RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TBC1D9Q6ZT07 1266 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 FASTKD5Q7L8L6 764 aaKnown RBP10.02□□□□□ -0.81
TPM3-203ENST00000312970 ZNF384Q8TF68 577 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 NSUN4Q96CB9 384 aaKnown RBP10.02□□□□□ -0.81
TPM3-203ENST00000312970 ZNF333Q96JL9 665 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 ARHGAP39Q9C0H5 1083 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 GPR108Q9NPR9 543 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 RAI14Q9P0K7 980 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 LRP2BPQ9P2M1 347 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 CPA4Q9UI42 421 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 PSMC4P43686 418 aa10.01□□□□□ -0.81
TPM3-203ENST00000312970 SLC4A8Q2Y0W8 1093 aa10.01□□□□□ -0.81
TPM3-203ENST00000312970 CCDC158Q5M9N0 1113 aa10.01□□□□□ -0.81
TPM3-203ENST00000312970 GPAT2Q6NUI2 795 aa10.01□□□□□ -0.81
TPM3-203ENST00000312970 PI16Q6UXB8 463 aa10.01□□□□□ -0.81
TPM3-203ENST00000312970 SSH3Q8TE77 659 aa10.01□□□□□ -0.81
TPM3-203ENST00000312970 AFG3L2Q9Y4W6 797 aa10.01□□□□□ -0.81
TPM3-203ENST00000312970 ATRNL1Q5VV63 1379 aa10.01□□□□□ -0.81
TPM3-203ENST00000312970 A0A0G2JLL6 359 aaPredicted RBP10□□□□□ -0.81
TPM3-203ENST00000312970 ZBTB7BO15156 539 aaPredicted RBP10□□□□□ -0.81
TPM3-203ENST00000312970 SURF6O75683 361 aaKnown RBP10□□□□□ -0.81
TPM3-203ENST00000312970 FMNL1O95466 1100 aaPredicted RBP10□□□□□ -0.81
TPM3-203ENST00000312970 MCAMP43121 646 aa10□□□□□ -0.81
TPM3-203ENST00000312970 OS9Q13438 667 aaPredicted RBP10□□□□□ -0.81
TPM3-203ENST00000312970 TNNI3KQ59H18 835 aa10□□□□□ -0.81
TPM3-203ENST00000312970 PRRT2Q7Z6L0 340 aaPredicted RBP10□□□□□ -0.81
TPM3-203ENST00000312970 FTSJ3Q8IY81 847 aaKnown RBP10□□□□□ -0.81
TPM3-203ENST00000312970 SLC17A8Q8NDX2 589 aa10□□□□□ -0.81
TPM3-203ENST00000312970 PARK7Q99497 189 aaKnown RBP10□□□□□ -0.81
TPM3-203ENST00000312970 NOL10Q9BSC4 688 aaKnown RBP10□□□□□ -0.81
TPM3-203ENST00000312970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10□□□□□ -0.81
TPM3-203ENST00000312970 FPGT-TNNI3KV9GXZ4 949 aa10□□□□□ -0.81
TPM3-203ENST00000312970 RFX7Q2KHR2 1363 aa10□□□□□ -0.81
TPM3-203ENST00000312970 BAG3O95817 575 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 SLURP2P0DP57 97 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 CYP2C8P10632 490 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 CTGFP29279 349 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 TTC39AQ5SRH9 613 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 DIEXFQ68CQ4 756 aaKnown RBP9.99□□□□□ -0.81
TPM3-203ENST00000312970 CHRDL2Q6WN34 429 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 GADL1Q6ZQY3 521 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 SH3TC2Q8TF17 1288 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 TRIM47Q96LD4 638 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 OSBPL5Q9H0X9 879 aaPredicted RBP9.99□□□□□ -0.81
TPM3-203ENST00000312970 SNRKQ9NRH2 765 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 RBM27Q9P2N5 1060 aaKnown RBP9.99□□□□□ -0.81
TPM3-203ENST00000312970 SRRDQ9UH36 339 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 SLC45A1Q9Y2W3 748 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 NOP58Q9Y2X3 529 aaKnown RBP9.99□□□□□ -0.81
TPM3-203ENST00000312970 STK24Q9Y6E0 443 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 ADGRA2Q96PE1 1338 aa9.99□□□□□ -0.81
TPM3-203ENST00000312970 VCANP13611 3396 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 DOCK2Q92608 1830 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 MGAMO43451 1857 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 TRIM75PA6NK02 468 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 IGSF3O75054 1194 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 MYCP01106 439 aaPredicted RBP9.98□□□□□ -0.81
TPM3-203ENST00000312970 BCRP11274 1271 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 PLCG2P16885 1265 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 OSBPP22059 807 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 FCGRTP55899 365 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 NAA16Q6N069 864 aaPredicted RBP9.98□□□□□ -0.81
TPM3-203ENST00000312970 ITPRIPQ8IWB1 547 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 TEX11Q8IYF3 940 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 RAET1EQ8TD07 263 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 ZNF512BQ96KM6 892 aaPredicted RBP9.98□□□□□ -0.81
TPM3-203ENST00000312970 DBNDD2Q9BQY9 259 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 PI4KBQ9UBF8 816 aa9.98□□□□□ -0.81
TPM3-203ENST00000312970 HERC5Q9UII4 1024 aaKnown RBP9.98□□□□□ -0.81
TPM3-203ENST00000312970 CYP2E1P05181 493 aaPredicted RBP9.97□□□□□ -0.81
TPM3-203ENST00000312970 RLBP1P12271 317 aa9.97□□□□□ -0.81
TPM3-203ENST00000312970 GRK4P32298 578 aa9.97□□□□□ -0.81
TPM3-203ENST00000312970 CAP2P40123 477 aa9.97□□□□□ -0.81
TPM3-203ENST00000312970 PPP4CP60510 307 aa9.97□□□□□ -0.81
TPM3-203ENST00000312970 SPP2Q13103 211 aa9.97□□□□□ -0.81
TPM3-203ENST00000312970 SH3RF3Q8TEJ3 882 aaPredicted RBP9.97□□□□□ -0.81
TPM3-203ENST00000312970 TBC1D2Q9BYX2 928 aa9.97□□□□□ -0.81
TPM3-203ENST00000312970 DHX36Q9H2U1 1008 aaKnown RBP9.97□□□□□ -0.81
TPM3-203ENST00000312970 C1orf115Q9H7X2 142 aa9.97□□□□□ -0.81
TPM3-203ENST00000312970 AATFQ9NY61 560 aaKnown RBP eCLIP9.97□□□□□ -0.81
TPM3-203ENST00000312970 MYPNQ86TC9 1320 aa9.97□□□□□ -0.81
TPM3-203ENST00000312970 FAM196BA6NMK8 535 aa9.96□□□□□ -0.82
TPM3-203ENST00000312970 USP17L5A8MUK1 530 aa9.96□□□□□ -0.82
TPM3-203ENST00000312970 ZAP70P43403 619 aa9.96□□□□□ -0.82
TPM3-203ENST00000312970 CCDC84Q86UT8 332 aaPredicted RBP9.96□□□□□ -0.82
TPM3-203ENST00000312970 FOXP4Q8IVH2 680 aaPredicted RBP9.96□□□□□ -0.82
TPM3-203ENST00000312970 PROCA1Q8NCQ7 364 aaPredicted RBP9.96□□□□□ -0.82
TPM3-203ENST00000312970 ZNF280CQ8ND82 737 aa9.96□□□□□ -0.82
TPM3-203ENST00000312970 SMCR8Q8TEV9 937 aaPredicted RBP9.96□□□□□ -0.82
TPM3-203ENST00000312970 TGFBRAP1Q8WUH2 860 aa9.96□□□□□ -0.82
TPM3-203ENST00000312970 CCDC8Q9H0W5 538 aaPredicted RBP9.96□□□□□ -0.82
TPM3-203ENST00000312970 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.96□□□□□ -0.82
TPM3-203ENST00000312970 BIN2Q9UBW5 565 aaPredicted RBP9.96□□□□□ -0.82
TPM3-203ENST00000312970 AGTPBP1Q9UPW5 1226 aa9.96□□□□□ -0.82
TPM3-203ENST00000312970 COL2A1P02458 1487 aaPredicted RBP9.96□□□□□ -0.82
TPM3-203ENST00000312970 LAMA2P24043 3122 aaKnown RBP9.95□□□□□ -0.82
TPM3-203ENST00000312970 MS4A1P11836 297 aa9.95□□□□□ -0.82
TPM3-203ENST00000312970 UBXN2AP68543 259 aa9.95□□□□□ -0.82
TPM3-203ENST00000312970 PRKCZQ05513 592 aa9.95□□□□□ -0.82
TPM3-203ENST00000312970 PABPC4Q13310 644 aaKnown RBP eCLIP9.95□□□□□ -0.822e-26■■■□□ 17.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms