RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 GPAA1O43292 621 aa20.25■□□□□ 0.83
CLDN6-201ENST00000328796 NOL9Q5SY16 702 aaKnown RBP20.25■□□□□ 0.83
CLDN6-201ENST00000328796 TTC22Q5TAA0 569 aa20.25■□□□□ 0.83
CLDN6-201ENST00000328796 FOXP4Q8IVH2 680 aaPredicted RBP20.25■□□□□ 0.83
CLDN6-201ENST00000328796 WNK4Q96J92 1243 aa20.25■□□□□ 0.83
CLDN6-201ENST00000328796 SEC62Q99442 399 aaKnown RBP20.25■□□□□ 0.83
CLDN6-201ENST00000328796 ELP3Q9H9T3 547 aa20.25■□□□□ 0.83
CLDN6-201ENST00000328796 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.25■□□□□ 0.83
CLDN6-201ENST00000328796 SLC4A4Q9Y6R1 1079 aa20.25■□□□□ 0.83
CLDN6-201ENST00000328796 FAM196BA6NMK8 535 aa20.24■□□□□ 0.83
CLDN6-201ENST00000328796 HLA-DOAP06340 250 aa20.24■□□□□ 0.83
CLDN6-201ENST00000328796 ZBTB48P10074 688 aaPredicted RBP20.24■□□□□ 0.83
CLDN6-201ENST00000328796 KIF23Q02241 960 aaPredicted RBP20.24■□□□□ 0.83
CLDN6-201ENST00000328796 TTC6Q86TZ1 520 aa20.24■□□□□ 0.83
CLDN6-201ENST00000328796 RILPL2Q969X0 211 aa20.24■□□□□ 0.83
CLDN6-201ENST00000328796 EHD4Q9H223 541 aa20.24■□□□□ 0.83
CLDN6-201ENST00000328796 DNAJC18Q9H819 358 aa20.24■□□□□ 0.83
CLDN6-201ENST00000328796 DOCK1Q14185 1865 aa20.23■□□□□ 0.83
CLDN6-201ENST00000328796 GSPT1P15170 499 aaKnown RBP20.23■□□□□ 0.83
CLDN6-201ENST00000328796 GJA5P36382 358 aa20.23■□□□□ 0.83
CLDN6-201ENST00000328796 MCM9Q9NXL9 1143 aa20.23■□□□□ 0.83
CLDN6-201ENST00000328796 SPDYE5A6NIY4 337 aa20.22■□□□□ 0.83
CLDN6-201ENST00000328796 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
CLDN6-201ENST00000328796 CTNND1O60716 968 aaKnown RBP20.22■□□□□ 0.83
CLDN6-201ENST00000328796 GNAT2P19087 354 aa20.22■□□□□ 0.83
CLDN6-201ENST00000328796 OPTNQ96CV9 577 aa20.22■□□□□ 0.83
CLDN6-201ENST00000328796 HELLSQ9NRZ9 838 aa20.22■□□□□ 0.83
CLDN6-201ENST00000328796 PPP4R2Q9NY27 417 aa20.22■□□□□ 0.83
CLDN6-201ENST00000328796 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.22■□□□□ 0.83
CLDN6-201ENST00000328796 ATAD5Q96QE3 1844 aa20.22■□□□□ 0.83
CLDN6-201ENST00000328796 POLR3DP05423 398 aaPredicted RBP20.21■□□□□ 0.83
CLDN6-201ENST00000328796 PLCD1P51178 756 aa20.21■□□□□ 0.83
CLDN6-201ENST00000328796 MAP2K1Q02750 393 aaPredicted RBP20.21■□□□□ 0.83
CLDN6-201ENST00000328796 SLC4A8Q2Y0W8 1093 aa20.21■□□□□ 0.83
CLDN6-201ENST00000328796 GIMAP6Q6P9H5 292 aa20.21■□□□□ 0.83
CLDN6-201ENST00000328796 ERO1BQ86YB8 467 aa20.21■□□□□ 0.83
CLDN6-201ENST00000328796 SCYL3Q8IZE3 742 aa20.21■□□□□ 0.83
CLDN6-201ENST00000328796 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
CLDN6-201ENST00000328796 WBP1LQ9NX94 342 aa20.21■□□□□ 0.83
CLDN6-201ENST00000328796 SDSP20132 328 aa20.21■□□□□ 0.83
CLDN6-201ENST00000328796 MKRN3Q13064 507 aaKnown RBP20.21■□□□□ 0.83
CLDN6-201ENST00000328796 REM2Q8IYK8 340 aaPredicted RBP20.21■□□□□ 0.83
CLDN6-201ENST00000328796 CRACR2BQ8N4Y2 399 aaPredicted RBP20.21■□□□□ 0.83
CLDN6-201ENST00000328796 DDRGK1Q96HY6 314 aa20.21■□□□□ 0.83
CLDN6-201ENST00000328796 FAM227BQ96M60 508 aa20.21■□□□□ 0.83
CLDN6-201ENST00000328796 SERPINB13Q9UIV8 391 aa20.21■□□□□ 0.83
CLDN6-201ENST00000328796 A0A0D9SFI3 127 aa20.2■□□□□ 0.82
CLDN6-201ENST00000328796 GABPAQ06546 454 aa20.2■□□□□ 0.82
CLDN6-201ENST00000328796 NMIQ13287 307 aaPredicted RBP20.2■□□□□ 0.82
CLDN6-201ENST00000328796 RRP1BQ14684 758 aaKnown RBP20.2■□□□□ 0.82
CLDN6-201ENST00000328796 TRIM34Q9BYJ4 488 aa20.2■□□□□ 0.82
CLDN6-201ENST00000328796 EPB41L4AQ9HCS5 686 aaPredicted RBP20.2■□□□□ 0.82
CLDN6-201ENST00000328796 TAOK2Q9UL54 1235 aa20.2■□□□□ 0.82
CLDN6-201ENST00000328796 PHIPQ8WWQ0 1821 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 MANSC4A6NHS7 340 aaPredicted RBP20.19■□□□□ 0.82
CLDN6-201ENST00000328796 PATL2C9JE40 543 aaKnown RBP20.19■□□□□ 0.82
CLDN6-201ENST00000328796 USP17L12C9JPN9 530 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 USP17L21D6R901 530 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 CYP2D6P10635 497 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 CAP2P40123 477 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 EVX2Q03828 476 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 PPATQ06203 517 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 PPIL2Q13356 520 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 MCMDC2Q4G0Z9 681 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 C12orf60Q5U649 245 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 TATDN1Q6P1N9 297 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 CCDC129Q6ZRS4 1044 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 OTUD5Q96G74 571 aa20.19■□□□□ 0.82
CLDN6-201ENST00000328796 HIP1O00291 1037 aa20.18■□□□□ 0.82
CLDN6-201ENST00000328796 PTPRAP18433 802 aa20.18■□□□□ 0.82
CLDN6-201ENST00000328796 TM4SF4P48230 202 aa20.18■□□□□ 0.82
CLDN6-201ENST00000328796 SBK1Q52WX2 424 aa20.18■□□□□ 0.82
CLDN6-201ENST00000328796 IFFO2Q5TF58 517 aa20.18■□□□□ 0.82
CLDN6-201ENST00000328796 CTR9Q6PD62 1173 aa20.18■□□□□ 0.82
CLDN6-201ENST00000328796 PICK1Q9NRD5 415 aa20.18■□□□□ 0.82
CLDN6-201ENST00000328796 ARPP21Q9UBL0 812 aaPredicted RBP20.18■□□□□ 0.82
CLDN6-201ENST00000328796 MYH8P13535 1937 aa20.18■□□□□ 0.82
CLDN6-201ENST00000328796 IRF6O14896 467 aa20.17■□□□□ 0.82
CLDN6-201ENST00000328796 FOXP2O15409 715 aa20.17■□□□□ 0.82
CLDN6-201ENST00000328796 HSPA1AP0DMV8 641 aaKnown RBP20.17■□□□□ 0.82
CLDN6-201ENST00000328796 HSPA1BP0DMV9 641 aaKnown RBP20.17■□□□□ 0.82
CLDN6-201ENST00000328796 SREBF2Q12772 1141 aa20.17■□□□□ 0.82
CLDN6-201ENST00000328796 SKAP1Q86WV1 359 aa20.17■□□□□ 0.82
CLDN6-201ENST00000328796 AMOTL1Q8IY63 956 aa20.17■□□□□ 0.82
CLDN6-201ENST00000328796 IFNL3Q8IZI9 196 aa20.17■□□□□ 0.82
CLDN6-201ENST00000328796 MS4A4AQ96JQ5 239 aa20.17■□□□□ 0.82
CLDN6-201ENST00000328796 CYP2D7A0A087X1C5 515 aa20.16■□□□□ 0.82
CLDN6-201ENST00000328796 TESPA1A2RU30 521 aaPredicted RBP20.16■□□□□ 0.82
CLDN6-201ENST00000328796 SHMT1P34896 483 aa20.16■□□□□ 0.82
CLDN6-201ENST00000328796 INHBEP58166 350 aa20.16■□□□□ 0.82
CLDN6-201ENST00000328796 DIAPH3Q9NSV4 1193 aa20.16■□□□□ 0.82
CLDN6-201ENST00000328796 GINM1Q9NU53 330 aa20.16■□□□□ 0.82
CLDN6-201ENST00000328796 KCNH4Q9UQ05 1017 aa20.16■□□□□ 0.82
CLDN6-201ENST00000328796 PTPRFP10586 1907 aa20.16■□□□□ 0.82
CLDN6-201ENST00000328796 SMIM22K7EJ46 135 aa20.15■□□□□ 0.82
CLDN6-201ENST00000328796 APPP05067 770 aa20.15■□□□□ 0.82
CLDN6-201ENST00000328796 GTF2A2P52657 109 aa20.15■□□□□ 0.82
CLDN6-201ENST00000328796 JAG1P78504 1218 aa20.15■□□□□ 0.82
CLDN6-201ENST00000328796 ZNF589Q86UQ0 364 aaPredicted RBP20.15■□□□□ 0.82
CLDN6-201ENST00000328796 NACAP1Q9BZK3 213 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms