RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 PICALMQ13492 652 aa21.19■□□□□ 0.98
UBE2N-201ENST00000318066 WHAMMP3Q1A5X7 153 aa21.19■□□□□ 0.98
UBE2N-201ENST00000318066 IBTKQ9P2D0 1353 aaPredicted RBP21.19■□□□□ 0.98
UBE2N-201ENST00000318066 TCOF1Q13428 1488 aaKnown RBP21.19■□□□□ 0.98
UBE2N-201ENST00000318066 SLC8A3P57103 927 aa21.19■□□□□ 0.98
UBE2N-201ENST00000318066 CABS1Q96KC9 395 aa21.19■□□□□ 0.98
UBE2N-201ENST00000318066 NFE2L3Q9Y4A8 694 aa21.19■□□□□ 0.98
UBE2N-201ENST00000318066 ZMYM4Q5VZL5 1548 aa21.18■□□□□ 0.98
UBE2N-201ENST00000318066 KIF3CO14782 793 aa21.18■□□□□ 0.98
UBE2N-201ENST00000318066 NAA25Q14CX7 972 aa21.18■□□□□ 0.98
UBE2N-201ENST00000318066 PUM3Q15397 648 aaKnown RBP21.18■□□□□ 0.98
UBE2N-201ENST00000318066 SLC4A8Q2Y0W8 1093 aa21.18■□□□□ 0.98
UBE2N-201ENST00000318066 GNA14O95837 355 aa21.18■□□□□ 0.98
UBE2N-201ENST00000318066 CHRNA2Q15822 529 aa21.18■□□□□ 0.98
UBE2N-201ENST00000318066 UTP14CQ5TAP6 766 aaKnown RBP21.18■□□□□ 0.98
UBE2N-201ENST00000318066 BCAP29Q9UHQ4 241 aa21.18■□□□□ 0.98
UBE2N-201ENST00000318066 LMBRD1Q9NUN5 540 aa21.18■□□□□ 0.98
UBE2N-201ENST00000318066 CPSF2Q9P2I0 782 aaKnown RBP21.18■□□□□ 0.98
UBE2N-201ENST00000318066 BRD1O95696 1058 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 MIGA1Q8NAN2 632 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 IP6K1Q92551 441 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 SIRT1Q96EB6 747 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 EYA1Q99502 592 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 WWC3Q9ULE0 1092 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 PCDH11XQ9BZA7 1347 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 PCDH11YQ9BZA8 1340 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 COL17A1Q9UMD9 1497 aaPredicted RBP21.17■□□□□ 0.98
UBE2N-201ENST00000318066 RASSF2P50749 326 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 MAST3O60307 1309 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 PER1O15534 1290 aaPredicted RBP21.17■□□□□ 0.98
UBE2N-201ENST00000318066 POSTNQ15063 836 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 VPS52Q8N1B4 723 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.17■□□□□ 0.98
UBE2N-201ENST00000318066 POLR2DO15514 142 aaKnown RBP21.17■□□□□ 0.98
UBE2N-201ENST00000318066 STK10O94804 968 aaKnown RBP21.17■□□□□ 0.98
UBE2N-201ENST00000318066 NFATC2IPQ8NCF5 419 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 RAB17Q9H0T7 212 aa21.17■□□□□ 0.98
UBE2N-201ENST00000318066 NONOQ15233 471 aaKnown RBP eCLIP21.16■□□□□ 0.984e-7■■■■□ 19.7
UBE2N-201ENST00000318066 PCK1P35558 622 aa21.16■□□□□ 0.98
UBE2N-201ENST00000318066 DSCC1Q9BVC3 393 aa21.16■□□□□ 0.98
UBE2N-201ENST00000318066 VCXQ9H320 206 aa21.16■□□□□ 0.98
UBE2N-201ENST00000318066 TNNQ9UQP3 1299 aa21.16■□□□□ 0.98
UBE2N-201ENST00000318066 SHANK2Q9UPX8 1470 aa21.16■□□□□ 0.98
UBE2N-201ENST00000318066 HPDP32754 393 aaPredicted RBP21.16■□□□□ 0.98
UBE2N-201ENST00000318066 CCDC62Q6P9F0 684 aa21.16■□□□□ 0.98
UBE2N-201ENST00000318066 PHLDB2Q86SQ0 1253 aa21.16■□□□□ 0.98
UBE2N-201ENST00000318066 PSMD1Q99460 953 aa21.16■□□□□ 0.98
UBE2N-201ENST00000318066 IGSF3O75054 1194 aa21.16■□□□□ 0.98
UBE2N-201ENST00000318066 MCTP2Q6DN12 878 aa21.16■□□□□ 0.98
UBE2N-201ENST00000318066 AGTPBP1Q9UPW5 1226 aa21.16■□□□□ 0.98
UBE2N-201ENST00000318066 ELF2Q15723 593 aa21.15■□□□□ 0.98
UBE2N-201ENST00000318066 CHL1O00533 1208 aa21.15■□□□□ 0.98
UBE2N-201ENST00000318066 TRIML1Q8N9V2 468 aa21.15■□□□□ 0.98
UBE2N-201ENST00000318066 ZNF518AQ6AHZ1 1483 aa21.15■□□□□ 0.98
UBE2N-201ENST00000318066 ZNF500O60304 480 aaPredicted RBP21.15■□□□□ 0.98
UBE2N-201ENST00000318066 PPM1FP49593 454 aaPredicted RBP21.15■□□□□ 0.98
UBE2N-201ENST00000318066 RPS6KA1Q15418 735 aa21.15■□□□□ 0.98
UBE2N-201ENST00000318066 VSIG1Q86XK7 387 aa21.15■□□□□ 0.98
UBE2N-201ENST00000318066 B4E1Z4 1266 aa21.15■□□□□ 0.98
UBE2N-201ENST00000318066 BCRP11274 1271 aa21.15■□□□□ 0.98
UBE2N-201ENST00000318066 RAPGEF6Q8TEU7 1601 aa21.14■□□□□ 0.98
UBE2N-201ENST00000318066 BIRC3Q13489 604 aa21.14■□□□□ 0.98
UBE2N-201ENST00000318066 DDB1Q16531 1140 aa21.14■□□□□ 0.98
UBE2N-201ENST00000318066 ADALQ6DHV7 355 aa21.14■□□□□ 0.98
UBE2N-201ENST00000318066 ZNF219Q9P2Y4 722 aaPredicted RBP21.14■□□□□ 0.98
UBE2N-201ENST00000318066 CEP85LQ5SZL2 805 aa21.14■□□□□ 0.97
UBE2N-201ENST00000318066 PHACTR3Q96KR7 559 aa21.14■□□□□ 0.97
UBE2N-201ENST00000318066 A0A1W2PP64 1363 aa21.14■□□□□ 0.97
UBE2N-201ENST00000318066 MCUR1Q96AQ8 359 aa21.14■□□□□ 0.97
UBE2N-201ENST00000318066 MAP7Q14244 749 aa21.14■□□□□ 0.97
UBE2N-201ENST00000318066 RNF123Q5XPI4 1314 aa21.14■□□□□ 0.97
UBE2N-201ENST00000318066 HMGB1P1B2RPK0 211 aaPredicted RBP21.13■□□□□ 0.97
UBE2N-201ENST00000318066 TRIM58Q8NG06 486 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 PTPRKQ15262 1439 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 BACH1O14867 736 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 ZWINTO95229 277 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 LRWD1Q9UFC0 647 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 E7EVH7 732 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 PIK3AP1Q6ZUJ8 805 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 CCT6BQ92526 530 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 KIAA0232Q92628 1395 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 CASQ2O14958 399 aaPredicted RBP21.13■□□□□ 0.97
UBE2N-201ENST00000318066 RBM26Q5T8P6 1007 aaKnown RBP21.13■□□□□ 0.97
UBE2N-201ENST00000318066 KRT40Q6A162 431 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 P3H4Q92791 437 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 CDCA7Q9BWT1 371 aaPredicted RBP21.13■□□□□ 0.97
UBE2N-201ENST00000318066 NT5C3AQ9H0P0 336 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 RTCBQ9Y3I0 505 aaKnown RBP21.13■□□□□ 0.97
UBE2N-201ENST00000318066 SH3TC1Q8TE82 1336 aa21.13■□□□□ 0.97
UBE2N-201ENST00000318066 WDR7Q9Y4E6 1490 aa21.12■□□□□ 0.97
UBE2N-201ENST00000318066 GPAA1O43292 621 aa21.12■□□□□ 0.97
UBE2N-201ENST00000318066 SBNO1A3KN83 1393 aa21.12■□□□□ 0.97
UBE2N-201ENST00000318066 KRT5P13647 590 aa21.12■□□□□ 0.97
UBE2N-201ENST00000318066 APBA1Q02410 837 aa21.12■□□□□ 0.97
UBE2N-201ENST00000318066 HHATQ5VTY9 493 aa21.12■□□□□ 0.97
UBE2N-201ENST00000318066 TEX11Q8IYF3 940 aa21.12■□□□□ 0.97
UBE2N-201ENST00000318066 V9GY48 417 aaPredicted RBP21.12■□□□□ 0.97
UBE2N-201ENST00000318066 KLHL30Q0D2K2 578 aa21.12■□□□□ 0.97
UBE2N-201ENST00000318066 RPUSD2Q8IZ73 545 aaKnown RBP21.12■□□□□ 0.97
UBE2N-201ENST00000318066 RNF40O75150 1001 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms