779 954 aa16.77■□□□□ 0.27
APOBEC3B-202ENST00000335760 PPARAQ07869 468 aa16.77■□□□□ 0.27
APOBEC3B-202ENST00000335760 DNAJC18Q9H819 358 aa16.77■□□□□ 0.27
APOBEC3B-202ENST00000335760 PAPPA2Q9BXP8 1791 aa16.76■□□□□ 0.27
APOBEC3B-202ENST00000335760 ZNF213O14771 459 aa16.76■□□□□ 0.27
APOBEC3B-202ENST00000335760 REC8O95072 547 aa16.76■□□□□ 0.27
APOBEC3B-202ENST00000335760 IREB2P48200 963 aaKnown RBP16.76■□□□□ 0.27
APOBEC3B-202ENST00000335760 HAND2P61296 217 aa16.76■□□□□ 0.27
APOBEC3B-202ENST00000335760 FKBP1BP68106 108 aa16.76■□□□□ 0.27
APOBEC3B-202ENST00000335760 CTDSPL2Q05D32 466 aa16.76■□□□□ 0.27
APOBEC3B-202ENST00000335760 GABPAQ06546 454 aa16.76■□□□□ 0.27
APOBEC3B-202ENST00000335760 C8orf34Q49A92 452 aa16.76■□□□□ 0.27
APOBEC3B-202ENST00000335760 RBM8AQ9Y5S9 174 aaKnown RBP16.76■□□□□ 0.27
APOBEC3B-202ENST00000335760 ROBO3Q96MS0 1386 aa16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 UBE2Q2LH0YL09 131 aa16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 SLC3A2P08195 630 aaKnown RBP16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 IMMTQ16891 758 aaKnown RBP16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 SLC44A5Q8NCS7 719 aa16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 KLRG1Q96E93 195 aa16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 WRNIP1Q96S55 665 aa16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 SWAP70Q9UH65 585 aa16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 ZNF112Q9UJU3 913 aa16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 ANAPC4Q9UJX5 808 aa16.75■□□□□ 0.27
APOBEC3B-202ENST00000335760 PHF20L1A8MW92 1017 aa16.74■□□□□ 0.27
APOBEC3B-202ENST00000335760 CDK8P49336 464 aa16.74■□□□□ 0.27
APOBEC3B-202ENST00000335760 APLP1P51693 650 aa16.74■□□□□ 0.27
APOBEC3B-202ENST00000335760 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
APOBEC3B-202ENST00000335760 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.74■□□□□ 0.27
APOBEC3B-202ENST00000335760 MKNK2Q9HBH9 465 aa16.74■□□□□ 0.27
APOBEC3B-202ENST00000335760 LAMA4Q16363 1823 aa16.73■□□□□ 0.27
APOBEC3B-202ENST00000335760 INPP5BP32019 993 aa16.73■□□□□ 0.27
APOBEC3B-202ENST00000335760 SHMT1P34896 483 aa16.73■□□□□ 0.27
APOBEC3B-202ENST00000335760 C1QTNF8P60827 252 aa16.73■□□□□ 0.27
APOBEC3B-202ENST00000335760 MAP3K9P80192 1104 aa16.73■□□□□ 0.27
APOBEC3B-202ENST00000335760 TATDN1Q6P1N9 297 aa16.73■□□□□ 0.27
APOBEC3B-202ENST00000335760 INCENPQ9NQS7 918 aa16.73■□□□□ 0.27
APOBEC3B-202ENST00000335760 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.73■□□□□ 0.27
APOBEC3B-202ENST00000335760 TAOK2Q9UL54 1235 aa16.73■□□□□ 0.27
APOBEC3B-202ENST00000335760 ABT1Q9ULW3 272 aaKnown RBP16.73■□□□□ 0.27
APOBEC3B-202ENST00000335760 EIF5BO60841 1220 aaKnown RBP16.72■□□□□ 0.27
APOBEC3B-202ENST00000335760 PRDM1O75626 825 aa16.72■□□□□ 0.27
APOBEC3B-202ENST00000335760 PDE4BQ07343 736 aa16.72■□□□□ 0.27
APOBEC3B-202ENST00000335760 RRP1BQ14684 758 aaKnown RBP16.72■□□□□ 0.27
APOBEC3B-202ENST00000335760 CERKLQ49MI3 558 aaPredicted RBP16.72■□□□□ 0.27
APOBEC3B-202ENST00000335760 TBC1D10CQ8IV04 446 aa16.72■□□□□ 0.27
APOBEC3B-202ENST00000335760 ANKRD13AQ8IZ07 590 aa16.72■□□□□ 0.27
APOBEC3B-202ENST00000335760 ZKSCAN4Q969J2 545 aaPredicted RBP16.72■□□□□ 0.27
APOBEC3B-202ENST00000335760 NBPF3Q9H094 633 aa16.72■□□□□ 0.27
APOBEC3B-202ENST00000335760 ZNF287Q9HBT7 754 aa16.72■□□□□ 0.27
APOBEC3B-202ENST00000335760 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 MYH8P13535 1937 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 CTNND1O60716 968 aaKnown RBP16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 SEC24BO95487 1268 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 CYP21A2P08686 494 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 HUNKP57058 714 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 VGLL4Q14135 290 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 NECTIN1Q15223 517 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 AKNAD1Q5T1N1 836 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 LDLRAD1Q5T700 205 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 STAG1Q8WVM7 1258 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 CSADQ9Y600 493 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 TACC3Q9Y6A5 838 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 TLL2Q9Y6L7 1015 aa16.71■□□□□ 0.27
APOBEC3B-202ENST00000335760 SLC27A2O14975 620 aa16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 GDF11O95390 407 aa16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 CAP2P40123 477 aa16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 CREB3L3Q68CJ9 461 aa16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 MFSD6Q6ZSS7 791 aa16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 SAPCD2Q86UD0 394 aa16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 ZNF444Q8N0Y2 327 aaPredicted RBP16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 CLMNQ96JQ2 1002 aa16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 USP26Q9BXU7 913 aa16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 RNF41Q9H4P4 317 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms