RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 BCL2L13Q9BXK5 485 aa7.98□□□□□ -1.13
SMG1-201ENST00000330588 SCN9AQ15858 1988 aa7.98□□□□□ -1.13
SMG1-201ENST00000330588 GOLGB1Q14789 3259 aaKnown RBP7.98□□□□□ -1.13
SMG1-201ENST00000330588 RAD17O75943 681 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 ZNF280AP59817 542 aaPredicted RBP7.97□□□□□ -1.13
SMG1-201ENST00000330588 ARHGAP45Q92619 1136 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 GMLQ99445 158 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 DBNDD1Q9H9R9 158 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 C9orf78Q9NZ63 289 aaPredicted RBP7.97□□□□□ -1.13
SMG1-201ENST00000330588 CNOT7Q9UIV1 285 aaKnown RBP7.97□□□□□ -1.13
SMG1-201ENST00000330588 HDAC5Q9UQL6 1122 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 KIF16BQ96L93 1317 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 PITPNM2Q9BZ72 1349 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 USP17L3A6NCW0 530 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 USP17L4A6NCW7 530 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 FSHRP23945 695 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 FKBP1AP62942 108 aaKnown RBP7.97□□□□□ -1.13
SMG1-201ENST00000330588 C6orf118Q5T5N4 469 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 STRIP1Q5VSL9 837 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 PPP2R2DQ66LE6 453 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 CDC37L1Q7L3B6 337 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 USP17L1Q7RTZ2 530 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 SSH1Q8WYL5 1049 aa7.97□□□□□ -1.13
SMG1-201ENST00000330588 JARID2Q92833 1246 aaPredicted RBP7.97□□□□□ -1.13
SMG1-201ENST00000330588 ZNF804BA4D1E1 1349 aa7.96□□□□□ -1.13
SMG1-201ENST00000330588 IRS2Q9Y4H2 1338 aa7.96□□□□□ -1.13
SMG1-201ENST00000330588 MAN1A2O60476 641 aa7.96□□□□□ -1.14
SMG1-201ENST00000330588 CHRNDQ07001 517 aa7.96□□□□□ -1.14
SMG1-201ENST00000330588 CCDC57Q2TAC2 916 aa7.96□□□□□ -1.14
SMG1-201ENST00000330588 MAP1SQ66K74 1059 aaPredicted RBP7.96□□□□□ -1.14
SMG1-201ENST00000330588 LMBR1LQ6UX01 489 aa7.96□□□□□ -1.14
SMG1-201ENST00000330588 VASH1Q7L8A9 365 aaPredicted RBP7.96□□□□□ -1.14
SMG1-201ENST00000330588 PPFIA3O75145 1194 aa7.95□□□□□ -1.14
SMG1-201ENST00000330588 RFC5P40937 340 aa7.95□□□□□ -1.14
SMG1-201ENST00000330588 HIRAP54198 1017 aaPredicted RBP7.95□□□□□ -1.14
SMG1-201ENST00000330588 UBE4AQ14139 1066 aa7.95□□□□□ -1.14
SMG1-201ENST00000330588 SLC4A10Q6U841 1118 aa7.95□□□□□ -1.14
SMG1-201ENST00000330588 API5Q9BZZ5 524 aaKnown RBP7.95□□□□□ -1.14
SMG1-201ENST00000330588 ARAP2Q8WZ64 1704 aa7.95□□□□□ -1.14
SMG1-201ENST00000330588 COL1A1P02452 1464 aaPredicted RBP7.94□□□□□ -1.14
SMG1-201ENST00000330588 UPP2O95045 317 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 BMP2P12643 396 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 IL1R1P14778 569 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 ECE1P42892 770 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 KIF4BQ2VIQ3 1234 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 DACT2Q5SW24 774 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 DIEXFQ68CQ4 756 aaKnown RBP7.94□□□□□ -1.14
SMG1-201ENST00000330588 LDHAL6AQ6ZMR3 332 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 ZNF804AQ7Z570 1209 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 CCDC116Q8IYX3 515 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 TRPM4Q8TD43 1214 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 KAZALD1Q96I82 304 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 CCDC85AQ96PX6 553 aaPredicted RBP7.94□□□□□ -1.14
SMG1-201ENST00000330588 USP44Q9H0E7 712 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 SMC4Q9NTJ3 1288 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 DNMT3LQ9UJW3 386 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 MROH5Q6ZUA9 1318 aa7.94□□□□□ -1.14
SMG1-201ENST00000330588 NBPF7P0C2Y1 421 aaPredicted RBP7.93□□□□□ -1.14
SMG1-201ENST00000330588 USP17L8P0C7I0 530 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 KCNJ4P48050 445 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 RARSP54136 660 aaKnown RBP7.93□□□□□ -1.14
SMG1-201ENST00000330588 HTRA3P83110 453 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 CTDSPL2Q05D32 466 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 MCM6Q14566 821 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 DEFB115Q30KQ5 88 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 TAF7LQ5H9L4 462 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 EPHA10Q5JZY3 1008 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 CST9Q5W186 159 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 PDXDC2PQ6P474 469 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 MTMR14Q8NCE2 650 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 DCPSQ96C86 337 aaKnown RBP7.93□□□□□ -1.14
SMG1-201ENST00000330588 SUCLG2Q96I99 432 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 TSEN34Q9BSV6 310 aaKnown RBP7.93□□□□□ -1.14
SMG1-201ENST00000330588 ECM29Q5VYK3 1845 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 PAPPA2Q9BXP8 1791 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 MAGEB6P1A0A0J9YX57 407 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 IPO8O15397 1037 aaKnown RBP7.93□□□□□ -1.14
SMG1-201ENST00000330588 FKBP1BP68106 108 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 INTS3Q68E01 1043 aaKnown RBP7.93□□□□□ -1.14
SMG1-201ENST00000330588 OGFOD1Q8N543 542 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 ANKRD44Q8N8A2 993 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 GPR101Q96P66 508 aaPredicted RBP7.93□□□□□ -1.14
SMG1-201ENST00000330588 BICC1Q9H694 974 aaKnown RBP7.93□□□□□ -1.14
SMG1-201ENST00000330588 CD209Q9NNX6 404 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 KCNQ5Q9NR82 932 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 RIPOR2Q9Y4F9 1068 aa7.93□□□□□ -1.14
SMG1-201ENST00000330588 FAM205AQ6ZU69 1335 aa7.92□□□□□ -1.14
SMG1-201ENST00000330588 MAP2K2P36507 400 aa7.92□□□□□ -1.14
SMG1-201ENST00000330588 MAP2K1Q02750 393 aaPredicted RBP7.92□□□□□ -1.14
SMG1-201ENST00000330588 TTLL5Q6EMB2 1281 aa7.92□□□□□ -1.14
SMG1-201ENST00000330588 Q6ZVU0 165 aa7.92□□□□□ -1.14
SMG1-201ENST00000330588 KRT26Q7Z3Y9 468 aa7.92□□□□□ -1.14
SMG1-201ENST00000330588 SAPCD2Q86UD0 394 aa7.92□□□□□ -1.14
SMG1-201ENST00000330588 TXNRD3Q86VQ6 643 aa7.92□□□□□ -1.14
SMG1-201ENST00000330588 ZBED3Q96IU2 234 aaPredicted RBP7.92□□□□□ -1.14
SMG1-201ENST00000330588 BCL11AQ9H165 835 aa7.92□□□□□ -1.14
SMG1-201ENST00000330588 MYOZ2Q9NPC6 264 aa7.92□□□□□ -1.14
SMG1-201ENST00000330588 CNNM1Q9NRU3 951 aa7.92□□□□□ -1.14
SMG1-201ENST00000330588 HDAC9Q9UKV0 1011 aa7.92□□□□□ -1.14
SMG1-201ENST00000330588 CHMP3Q9Y3E7 222 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms