RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 KCND1Q9NSA2 647 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 ZNF215Q9UL58 517 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-201ENST00000317147 RTL9Q8NET4 1388 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 MYOM1P52179 1685 aa5.05□□□□□ -1.6
CNOT1-201ENST00000317147 CCDC169A6NNP5 214 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 PRC1O43663 620 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 HLTFQ14527 1009 aaKnown RBP eCLIP5.04□□□□□ -1.6
CNOT1-201ENST00000317147 C8orf74Q6P047 294 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 SUGP1Q8IWZ8 645 aaKnown RBP5.04□□□□□ -1.6
CNOT1-201ENST00000317147 SAAL1Q96ER3 474 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 LTV1Q96GA3 475 aaPredicted RBP5.04□□□□□ -1.6
CNOT1-201ENST00000317147 MAGI2Q86UL8 1455 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 GOLGA8QA0A0J9YX86 632 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 GOLGA8OA6NCC3 632 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 GOLGA8NF8WBI6 632 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 N4BP3O15049 544 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 CALM1P0DP23 149 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 CALM2P0DP24 149 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 CALM3P0DP25 149 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 PLEKHO1Q53GL0 409 aaPredicted RBP5.04□□□□□ -1.6
CNOT1-201ENST00000317147 SRGAP1Q7Z6B7 1085 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 LEO1Q8WVC0 666 aaPredicted RBP5.04□□□□□ -1.6
CNOT1-201ENST00000317147 SCLT1Q96NL6 688 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 OLFM3Q96PB7 478 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 CCDC68Q9H2F9 335 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 MIS18AQ9NYP9 233 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 RIMS2Q9UQ26 1411 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 ABCC10Q5T3U5 1492 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 NCBP1Q09161 790 aaKnown RBP5.04□□□□□ -1.6
CNOT1-201ENST00000317147 LARP1Q6PKG0 1096 aaKnown RBP5.04□□□□□ -1.6
CNOT1-201ENST00000317147 AACSQ86V21 672 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 CCDC42Q96M95 316 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 PANX2Q96RD6 677 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 FERMT1Q9BQL6 677 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 CENPKQ9BS16 269 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 MRGBPQ9NV56 204 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.04□□□□□ -1.61e-6■■□□□ 13.5
CNOT1-201ENST00000317147 CDC23Q9UJX2 597 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 SAR1BQ9Y6B6 198 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 AHCTF1Q8WYP5 2266 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 ATP7AQ04656 1500 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 MACROD2A1Z1Q3 448 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 RAB11FIP4Q86YS3 637 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 FERMT2Q96AC1 680 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 NOX5Q96PH1 765 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 CUL9Q8IWT3 2517 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 PXDNLA1KZ92 1463 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 MYO3AQ8NEV4 1616 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 NEXMIFQ5QGS0 1516 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 SKIP12755 728 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 STK3Q13188 491 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 NEK1Q96PY6 1258 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 KRT23Q9C075 422 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 WWC3Q9ULE0 1092 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 KIAA1217Q5T5P2 1943 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 DTNBO60941 627 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 HSPA6P17066 643 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 GNAT2P19087 354 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 PCK1P35558 622 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 MKRN3Q13064 507 aaKnown RBP5.04□□□□□ -1.6
CNOT1-201ENST00000317147 NR1H3Q13133 447 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 CFAP157Q5JU67 520 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 ADALQ6DHV7 355 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 GBP5Q96PP8 586 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 UBAC1Q9BSL1 405 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 IKBKGQ9Y6K9 419 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.04□□□□□ -1.6
CNOT1-201ENST00000317147 ZC3H13Q5T200 1668 aaKnown RBP5.04□□□□□ -1.6
CNOT1-201ENST00000317147 AKR1B10O60218 316 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 CUTAO60888 179 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 NEBLO76041 1014 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 NNTQ13423 1086 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 CCDC96Q2M329 555 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 LRRC23Q53EV4 343 aaPredicted RBP5.04□□□□□ -1.6
CNOT1-201ENST00000317147 TBC1D22AQ8WUA7 517 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 DRC1Q96MC2 740 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 CEP63Q96MT8 703 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 IL1RAPL2Q9NP60 686 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 TCP11L1Q9NUJ3 509 aa5.04□□□□□ -1.6
CNOT1-201ENST00000317147 RWDD2BP57060 319 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 IRX5P78411 483 aaPredicted RBP5.03□□□□□ -1.6
CNOT1-201ENST00000317147 INTS8Q75QN2 995 aaKnown RBP5.03□□□□□ -1.6
CNOT1-201ENST00000317147 MAIP1Q8WWC4 291 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 NAP1L4Q99733 375 aaKnown RBP5.03□□□□□ -1.6
CNOT1-201ENST00000317147 MTUS1Q9ULD2 1270 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 UGGT1Q9NYU2 1555 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 SBNO1A3KN83 1393 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 EP400Q96L91 3159 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 NLRP12P59046 1061 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 PRPF40BQ6NWY9 871 aaKnown RBP5.03□□□□□ -1.6
CNOT1-201ENST00000317147 PPP1R2P3Q6NXS1 205 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 IQUBQ8NA54 791 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 NCOA7Q8NI08 942 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 CCDC43Q96MW1 224 aaKnown RBP5.03□□□□□ -1.6
CNOT1-201ENST00000317147 GLT8D2Q9H1C3 349 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 ANO9A1A5B4 782 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 CREB3O43889 395 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 TEX11Q8IYF3 940 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 AOPEPQ8N6M6 819 aa5.03□□□□□ -1.6
CNOT1-201ENST00000317147 HOOK2Q96ED9 719 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms