RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 CNNM3Q8NE01 707 aa17.69■□□□□ 0.42
BRCC3-201ENST00000330045 EPB41L4AQ9HCS5 686 aaPredicted RBP17.69■□□□□ 0.42
BRCC3-201ENST00000330045 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.69■□□□□ 0.42
BRCC3-201ENST00000330045 DDX41Q9UJV9 622 aaKnown RBP17.69■□□□□ 0.42
BRCC3-201ENST00000330045 KCNH3Q9ULD8 1083 aa17.69■□□□□ 0.42
BRCC3-201ENST00000330045 V9GYY5 206 aaPredicted RBP17.69■□□□□ 0.42
BRCC3-201ENST00000330045 MROH5Q6ZUA9 1318 aa17.68■□□□□ 0.42
BRCC3-201ENST00000330045 UBE2Q2LH0YL09 131 aa17.68■□□□□ 0.42
BRCC3-201ENST00000330045 MAP3K12Q12852 859 aa17.68■□□□□ 0.42
BRCC3-201ENST00000330045 KRBA2Q6ZNG9 492 aa17.68■□□□□ 0.42
BRCC3-201ENST00000330045 METTL16Q86W50 562 aaKnown RBP17.68■□□□□ 0.42
BRCC3-201ENST00000330045 MAGEB6Q8N7X4 407 aa17.68■□□□□ 0.42
BRCC3-201ENST00000330045 ZNF397Q8NF99 534 aaPredicted RBP17.68■□□□□ 0.42
BRCC3-201ENST00000330045 CNNM2Q9H8M5 875 aa17.68■□□□□ 0.42
BRCC3-201ENST00000330045 DOCK2Q92608 1830 aa17.68■□□□□ 0.42
BRCC3-201ENST00000330045 MBD4O95243 580 aa17.67■□□□□ 0.42
BRCC3-201ENST00000330045 FMNL1O95466 1100 aaPredicted RBP17.67■□□□□ 0.42
BRCC3-201ENST00000330045 WASF1Q92558 559 aa17.67■□□□□ 0.42
BRCC3-201ENST00000330045 CHD4Q14839 1912 aa17.67■□□□□ 0.42
BRCC3-201ENST00000330045 TUBB4AP04350 444 aa17.67■□□□□ 0.42
BRCC3-201ENST00000330045 IFNAR1P17181 557 aa17.67■□□□□ 0.42
BRCC3-201ENST00000330045 CFAP100Q494V2 611 aa17.67■□□□□ 0.42
BRCC3-201ENST00000330045 SYT10Q6XYQ8 523 aa17.67■□□□□ 0.42
BRCC3-201ENST00000330045 FOXP4Q8IVH2 680 aaPredicted RBP17.67■□□□□ 0.42
BRCC3-201ENST00000330045 NOSTRINQ8IVI9 506 aa17.67■□□□□ 0.42
BRCC3-201ENST00000330045 KRI1Q8N9T8 703 aaKnown RBP17.67■□□□□ 0.42
BRCC3-201ENST00000330045 DPF2Q92785 391 aa17.67■□□□□ 0.42
BRCC3-201ENST00000330045 KRT23Q9C075 422 aa17.67■□□□□ 0.42
BRCC3-201ENST00000330045 SLC5A1P13866 664 aa17.66■□□□□ 0.42
BRCC3-201ENST00000330045 AKNAD1Q5T1N1 836 aa17.66■□□□□ 0.42
BRCC3-201ENST00000330045 GJD4Q96KN9 370 aaPredicted RBP17.66■□□□□ 0.42
BRCC3-201ENST00000330045 ARMT1Q9H993 441 aa17.66■□□□□ 0.42
BRCC3-201ENST00000330045 L2HGDHQ9H9P8 463 aa17.66■□□□□ 0.42
BRCC3-201ENST00000330045 PCDHA5Q9Y5H7 936 aa17.66■□□□□ 0.42
BRCC3-201ENST00000330045 TIAM2Q8IVF5 1701 aa17.66■□□□□ 0.42
BRCC3-201ENST00000330045 ERVV-1B6SEH8 477 aa17.66■□□□□ 0.42
BRCC3-201ENST00000330045 ELF2Q15723 593 aa17.66■□□□□ 0.42
BRCC3-201ENST00000330045 KMT5BQ4FZB7 885 aa17.66■□□□□ 0.42
BRCC3-201ENST00000330045 MFSD6Q6ZSS7 791 aa17.66■□□□□ 0.42
BRCC3-201ENST00000330045 TACC3Q9Y6A5 838 aa17.66■□□□□ 0.42
BRCC3-201ENST00000330045 BTBD18B2RXH4 712 aa17.65■□□□□ 0.42
BRCC3-201ENST00000330045 CCP110O43303 1012 aa17.65■□□□□ 0.42
BRCC3-201ENST00000330045 MYO1BO43795 1136 aa17.65■□□□□ 0.42
BRCC3-201ENST00000330045 CAMTA2O94983 1202 aa17.65■□□□□ 0.42
BRCC3-201ENST00000330045 RASGRF1Q13972 1273 aa17.65■□□□□ 0.42
BRCC3-201ENST00000330045 SAFBQ15424 915 aaKnown RBP eCLIP17.65■□□□□ 0.42
BRCC3-201ENST00000330045 SUSD4Q5VX71 490 aa17.65■□□□□ 0.42
BRCC3-201ENST00000330045 GSG1L2A8MUP6 293 aa17.65■□□□□ 0.42
BRCC3-201ENST00000330045 MMP1P03956 469 aa17.65■□□□□ 0.42
BRCC3-201ENST00000330045 AMIGO3Q86WK7 504 aa17.65■□□□□ 0.42
BRCC3-201ENST00000330045 ELOA2Q8IYF1 753 aaPredicted RBP17.65■□□□□ 0.42
BRCC3-201ENST00000330045 ZNF34Q8IZ26 560 aa17.65■□□□□ 0.42
BRCC3-201ENST00000330045 FANCLQ9NW38 375 aa17.65■□□□□ 0.42
BRCC3-201ENST00000330045 MORC2Q9Y6X9 1032 aaPredicted RBP17.65■□□□□ 0.42
BRCC3-201ENST00000330045 GUCY1A2P33402 732 aa17.64■□□□□ 0.42
BRCC3-201ENST00000330045 VSTM4Q8IW00 320 aa17.64■□□□□ 0.42
BRCC3-201ENST00000330045 STK11IPQ8N1F8 1099 aa17.64■□□□□ 0.42
BRCC3-201ENST00000330045 HOOK1Q9UJC3 728 aaKnown RBP17.64■□□□□ 0.42
BRCC3-201ENST00000330045 NID2Q14112 1375 aa17.64■□□□□ 0.41
BRCC3-201ENST00000330045 MDM2Q00987 491 aaPredicted RBP17.64■□□□□ 0.41
BRCC3-201ENST00000330045 RRP12Q5JTH9 1297 aaKnown RBP17.64■□□□□ 0.41
BRCC3-201ENST00000330045 SPECC1Q5M775 1068 aa17.64■□□□□ 0.41
BRCC3-201ENST00000330045 HOMER1Q86YM7 354 aa17.64■□□□□ 0.41
BRCC3-201ENST00000330045 DIS3L2Q8IYB7 885 aaKnown RBP17.64■□□□□ 0.41
BRCC3-201ENST00000330045 TRIM22Q8IYM9 498 aa17.64■□□□□ 0.41
BRCC3-201ENST00000330045 TMX1Q9H3N1 280 aa17.64■□□□□ 0.41
BRCC3-201ENST00000330045 SNAP23O00161 211 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 TOP1P11387 765 aaKnown RBP17.63■□□□□ 0.41
BRCC3-201ENST00000330045 TOB1P50616 345 aaPredicted RBP17.63■□□□□ 0.41
BRCC3-201ENST00000330045 SART3Q15020 963 aaKnown RBP17.63■□□□□ 0.41
BRCC3-201ENST00000330045 CCDC93Q567U6 631 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 STAG1Q8WVM7 1258 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 TOMM22Q9NS69 142 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 KCNJ14Q9UNX9 436 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 THSD7AQ9UPZ6 1657 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 FOXN1O15353 648 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 PRKAB2O43741 272 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 BMP6P22004 513 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 TDO2P48775 406 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 WTAPQ15007 396 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 RTN1Q16799 776 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 FBXO38Q6PIJ6 1188 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 MPHOSPH8Q99549 860 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 ZKSCAN3Q9BRR0 538 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 NACAP1Q9BZK3 213 aa17.63■□□□□ 0.41
BRCC3-201ENST00000330045 FOXP1Q9H334 677 aaPredicted RBP17.63■□□□□ 0.41
BRCC3-201ENST00000330045 GNAT2P19087 354 aa17.62■□□□□ 0.41
BRCC3-201ENST00000330045 ETF1P62495 437 aaKnown RBP17.62■□□□□ 0.41
BRCC3-201ENST00000330045 PDE4BQ07343 736 aa17.62■□□□□ 0.41
BRCC3-201ENST00000330045 RILPL1Q5EBL4 403 aa17.62■□□□□ 0.41
BRCC3-201ENST00000330045 AK7Q96M32 723 aa17.62■□□□□ 0.41
BRCC3-201ENST00000330045 SLC4A4Q9Y6R1 1079 aa17.62■□□□□ 0.41
BRCC3-201ENST00000330045 ERICH2A1L162 156 aa17.62■□□□□ 0.41
BRCC3-201ENST00000330045 TMEM232C9JQI7 657 aa17.62■□□□□ 0.41
BRCC3-201ENST00000330045 PTPREP23469 700 aa17.62■□□□□ 0.41
BRCC3-201ENST00000330045 SMARCC1Q92922 1105 aaPredicted RBP17.62■□□□□ 0.41
BRCC3-201ENST00000330045 UTP14AQ9BVJ6 771 aaKnown RBP17.62■□□□□ 0.41
BRCC3-201ENST00000330045 FBXO2Q9UK22 296 aaPredicted RBP17.62■□□□□ 0.41
BRCC3-201ENST00000330045 ZHX1Q9UKY1 873 aaPredicted RBP17.62■□□□□ 0.41
BRCC3-201ENST00000330045 POSTNQ15063 836 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms