RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 MCM5P33992 734 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 BECN1Q14457 450 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 INCENPQ9NQS7 918 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 ROBO3Q96MS0 1386 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 IQCA1LA6NCM1 817 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 SMIM22K7EJ46 135 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 LAMB1P07942 1786 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 MYH1P12882 1939 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 FGD1P98174 961 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 EVX2Q03828 476 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 ESR2Q92731 530 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 DYNLL2Q96FJ2 89 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 TRIM34Q9BYJ4 488 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 PI4KBQ9UBF8 816 aa32.41■■■□□ 2.78
CTDNEP1-201ENST00000318988 HSCBQ8IWL3 235 aa32.4■■■□□ 2.78
CTDNEP1-201ENST00000318988 CRACR2BQ8N4Y2 399 aaPredicted RBP32.4■■■□□ 2.78
CTDNEP1-201ENST00000318988 SERPINB13Q9UIV8 391 aa32.4■■■□□ 2.78
CTDNEP1-201ENST00000318988 ORC4O43929 436 aa32.39■■■□□ 2.78
CTDNEP1-201ENST00000318988 APOBEC3FQ8IUX4 373 aaKnown RBP32.39■■■□□ 2.78
CTDNEP1-201ENST00000318988 MB21D2Q8IYB1 491 aaPredicted RBP32.39■■■□□ 2.78
CTDNEP1-201ENST00000318988 DDX60LQ5H9U9 1706 aaKnown RBP32.39■■■□□ 2.78
CTDNEP1-201ENST00000318988 COL2A1P02458 1487 aaPredicted RBP32.38■■■□□ 2.77
CTDNEP1-201ENST00000318988 DDTLA6NHG4 134 aaPredicted RBP32.38■■■□□ 2.77
CTDNEP1-201ENST00000318988 RANBP6O60518 1105 aaKnown RBP32.38■■■□□ 2.77
CTDNEP1-201ENST00000318988 PRDM1O75626 825 aa32.38■■■□□ 2.77
CTDNEP1-201ENST00000318988 FGRP09769 529 aa32.38■■■□□ 2.77
CTDNEP1-201ENST00000318988 NT5C2P49902 561 aa32.38■■■□□ 2.77
CTDNEP1-201ENST00000318988 C16orf86Q6ZW13 317 aa32.38■■■□□ 2.77
CTDNEP1-201ENST00000318988 SNX21Q969T3 373 aa32.38■■■□□ 2.77
CTDNEP1-201ENST00000318988 DDX52Q9Y2R4 599 aaKnown RBP eCLIP32.38■■■□□ 2.77
CTDNEP1-201ENST00000318988 KDM4AO75164 1064 aa32.37■■■□□ 2.77
CTDNEP1-201ENST00000318988 MCM2P49736 904 aa32.37■■■□□ 2.77
CTDNEP1-201ENST00000318988 ANGEL2Q5VTE6 544 aaKnown RBP32.37■■■□□ 2.77
CTDNEP1-201ENST00000318988 ZNF444Q8N0Y2 327 aaPredicted RBP32.37■■■□□ 2.77
CTDNEP1-201ENST00000318988 CSRNP1Q96S65 589 aa32.37■■■□□ 2.77
CTDNEP1-201ENST00000318988 EHD4Q9H223 541 aa32.37■■■□□ 2.77
CTDNEP1-201ENST00000318988 SWAP70Q9UH65 585 aa32.37■■■□□ 2.77
CTDNEP1-201ENST00000318988 TACC3Q9Y6A5 838 aa32.37■■■□□ 2.77
CTDNEP1-201ENST00000318988 CNTNAP1P78357 1384 aa32.37■■■□□ 2.77
CTDNEP1-201ENST00000318988 ATRNL1Q5VV63 1379 aa32.37■■■□□ 2.77
CTDNEP1-201ENST00000318988 PRC1O43663 620 aa32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 EPHX2P34913 555 aa32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 CDK8P49336 464 aa32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 FOXP4Q8IVH2 680 aaPredicted RBP32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 TCEANC2Q96MN5 208 aa32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 TAOK2Q9UL54 1235 aa32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 ASTN2O75129 1339 aaPredicted RBP32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 RASA3Q14644 834 aa32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 ANKRD1Q15327 319 aa32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 USP50Q70EL3 339 aaPredicted RBP32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 SH3BP5LQ7L8J4 393 aa32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 TTC14Q96N46 770 aa32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 GGA3Q9NZ52 723 aa32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 DAXXQ9UER7 740 aaPredicted RBP32.36■■■□□ 2.77
CTDNEP1-201ENST00000318988 WDR19Q8NEZ3 1342 aa32.35■■■□□ 2.77
CTDNEP1-201ENST00000318988 HIRAP54198 1017 aaPredicted RBP32.35■■■□□ 2.77
CTDNEP1-201ENST00000318988 EXOSC10Q01780 885 aaKnown RBP32.35■■■□□ 2.77
CTDNEP1-201ENST00000318988 CHST3Q7LGC8 479 aa32.35■■■□□ 2.77
CTDNEP1-201ENST00000318988 ZSWIM5Q9P217 1185 aa32.35■■■□□ 2.77
CTDNEP1-201ENST00000318988 SART3Q15020 963 aaKnown RBP32.34■■■□□ 2.77
CTDNEP1-201ENST00000318988 SLC44A5Q8NCS7 719 aa32.34■■■□□ 2.77
CTDNEP1-201ENST00000318988 TMEM39BQ9GZU3 492 aa32.34■■■□□ 2.77
CTDNEP1-201ENST00000318988 AK2P54819 239 aa32.33■■■□□ 2.77
CTDNEP1-201ENST00000318988 COL9A3Q14050 684 aaPredicted RBP32.33■■■□□ 2.77
CTDNEP1-201ENST00000318988 Q6ZUG5 572 aa32.33■■■□□ 2.77
CTDNEP1-201ENST00000318988 ALDH8A1Q9H2A2 487 aaPredicted RBP32.33■■■□□ 2.77
CTDNEP1-201ENST00000318988 TSPY2A6NKD2 308 aa32.32■■■□□ 2.76
CTDNEP1-201ENST00000318988 GABPAQ06546 454 aa32.32■■■□□ 2.76
CTDNEP1-201ENST00000318988 CYB5R4Q7L1T6 521 aa32.32■■■□□ 2.76
CTDNEP1-201ENST00000318988 UBAC1Q9BSL1 405 aa32.32■■■□□ 2.76
CTDNEP1-201ENST00000318988 LRRC2Q9BYS8 371 aa32.32■■■□□ 2.76
CTDNEP1-201ENST00000318988 ERICH2A1L162 156 aa32.31■■■□□ 2.76
CTDNEP1-201ENST00000318988 NOL8Q76FK4 1167 aaKnown RBP32.31■■■□□ 2.76
CTDNEP1-201ENST00000318988 IQCA1Q86XH1 822 aa32.31■■■□□ 2.76
CTDNEP1-201ENST00000318988 DCPSQ96C86 337 aaKnown RBP32.31■■■□□ 2.76
CTDNEP1-201ENST00000318988 TMEM87BQ96K49 555 aa32.31■■■□□ 2.76
CTDNEP1-201ENST00000318988 DEFB129Q9H1M3 183 aa32.31■■■□□ 2.76
CTDNEP1-201ENST00000318988 PITPNM2Q9BZ72 1349 aa32.31■■■□□ 2.76
CTDNEP1-201ENST00000318988 TBC1D2Q9BYX2 928 aa32.31■■■□□ 2.76
CTDNEP1-201ENST00000318988 TAF1DQ9H5J8 278 aaPredicted RBP32.31■■■□□ 2.76
CTDNEP1-201ENST00000318988 HERC5Q9UII4 1024 aaKnown RBP32.31■■■□□ 2.76
CTDNEP1-201ENST00000318988 CD2BP2O95400 341 aaKnown RBP32.3■■■□□ 2.76
CTDNEP1-201ENST00000318988 TSPY3P0CV98 308 aa32.3■■■□□ 2.76
CTDNEP1-201ENST00000318988 TSPY8P0CW00 308 aa32.3■■■□□ 2.76
CTDNEP1-201ENST00000318988 ANTXR2P58335 489 aa32.3■■■□□ 2.76
CTDNEP1-201ENST00000318988 PNMA8AQ86V59 439 aaPredicted RBP32.3■■■□□ 2.76
CTDNEP1-201ENST00000318988 SCAF8Q9UPN6 1271 aaKnown RBP32.3■■■□□ 2.76
CTDNEP1-201ENST00000318988 IFIT3O14879 490 aaKnown RBP32.29■■■□□ 2.76
CTDNEP1-201ENST00000318988 RASA1P20936 1047 aa32.29■■■□□ 2.76
CTDNEP1-201ENST00000318988 TFAP4Q01664 338 aa32.29■■■□□ 2.76
CTDNEP1-201ENST00000318988 FAM47AQ5JRC9 791 aa32.29■■■□□ 2.76
CTDNEP1-201ENST00000318988 MTA3Q9BTC8 594 aa32.29■■■□□ 2.76
CTDNEP1-201ENST00000318988 EAPPQ56P03 285 aaPredicted RBP32.28■■■□□ 2.76
CTDNEP1-201ENST00000318988 TMEM67Q5HYA8 995 aa32.28■■■□□ 2.76
CTDNEP1-201ENST00000318988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.28■■■□□ 2.76
CTDNEP1-201ENST00000318988 LIMCH1Q9UPQ0 1083 aa32.28■■■□□ 2.76
CTDNEP1-201ENST00000318988 PPP2R3BQ9Y5P8 575 aa32.28■■■□□ 2.76
CTDNEP1-201ENST00000318988 K7ELQ4 463 aaPredicted RBP32.27■■■□□ 2.76
CTDNEP1-201ENST00000318988 METTL16Q86W50 562 aaKnown RBP32.27■■■□□ 2.76
CTDNEP1-201ENST00000318988 ZC3H15Q8WU90 426 aaKnown RBP32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms