RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 OLFM4Q6UX06 510 aa14.42□□□□□ -0.1
RNF4-201ENST00000314289 LINC00301Q8NCQ3 95 aa14.42□□□□□ -0.1
RNF4-201ENST00000314289 DDX19AQ9NUU7 478 aaKnown RBP14.42□□□□□ -0.1
RNF4-201ENST00000314289 USP17L8P0C7I0 530 aa14.41□□□□□ -0.1
RNF4-201ENST00000314289 ATP2B1P20020 1258 aa14.41□□□□□ -0.1
RNF4-201ENST00000314289 DDR1Q08345 913 aa14.41□□□□□ -0.1
RNF4-201ENST00000314289 SNW1Q13573 536 aaKnown RBP14.41□□□□□ -0.1
RNF4-201ENST00000314289 AEBP2Q6ZN18 517 aaPredicted RBP14.41□□□□□ -0.1
RNF4-201ENST00000314289 ZNF654Q8IZM8 581 aa14.41□□□□□ -0.1
RNF4-201ENST00000314289 CDKL5O76039 1030 aa14.41□□□□□ -0.1
RNF4-201ENST00000314289 UFL1O94874 794 aa14.41□□□□□ -0.1
RNF4-201ENST00000314289 SSRP1Q08945 709 aaKnown RBP14.41□□□□□ -0.1
RNF4-201ENST00000314289 CCDC73Q6ZRK6 1079 aa14.41□□□□□ -0.1
RNF4-201ENST00000314289 ENAHQ8N8S7 591 aaPredicted RBP14.41□□□□□ -0.1
RNF4-201ENST00000314289 ESR2Q92731 530 aa14.41□□□□□ -0.1
RNF4-201ENST00000314289 RNF41Q9H4P4 317 aaPredicted RBP14.41□□□□□ -0.1
RNF4-201ENST00000314289 DCP1AQ9NPI6 582 aaPredicted RBP14.41□□□□□ -0.1
RNF4-201ENST00000314289 MTMR7Q9Y216 660 aa14.41□□□□□ -0.1
RNF4-201ENST00000314289 LY75O60449 1722 aa14.41□□□□□ -0.1
RNF4-201ENST00000314289 NDUFA8P51970 172 aa14.4□□□□□ -0.1
RNF4-201ENST00000314289 C17orf53Q8N3J3 647 aaPredicted RBP14.4□□□□□ -0.1
RNF4-201ENST00000314289 MCM9Q9NXL9 1143 aa14.4□□□□□ -0.1
RNF4-201ENST00000314289 BTBD18B2RXH4 712 aa14.4□□□□□ -0.1
RNF4-201ENST00000314289 SPC24Q8NBT2 197 aa14.4□□□□□ -0.1
RNF4-201ENST00000314289 RTEL1Q9NZ71 1219 aa14.4□□□□□ -0.1
RNF4-201ENST00000314289 SPTLC2O15270 562 aa14.4□□□□□ -0.1
RNF4-201ENST00000314289 TRIM29Q14134 588 aa14.4□□□□□ -0.1
RNF4-201ENST00000314289 TXNRD1Q16881 649 aa14.4□□□□□ -0.1
RNF4-201ENST00000314289 FANCBQ8NB91 859 aa14.4□□□□□ -0.1
RNF4-201ENST00000314289 MYH15Q9Y2K3 1946 aa14.4□□□□□ -0.1
RNF4-201ENST00000314289 COL24A1Q17RW2 1714 aa14.39□□□□□ -0.11
RNF4-201ENST00000314289 DYNLL2Q96FJ2 89 aa14.39□□□□□ -0.11
RNF4-201ENST00000314289 KINO60870 393 aaKnown RBP14.39□□□□□ -0.11
RNF4-201ENST00000314289 LDHBP07195 334 aaKnown RBP14.39□□□□□ -0.11
RNF4-201ENST00000314289 ANO1Q5XXA6 986 aa14.39□□□□□ -0.11
RNF4-201ENST00000314289 SH3RF3Q8TEJ3 882 aaPredicted RBP14.39□□□□□ -0.11
RNF4-201ENST00000314289 ZSCAN10Q96SZ4 725 aaPredicted RBP14.39□□□□□ -0.11
RNF4-201ENST00000314289 CRNKL1Q9BZJ0 848 aaKnown RBP14.39□□□□□ -0.11
RNF4-201ENST00000314289 CBX8Q9HC52 389 aa14.39□□□□□ -0.11
RNF4-201ENST00000314289 RIMBP2O15034 1052 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 SEMA3EO15041 775 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 WDHD1O75717 1129 aaPredicted RBP14.38□□□□□ -0.11
RNF4-201ENST00000314289 PLEKHA8P1O95397 391 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 ST5P78524 1137 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 NR5A1Q13285 461 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 SEC23AQ15436 765 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 SPECC1Q5M775 1068 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 IFIT1BQ5T764 474 aaKnown RBP14.38□□□□□ -0.11
RNF4-201ENST00000314289 CLIC6Q96NY7 704 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 TTC12Q9H892 705 aaPredicted RBP14.38□□□□□ -0.11
RNF4-201ENST00000314289 SAP30BPQ9UHR5 308 aaKnown RBP14.38□□□□□ -0.11
RNF4-201ENST00000314289 XDHP47989 1333 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 IRS2Q9Y4H2 1338 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 RGL2O15211 777 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 BRIP1Q9BX63 1249 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 C6orf229H3BNL8 230 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 FMNL1O95466 1100 aaPredicted RBP14.38□□□□□ -0.11
RNF4-201ENST00000314289 USP5P45974 858 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 FAM160A1Q05DH4 1040 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 MSL1Q68DK7 614 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 ISM2Q6H9L7 571 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 C11orf57Q6ZUT1 292 aaPredicted RBP14.38□□□□□ -0.11
RNF4-201ENST00000314289 BRAPQ7Z569 592 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 ENGASEQ8NFI3 743 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 FAM200AQ8TCP9 573 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 OXER1Q8TDS5 423 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 MRPS27Q92552 414 aaKnown RBP14.38□□□□□ -0.11
RNF4-201ENST00000314289 SDF4Q9BRK5 362 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 PRDM4Q9UKN5 801 aa14.38□□□□□ -0.11
RNF4-201ENST00000314289 IFNAR1P17181 557 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 TRIM22Q8IYM9 498 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 CRACR2BQ8N4Y2 399 aaPredicted RBP14.37□□□□□ -0.11
RNF4-201ENST00000314289 SLC44A5Q8NCS7 719 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 BIN1O00499 593 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 ZNF165P49910 485 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 ZNF827Q17R98 1081 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 ADALQ6DHV7 355 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 MTERF4Q7Z6M4 381 aaKnown RBP14.37□□□□□ -0.11
RNF4-201ENST00000314289 NBPF11Q86T75 865 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 TGFBRAP1Q8WUH2 860 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.37□□□□□ -0.11
RNF4-201ENST00000314289 POLR3EQ9NVU0 708 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 VPS54Q9P1Q0 977 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 POLLQ9UGP5 575 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 ANAPC4Q9UJX5 808 aa14.37□□□□□ -0.11
RNF4-201ENST00000314289 MROH7-TTC4A0A0A0MT08 1334 aa14.36□□□□□ -0.11
RNF4-201ENST00000314289 UVSSAQ2YD98 709 aa14.36□□□□□ -0.11
RNF4-201ENST00000314289 IQCA1Q86XH1 822 aa14.36□□□□□ -0.11
RNF4-201ENST00000314289 MAPKAPK5Q8IW41 473 aa14.36□□□□□ -0.11
RNF4-201ENST00000314289 DIS3L2Q8IYB7 885 aaKnown RBP14.36□□□□□ -0.11
RNF4-201ENST00000314289 FAM205CA6NFA0 338 aa14.36□□□□□ -0.11
RNF4-201ENST00000314289 TDRD7Q8NHU6 1098 aaKnown RBP14.36□□□□□ -0.11
RNF4-201ENST00000314289 SHISA4Q96DD7 197 aa14.36□□□□□ -0.11
RNF4-201ENST00000314289 LEMD3Q9Y2U8 911 aa14.36□□□□□ -0.11
RNF4-201ENST00000314289 V9GY48 417 aaPredicted RBP14.36□□□□□ -0.11
RNF4-201ENST00000314289 TSPY2A6NKD2 308 aa14.35□□□□□ -0.11
RNF4-201ENST00000314289 F8W031 263 aaPredicted RBP14.35□□□□□ -0.11
RNF4-201ENST00000314289 POLRMTO00411 1230 aaKnown RBP14.35□□□□□ -0.11
RNF4-201ENST00000314289 ADRA2BP18089 450 aa14.35□□□□□ -0.11
RNF4-201ENST00000314289 ZNF804AQ7Z570 1209 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms