RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 SEC24BO95487 1268 aa11.72□□□□□ -0.53
SYN3-201ENST00000332840 SDSP20132 328 aa11.72□□□□□ -0.53
SYN3-201ENST00000332840 PRPF38BQ5VTL8 546 aaKnown RBP11.72□□□□□ -0.53
SYN3-201ENST00000332840 CASC1Q6TDU7 716 aa11.72□□□□□ -0.53
SYN3-201ENST00000332840 TEX11Q8IYF3 940 aa11.72□□□□□ -0.53
SYN3-201ENST00000332840 ZNF384Q8TF68 577 aa11.72□□□□□ -0.53
SYN3-201ENST00000332840 ZNF112Q9UJU3 913 aa11.72□□□□□ -0.53
SYN3-201ENST00000332840 TBC1D12O60347 775 aa11.71□□□□□ -0.53
SYN3-201ENST00000332840 GLRX3O76003 335 aaKnown RBP11.71□□□□□ -0.53
SYN3-201ENST00000332840 ATP5JP18859 108 aa11.71□□□□□ -0.53
SYN3-201ENST00000332840 CYP7A1P22680 504 aa11.71□□□□□ -0.53
SYN3-201ENST00000332840 PPATQ06203 517 aa11.71□□□□□ -0.53
SYN3-201ENST00000332840 PPIL2Q13356 520 aa11.71□□□□□ -0.53
SYN3-201ENST00000332840 PICALMQ13492 652 aa11.71□□□□□ -0.53
SYN3-201ENST00000332840 NOL9Q5SY16 702 aaKnown RBP11.71□□□□□ -0.53
SYN3-201ENST00000332840 MIGA2Q7L4E1 593 aa11.71□□□□□ -0.53
SYN3-201ENST00000332840 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
SYN3-201ENST00000332840 ZCCHC17Q9NP64 241 aaKnown RBP11.71□□□□□ -0.53
SYN3-201ENST00000332840 PIH1D3Q9NQM4 214 aaKnown RBP11.71□□□□□ -0.53
SYN3-201ENST00000332840 SNCAIPQ9Y6H5 919 aa11.71□□□□□ -0.53
SYN3-201ENST00000332840 HTTP42858 3142 aa11.7□□□□□ -0.54
SYN3-201ENST00000332840 TESPA1A2RU30 521 aaPredicted RBP11.7□□□□□ -0.54
SYN3-201ENST00000332840 CETPP11597 493 aa11.7□□□□□ -0.54
SYN3-201ENST00000332840 MFAP1P55081 439 aaKnown RBP11.7□□□□□ -0.54
SYN3-201ENST00000332840 MAP3K10Q02779 954 aa11.7□□□□□ -0.54
SYN3-201ENST00000332840 SNAPC2Q13487 334 aa11.7□□□□□ -0.54
SYN3-201ENST00000332840 IFNL1Q8IU54 200 aa11.7□□□□□ -0.54
SYN3-201ENST00000332840 PI4K2BQ8TCG2 481 aa11.7□□□□□ -0.54
SYN3-201ENST00000332840 ZNF296Q8WUU4 475 aaPredicted RBP11.7□□□□□ -0.54
SYN3-201ENST00000332840 DDRGK1Q96HY6 314 aa11.7□□□□□ -0.54
SYN3-201ENST00000332840 DNAJC2Q99543 621 aaKnown RBP11.7□□□□□ -0.54
SYN3-201ENST00000332840 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.7□□□□□ -0.54
SYN3-201ENST00000332840 OSBPL5Q9H0X9 879 aaPredicted RBP11.7□□□□□ -0.54
SYN3-201ENST00000332840 DDX4Q9NQI0 724 aaKnown RBP11.7□□□□□ -0.54
SYN3-201ENST00000332840 PICK1Q9NRD5 415 aa11.7□□□□□ -0.54
SYN3-201ENST00000332840 ECHDC1Q9NTX5 307 aa11.7□□□□□ -0.54
SYN3-201ENST00000332840 AATFQ9NY61 560 aaKnown RBP eCLIP11.7□□□□□ -0.54
SYN3-201ENST00000332840 HERC5Q9UII4 1024 aaKnown RBP11.7□□□□□ -0.54
SYN3-201ENST00000332840 RBBP6Q7Z6E9 1792 aaKnown RBP11.69□□□□□ -0.54
SYN3-201ENST00000332840 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
SYN3-201ENST00000332840 CTNND1O60716 968 aaKnown RBP11.69□□□□□ -0.54
SYN3-201ENST00000332840 TSHZ3Q63HK5 1081 aa11.69□□□□□ -0.54
SYN3-201ENST00000332840 SCYL3Q8IZE3 742 aa11.69□□□□□ -0.54
SYN3-201ENST00000332840 MAGEB6Q8N7X4 407 aa11.69□□□□□ -0.54
SYN3-201ENST00000332840 SH3RF3Q8TEJ3 882 aaPredicted RBP11.69□□□□□ -0.54
SYN3-201ENST00000332840 ZKSCAN4Q969J2 545 aaPredicted RBP11.69□□□□□ -0.54
SYN3-201ENST00000332840 MS4A4AQ96JQ5 239 aa11.69□□□□□ -0.54
SYN3-201ENST00000332840 PAG1Q9NWQ8 432 aa11.69□□□□□ -0.54
SYN3-201ENST00000332840 PI4KBQ9UBF8 816 aa11.69□□□□□ -0.54
SYN3-201ENST00000332840 MYH13Q9UKX3 1938 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 CCL15-CCL14A0A0B4J2E2 113 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 DDTLA6NHG4 134 aaPredicted RBP11.68□□□□□ -0.54
SYN3-201ENST00000332840 GOLIM4O00461 696 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 HLA-DOAP06340 250 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 INPP5BP32019 993 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 GJA5P36382 358 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 CCL15Q16663 113 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 SLC9C2Q5TAH2 1124 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 ZSCAN25Q6NSZ9 544 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 SH3BP5LQ7L8J4 393 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 ZFPM1Q8IX07 1006 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 RILPL2Q969X0 211 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 TBC1D32Q96NH3 1257 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 IPO9Q96P70 1041 aaKnown RBP11.68□□□□□ -0.54
SYN3-201ENST00000332840 HAUS7Q99871 368 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 TRIM34Q9BYJ4 488 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 TBC1D2Q9BYX2 928 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 AK9Q5TCS8 1911 aa11.68□□□□□ -0.54
SYN3-201ENST00000332840 ZSWIM8A7E2V4 1837 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 FLT1P17948 1338 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 OTOFQ9HC10 1997 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 PHF20L1A8MW92 1017 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 GPR25O00155 361 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 IGF2BP3O00425 579 aaKnown RBP eCLIP11.67□□□□□ -0.54
SYN3-201ENST00000332840 CXCL11O14625 94 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 IRF6O14896 467 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 PDE6AP16499 860 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 USP5P45974 858 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 PKN2Q16513 984 aaKnown RBP11.67□□□□□ -0.54
SYN3-201ENST00000332840 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
SYN3-201ENST00000332840 ADGRA1Q86SQ6 560 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 FOXP4Q8IVH2 680 aaPredicted RBP11.67□□□□□ -0.54
SYN3-201ENST00000332840 CRACR2BQ8N4Y2 399 aaPredicted RBP11.67□□□□□ -0.54
SYN3-201ENST00000332840 TGFBRAP1Q8WUH2 860 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 BRI3BPQ8WY22 251 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 C22orf23Q9BZE7 217 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 CRNKL1Q9BZJ0 848 aaKnown RBP11.67□□□□□ -0.54
SYN3-201ENST00000332840 R3HDMLQ9H3Y0 253 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 ANTXR1Q9H6X2 564 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.67□□□□□ -0.54
SYN3-201ENST00000332840 GINM1Q9NU53 330 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 TAOK2Q9UL54 1235 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 KCNH4Q9UQ05 1017 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 LAMB1P07942 1786 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 MAST2Q6P0Q8 1798 aa11.67□□□□□ -0.54
SYN3-201ENST00000332840 TRIOBPQ9H2D6 2365 aa11.66□□□□□ -0.54
SYN3-201ENST00000332840 MAGEB6P1A0A0J9YX57 407 aa11.66□□□□□ -0.54
SYN3-201ENST00000332840 FKTNO75072 461 aa11.66□□□□□ -0.54
SYN3-201ENST00000332840 ARHGEF6Q15052 776 aa11.66□□□□□ -0.54
SYN3-201ENST00000332840 TTC6Q86TZ1 520 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms