RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 IFIT5Q13325 482 aaKnown RBP12.69□□□□□ -0.38
PTPN7-201ENST00000309017 KRT28Q7Z3Y7 464 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 TBC1D10CQ8IV04 446 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 CMTR1Q8N1G2 835 aaKnown RBP12.69□□□□□ -0.38
PTPN7-201ENST00000309017 ENOX1Q8TC92 643 aaKnown RBP12.69□□□□□ -0.38
PTPN7-201ENST00000309017 ZKSCAN3Q9BRR0 538 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 GBP3Q9H0R5 595 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 ABCB6Q9NP58 842 aa12.69□□□□□ -0.38
PTPN7-201ENST00000309017 LTN1O94822 1766 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 ERICH2A1L162 156 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 IVLP07476 585 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 GRIN1Q05586 938 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 SLC35F6Q8N357 371 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 DCAF5Q96JK2 942 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 NUP88Q99567 741 aaPredicted RBP12.68□□□□□ -0.38
PTPN7-201ENST00000309017 NAPBQ9H115 298 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 INCENPQ9NQS7 918 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 SH2B2O14492 632 aaPredicted RBP12.68□□□□□ -0.38
PTPN7-201ENST00000309017 COBLO75128 1261 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 CASP7P55210 303 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 CHRNA2Q15822 529 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 CDC5LQ99459 802 aaKnown RBP12.68□□□□□ -0.38
PTPN7-201ENST00000309017 LCMT1Q9UIC8 334 aa12.68□□□□□ -0.38
PTPN7-201ENST00000309017 N4BP3O15049 544 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 KANK3Q6NY19 840 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 ACRBPQ8NEB7 543 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 ANKRD20A12PQ8NF67 263 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 MAP3K14Q99558 947 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 ADGRG1Q9Y653 693 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 SYNRGQ9UMZ2 1314 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 A0A0U1RQJ8 604 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 N4BP1O75113 896 aaKnown RBP12.67□□□□□ -0.38
PTPN7-201ENST00000309017 TFRCP02786 760 aaKnown RBP12.67□□□□□ -0.38
PTPN7-201ENST00000309017 CASP14P31944 242 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 TBX2Q13207 712 aaPredicted RBP12.67□□□□□ -0.38
PTPN7-201ENST00000309017 SART3Q15020 963 aaKnown RBP12.67□□□□□ -0.38
PTPN7-201ENST00000309017 RAD9BQ6WBX8 426 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 LDHAL6AQ6ZMR3 332 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 SMYD4Q8IYR2 804 aaPredicted RBP12.67□□□□□ -0.38
PTPN7-201ENST00000309017 ATRIPQ8WXE1 791 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 STAMQ92783 540 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 FAM89AQ96GI7 184 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 CABP5Q9NP86 173 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 CEP131Q9UPN4 1083 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 CASP1P29466 404 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 NR5A1Q13285 461 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 FBXL16Q8N461 479 aa12.67□□□□□ -0.38
PTPN7-201ENST00000309017 NAPGQ99747 312 aaPredicted RBP12.67□□□□□ -0.38
PTPN7-201ENST00000309017 ABCC6O95255 1503 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 ANKRD65E5RJM6 399 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 PLCD1P51178 756 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 CTDSPL2Q05D32 466 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 RTN1Q16799 776 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 RILPL1Q5EBL4 403 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 RGS22Q8NE09 1264 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 IPO4Q8TEX9 1081 aaKnown RBP12.66□□□□□ -0.38
PTPN7-201ENST00000309017 TMEM87BQ96K49 555 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 PNKPQ96T60 521 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 UBN2Q6ZU65 1347 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 MRC1P22897 1456 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 TSR1Q2NL82 804 aaKnown RBP12.66□□□□□ -0.38
PTPN7-201ENST00000309017 CERS3Q8IU89 383 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.66□□□□□ -0.38
PTPN7-201ENST00000309017 PCDHB6Q9Y5E3 794 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 OVOS2A0A0G2JMS6 1433 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 CPDO75976 1380 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 FOXP2O15409 715 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 RANBP6O60518 1105 aaKnown RBP12.66□□□□□ -0.38
PTPN7-201ENST00000309017 CNGA4Q8IV77 575 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 GUCA1BQ9UMX6 200 aa12.66□□□□□ -0.38
PTPN7-201ENST00000309017 RGPD2P0DJD1 1756 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 NBPF26B4DH59 902 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 TDO2P48775 406 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 PIP4K2BP78356 416 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 SLC20A2Q08357 652 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 NBPF14Q5TI25 921 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 NBPF10Q6P3W6 841 aaKnown RBP12.65□□□□□ -0.38
PTPN7-201ENST00000309017 USP49Q70CQ1 688 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 SRLQ86TD4 932 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 NBPF15Q8N660 670 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 CAGE1Q8TC20 777 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 PANX2Q96RD6 677 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 SLF1Q9BQI6 1058 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 CSRNP2Q9H175 543 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 VPS16Q9H269 839 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 PLEKHA4Q9H4M7 779 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 ZNF532Q9HCE3 1301 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 CIAO1O76071 339 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 GUCY1A2P33402 732 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 CASP8Q14790 479 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 CCDC148Q8NFR7 591 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 GDAP1L1Q96MZ0 367 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 CTAGE1Q96RT6 745 aa12.65□□□□□ -0.38
PTPN7-201ENST00000309017 NAA15Q9BXJ9 866 aaKnown RBP12.65□□□□□ -0.38
PTPN7-201ENST00000309017 TEX13AQ9BXU3 409 aaPredicted RBP12.65□□□□□ -0.38
PTPN7-201ENST00000309017 VSNL1P62760 191 aa12.65□□□□□ -0.39
PTPN7-201ENST00000309017 NR1I3Q14994 352 aa12.65□□□□□ -0.39
PTPN7-201ENST00000309017 BEND6Q5SZJ8 279 aaPredicted RBP12.65□□□□□ -0.39
PTPN7-201ENST00000309017 ANKLE2Q86XL3 938 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms