RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDC42-201ENST00000315554 ARMT1Q9H993 441 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 PLA2G2EQ9NZK7 142 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 ABT1Q9ULW3 272 aaKnown RBP9.5□□□□□ -0.89
CDC42-201ENST00000315554 ECM29Q5VYK3 1845 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 SSC5DA1L4H1 1573 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 RNF113AO15541 343 aaKnown RBP9.49□□□□□ -0.89
CDC42-201ENST00000315554 MBD4O95243 580 aa9.49□□□□□ -0.89
CDC42-201ENST00000315554 TNNI2P48788 182 aa9.49□□□□□ -0.89
CDC42-201ENST00000315554 ZSCAN29Q8IWY8 852 aaPredicted RBP9.49□□□□□ -0.89
CDC42-201ENST00000315554 RIOK1Q9BRS2 568 aaKnown RBP9.49□□□□□ -0.89
CDC42-201ENST00000315554 PUS7LQ9H0K6 701 aaKnown RBP9.49□□□□□ -0.89
CDC42-201ENST00000315554 GBA2Q9HCG7 927 aaPredicted RBP9.49□□□□□ -0.89
CDC42-201ENST00000315554 SAP30BPQ9UHR5 308 aaKnown RBP9.49□□□□□ -0.89
CDC42-201ENST00000315554 RFX7Q2KHR2 1363 aa9.49□□□□□ -0.89
CDC42-201ENST00000315554 DDTLA6NHG4 134 aaPredicted RBP9.48□□□□□ -0.89
CDC42-201ENST00000315554 UBE2Q2LH0YL09 131 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 M0R2C6 588 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 PRKAB2O43741 272 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 GSPT1P15170 499 aaKnown RBP9.48□□□□□ -0.89
CDC42-201ENST00000315554 USP5P45974 858 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 PPP4CP60510 307 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 GRM1Q13255 1194 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 TTC22Q5TAA0 569 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 ZSCAN25Q6NSZ9 544 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
CDC42-201ENST00000315554 MIGA2Q7L4E1 593 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 SH3BP5LQ7L8J4 393 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 FAM151AQ8WW52 585 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 EVI5LQ96CN4 794 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 SEC62Q99442 399 aaKnown RBP9.48□□□□□ -0.89
CDC42-201ENST00000315554 IDI2Q9BXS1 227 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 OSBPL3Q9H4L5 887 aa9.48□□□□□ -0.89
CDC42-201ENST00000315554 MKRN1Q9UHC7 482 aaKnown RBP9.48□□□□□ -0.89
CDC42-201ENST00000315554 FLT1P17948 1338 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 FAM196BA6NMK8 535 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 NF2P35240 595 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 HUNKP57058 714 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 LSM11P83369 360 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDC42-201ENST00000315554 UBE3CQ15386 1083 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 FKBP1CQ5VVH2 108 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 ERICH6BQ5W0A0 696 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 CCDC129Q6ZRS4 1044 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 FAM83AQ86UY5 434 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 C2orf69Q8N8R5 385 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 SDR42E1Q8WUS8 393 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 OSBP2Q969R2 916 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 ANGEL1Q9UNK9 670 aaKnown RBP9.47□□□□□ -0.89
CDC42-201ENST00000315554 PPP2R3BQ9Y5P8 575 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 ENTPD3O75355 529 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 SUPT20HL1Q3ZLR7 823 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 APPBP2Q92624 585 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 AIDAQ96BJ3 306 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 FAM227BQ96M60 508 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 CSRNP1Q96S65 589 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 CRNKL1Q9BZJ0 848 aaKnown RBP9.47□□□□□ -0.89
CDC42-201ENST00000315554 OSBPL5Q9H0X9 879 aaPredicted RBP9.47□□□□□ -0.89
CDC42-201ENST00000315554 TLL2Q9Y6L7 1015 aa9.47□□□□□ -0.89
CDC42-201ENST00000315554 TRPM7Q96QT4 1865 aa9.46□□□□□ -0.89
CDC42-201ENST00000315554 A0A0D9SFI3 127 aa9.46□□□□□ -0.9
CDC42-201ENST00000315554 IGSF3O75054 1194 aa9.46□□□□□ -0.9
CDC42-201ENST00000315554 USP2O75604 605 aaPredicted RBP9.46□□□□□ -0.9
CDC42-201ENST00000315554 CYP2D6P10635 497 aa9.46□□□□□ -0.9
CDC42-201ENST00000315554 SDSP20132 328 aa9.46□□□□□ -0.9
CDC42-201ENST00000315554 NMIQ13287 307 aaPredicted RBP9.46□□□□□ -0.9
CDC42-201ENST00000315554 ZMYM1Q5SVZ6 1142 aa9.46□□□□□ -0.9
CDC42-201ENST00000315554 CYP4F22Q6NT55 531 aa9.46□□□□□ -0.9
CDC42-201ENST00000315554 SAPCD2Q86UD0 394 aa9.46□□□□□ -0.9
CDC42-201ENST00000315554 CLMNQ96JQ2 1002 aa9.46□□□□□ -0.9
CDC42-201ENST00000315554 PALD1Q9ULE6 856 aa9.46□□□□□ -0.9
CDC42-201ENST00000315554 SLC4A4Q9Y6R1 1079 aa9.46□□□□□ -0.9
CDC42-201ENST00000315554 MYH7P12883 1935 aa9.45□□□□□ -0.9
CDC42-201ENST00000315554 RPAP1Q9BWH6 1393 aaPredicted RBP9.45□□□□□ -0.9
CDC42-201ENST00000315554 CYP2D7A0A087X1C5 515 aa9.45□□□□□ -0.9
CDC42-201ENST00000315554 SMIM22K7EJ46 135 aa9.45□□□□□ -0.9
CDC42-201ENST00000315554 GPAA1O43292 621 aa9.45□□□□□ -0.9
CDC42-201ENST00000315554 PPP1R12BO60237 982 aaPredicted RBP9.45□□□□□ -0.9
CDC42-201ENST00000315554 ZFYP08048 801 aaPredicted RBP9.45□□□□□ -0.9
CDC42-201ENST00000315554 LRRFIP1Q32MZ4 808 aaKnown RBP9.45□□□□□ -0.9
CDC42-201ENST00000315554 TMEM92Q6UXU6 159 aa9.45□□□□□ -0.9
CDC42-201ENST00000315554 ARMC9Q7Z3E5 817 aa9.45□□□□□ -0.9
CDC42-201ENST00000315554 STRBPQ96SI9 672 aaKnown RBP9.45□□□□□ -0.9
CDC42-201ENST00000315554 HCSTQ9UBK5 93 aa9.45□□□□□ -0.9
CDC42-201ENST00000315554 CDK5RAP2Q96SN8 1893 aa9.44□□□□□ -0.9
CDC42-201ENST00000315554 IREB2P48200 963 aaKnown RBP9.44□□□□□ -0.9
CDC42-201ENST00000315554 DEFB115Q30KQ5 88 aa9.44□□□□□ -0.9
CDC42-201ENST00000315554 TMED8Q6PL24 325 aaPredicted RBP9.44□□□□□ -0.9
CDC42-201ENST00000315554 CWC27Q6UX04 472 aaKnown RBP9.44□□□□□ -0.9
CDC42-201ENST00000315554 ZKSCAN4Q969J2 545 aaPredicted RBP9.44□□□□□ -0.9
CDC42-201ENST00000315554 WRNIP1Q96S55 665 aa9.44□□□□□ -0.9
CDC42-201ENST00000315554 DCP1AQ9NPI6 582 aaPredicted RBP9.44□□□□□ -0.9
CDC42-201ENST00000315554 DIAPH3Q9NSV4 1193 aa9.44□□□□□ -0.9
CDC42-201ENST00000315554 MCM9Q9NXL9 1143 aa9.44□□□□□ -0.9
CDC42-201ENST00000315554 PAPPA2Q9BXP8 1791 aa9.44□□□□□ -0.9
CDC42-201ENST00000315554 AK9Q5TCS8 1911 aa9.44□□□□□ -0.9
CDC42-201ENST00000315554 ATRNL1Q5VV63 1379 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 RASSF10A6NK89 507 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 AOC2O75106 756 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 APPP05067 770 aa9.43□□□□□ -0.9
CDC42-201ENST00000315554 POLR3DP05423 398 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms