RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 PDE3AQ14432 1141 aa12.57□□□□□ -0.4
COL4A3-201ENST00000304990 FAM109BQ6ICB4 259 aaPredicted RBP12.57□□□□□ -0.4
COL4A3-201ENST00000304990 ANKRD44Q8N8A2 993 aa12.57□□□□□ -0.4
COL4A3-201ENST00000304990 GUCD1Q96NT3 240 aa12.57□□□□□ -0.4
COL4A3-201ENST00000304990 NUDT12Q9BQG2 462 aa12.57□□□□□ -0.4
COL4A3-201ENST00000304990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL4A3-201ENST00000304990 PRKAG2Q9UGJ0 569 aa12.57□□□□□ -0.4
COL4A3-201ENST00000304990 DENND2AQ9ULE3 1009 aa12.57□□□□□ -0.4
COL4A3-201ENST00000304990 PFASO15067 1338 aa12.57□□□□□ -0.4
COL4A3-201ENST00000304990 EYA2O00167 538 aa12.56□□□□□ -0.4
COL4A3-201ENST00000304990 SLURP2P0DP57 97 aa12.56□□□□□ -0.4
COL4A3-201ENST00000304990 ZKSCAN1P17029 563 aaPredicted RBP12.56□□□□□ -0.4
COL4A3-201ENST00000304990 IRX3P78415 501 aaPredicted RBP12.56□□□□□ -0.4
COL4A3-201ENST00000304990 ATP2B3Q16720 1220 aa12.56□□□□□ -0.4
COL4A3-201ENST00000304990 SH3BP5LQ7L8J4 393 aa12.56□□□□□ -0.4
COL4A3-201ENST00000304990 WDR63Q8IWG1 891 aa12.56□□□□□ -0.4
COL4A3-201ENST00000304990 TRMT44Q8IYL2 757 aaKnown RBP12.56□□□□□ -0.4
COL4A3-201ENST00000304990 ZNF280CQ8ND82 737 aa12.56□□□□□ -0.4
COL4A3-201ENST00000304990 ASCC2Q9H1I8 757 aaPredicted RBP12.56□□□□□ -0.4
COL4A3-201ENST00000304990 ABCF2Q9UG63 623 aa12.56□□□□□ -0.4
COL4A3-201ENST00000304990 GJD2Q9UKL4 321 aa12.56□□□□□ -0.4
COL4A3-201ENST00000304990 UTYO14607 1347 aa12.56□□□□□ -0.4
COL4A3-201ENST00000304990 BTDP43251 543 aa12.55□□□□□ -0.4
COL4A3-201ENST00000304990 LRRC26Q2I0M4 334 aa12.55□□□□□ -0.4
COL4A3-201ENST00000304990 SOCS4Q8WXH5 440 aa12.55□□□□□ -0.4
COL4A3-201ENST00000304990 TBC1D2Q9BYX2 928 aa12.55□□□□□ -0.4
COL4A3-201ENST00000304990 OSBPL5Q9H0X9 879 aaPredicted RBP12.55□□□□□ -0.4
COL4A3-201ENST00000304990 AS3MTQ9HBK9 375 aa12.55□□□□□ -0.4
COL4A3-201ENST00000304990 PRDM6Q9NQX0 595 aa12.55□□□□□ -0.4
COL4A3-201ENST00000304990 TMOD4Q9NZQ9 345 aa12.55□□□□□ -0.4
COL4A3-201ENST00000304990 CUL9Q8IWT3 2517 aa12.55□□□□□ -0.4
COL4A3-201ENST00000304990 SALL1Q9NSC2 1324 aa12.55□□□□□ -0.4
COL4A3-201ENST00000304990 FRMPD3Q5JV73 1810 aa12.55□□□□□ -0.4
COL4A3-201ENST00000304990 FAM196BA6NMK8 535 aa12.54□□□□□ -0.4
COL4A3-201ENST00000304990 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
COL4A3-201ENST00000304990 SEMA3EO15041 775 aa12.54□□□□□ -0.4
COL4A3-201ENST00000304990 MAP3K10Q02779 954 aa12.54□□□□□ -0.4
COL4A3-201ENST00000304990 MAFAQ8NHW3 353 aaPredicted RBP12.54□□□□□ -0.4
COL4A3-201ENST00000304990 SENP6Q9GZR1 1112 aaPredicted RBP12.54□□□□□ -0.4
COL4A3-201ENST00000304990 SIL1Q9H173 461 aa12.54□□□□□ -0.4
COL4A3-201ENST00000304990 CEP126Q9P2H0 1117 aa12.54□□□□□ -0.4
COL4A3-201ENST00000304990 LAMA3Q16787 3333 aa12.53□□□□□ -0.4
COL4A3-201ENST00000304990 USP17L5A8MUK1 530 aa12.53□□□□□ -0.4
COL4A3-201ENST00000304990 COL6A1P12109 1028 aa12.53□□□□□ -0.4
COL4A3-201ENST00000304990 CCND3P30281 292 aaPredicted RBP12.53□□□□□ -0.4
COL4A3-201ENST00000304990 RGS2P41220 211 aa12.53□□□□□ -0.4
COL4A3-201ENST00000304990 CACNB2Q08289 660 aaPredicted RBP12.53□□□□□ -0.4
COL4A3-201ENST00000304990 MAP3K21Q5TCX8 1036 aa12.53□□□□□ -0.4
COL4A3-201ENST00000304990 SPTY2D1Q68D10 685 aaPredicted RBP12.53□□□□□ -0.4
COL4A3-201ENST00000304990 GPRC5AQ8NFJ5 357 aa12.53□□□□□ -0.4
COL4A3-201ENST00000304990 SYMPKQ92797 1274 aaKnown RBP12.53□□□□□ -0.4
COL4A3-201ENST00000304990 DDX4Q9NQI0 724 aaKnown RBP12.53□□□□□ -0.4
COL4A3-201ENST00000304990 MORF4L1Q9UBU8 362 aa12.53□□□□□ -0.4
COL4A3-201ENST00000304990 GAKO14976 1311 aa12.53□□□□□ -0.4
COL4A3-201ENST00000304990 MAST2Q6P0Q8 1798 aa12.53□□□□□ -0.4
COL4A3-201ENST00000304990 TBC1D12O60347 775 aa12.52□□□□□ -0.41
COL4A3-201ENST00000304990 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
COL4A3-201ENST00000304990 PHKA1P46020 1223 aa12.52□□□□□ -0.41
COL4A3-201ENST00000304990 CDX2Q99626 313 aaPredicted RBP12.52□□□□□ -0.41
COL4A3-201ENST00000304990 CNGA1P29973 690 aa12.51□□□□□ -0.41
COL4A3-201ENST00000304990 MAPK4P31152 587 aa12.51□□□□□ -0.41
COL4A3-201ENST00000304990 CAP2P40123 477 aa12.51□□□□□ -0.41
COL4A3-201ENST00000304990 ATN1P54259 1190 aaPredicted RBP12.51□□□□□ -0.41
COL4A3-201ENST00000304990 MTMR2Q13614 643 aa12.51□□□□□ -0.41
COL4A3-201ENST00000304990 CCDC184Q52MB2 194 aa12.51□□□□□ -0.41
COL4A3-201ENST00000304990 ERICH6Q7L0X2 663 aa12.51□□□□□ -0.41
COL4A3-201ENST00000304990 PAGR1Q9BTK6 254 aa12.51□□□□□ -0.41
COL4A3-201ENST00000304990 MROH7-TTC4A0A0A0MT08 1334 aa12.51□□□□□ -0.41
COL4A3-201ENST00000304990 RFX7Q2KHR2 1363 aa12.51□□□□□ -0.41
COL4A3-201ENST00000304990 FOSL2P15408 326 aa12.5□□□□□ -0.41
COL4A3-201ENST00000304990 HERVK_113P62684 666 aa12.5□□□□□ -0.41
COL4A3-201ENST00000304990 CCL14Q16627 93 aa12.5□□□□□ -0.41
COL4A3-201ENST00000304990 WDR78Q5VTH9 848 aa12.5□□□□□ -0.41
COL4A3-201ENST00000304990 MFSD14CQ5VZR4 134 aa12.5□□□□□ -0.41
COL4A3-201ENST00000304990 PLEKHH3Q7Z736 793 aa12.5□□□□□ -0.41
COL4A3-201ENST00000304990 MYLIPQ8WY64 445 aa12.5□□□□□ -0.41
COL4A3-201ENST00000304990 P2RX7Q99572 595 aaKnown RBP12.5□□□□□ -0.41
COL4A3-201ENST00000304990 APBA2Q99767 749 aa12.5□□□□□ -0.41
COL4A3-201ENST00000304990 TRIM34Q9BYJ4 488 aa12.5□□□□□ -0.41
COL4A3-201ENST00000304990 PRDM5Q9NQX1 630 aaPredicted RBP12.5□□□□□ -0.41
COL4A3-201ENST00000304990 COL2A1P02458 1487 aaPredicted RBP12.5□□□□□ -0.41
COL4A3-201ENST00000304990 LTBP2Q14767 1821 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 PEX10O60683 326 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 GLRX3O76003 335 aaKnown RBP12.49□□□□□ -0.41
COL4A3-201ENST00000304990 CIAO1O76071 339 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 LDHCP07864 332 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 RFX5P48382 616 aaPredicted RBP12.49□□□□□ -0.41
COL4A3-201ENST00000304990 GSTO1P78417 241 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 POLA2Q14181 598 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 CCDC102BQ68D86 513 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 LHX8Q68G74 356 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 ATG9AQ7Z3C6 839 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 GPR142Q7Z601 462 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 NOL10Q9BSC4 688 aaKnown RBP12.49□□□□□ -0.41
COL4A3-201ENST00000304990 USP44Q9H0E7 712 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 ATP11BQ9Y2G3 1177 aa12.49□□□□□ -0.41
COL4A3-201ENST00000304990 PTPRCP08575 1304 aa12.48□□□□□ -0.41
COL4A3-201ENST00000304990 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms