RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 MINDY4BA8MYZ0 360 aa29.21■■■□□ 2.27
HOXC9-201ENST00000303450 TBC1D12O60347 775 aa29.21■■■□□ 2.27
HOXC9-201ENST00000303450 USP2O75604 605 aaPredicted RBP29.21■■■□□ 2.27
HOXC9-201ENST00000303450 IREB2P48200 963 aaKnown RBP29.21■■■□□ 2.27
HOXC9-201ENST00000303450 ALX1Q15699 326 aa29.21■■■□□ 2.27
HOXC9-201ENST00000303450 SBK1Q52WX2 424 aa29.21■■■□□ 2.27
HOXC9-201ENST00000303450 C12orf60Q5U649 245 aa29.21■■■□□ 2.27
HOXC9-201ENST00000303450 KIAA1211Q6ZU35 1233 aa29.21■■■□□ 2.27
HOXC9-201ENST00000303450 MOB2Q70IA6 237 aa29.21■■■□□ 2.27
HOXC9-201ENST00000303450 DSCC1Q9BVC3 393 aa29.21■■■□□ 2.27
HOXC9-201ENST00000303450 EHD4Q9H223 541 aa29.21■■■□□ 2.27
HOXC9-201ENST00000303450 PAPPA2Q9BXP8 1791 aa29.21■■■□□ 2.27
HOXC9-201ENST00000303450 FGAP02671 866 aa29.2■■■□□ 2.27
HOXC9-201ENST00000303450 FAM196BA6NMK8 535 aa29.2■■■□□ 2.26
HOXC9-201ENST00000303450 SLURP2P0DP57 97 aa29.2■■■□□ 2.26
HOXC9-201ENST00000303450 MAP3K10Q02779 954 aa29.2■■■□□ 2.26
HOXC9-201ENST00000303450 ABT1Q9ULW3 272 aaKnown RBP29.2■■■□□ 2.26
HOXC9-201ENST00000303450 SIPA1L1O43166 1804 aa29.19■■■□□ 2.26
HOXC9-201ENST00000303450 UBE2Q2LH0YL09 131 aa29.19■■■□□ 2.26
HOXC9-201ENST00000303450 EVX2Q03828 476 aa29.19■■■□□ 2.26
HOXC9-201ENST00000303450 MAP3K11Q16584 847 aa29.19■■■□□ 2.26
HOXC9-201ENST00000303450 METTL16Q86W50 562 aaKnown RBP29.19■■■□□ 2.26
HOXC9-201ENST00000303450 CREBZFQ9NS37 354 aa29.19■■■□□ 2.26
HOXC9-201ENST00000303450 ZMYM6O95789 1325 aa29.18■■■□□ 2.26
HOXC9-201ENST00000303450 KLRG1Q96E93 195 aa29.18■■■□□ 2.26
HOXC9-201ENST00000303450 WRNIP1Q96S55 665 aa29.18■■■□□ 2.26
HOXC9-201ENST00000303450 HUNKP57058 714 aa29.17■■■□□ 2.26
HOXC9-201ENST00000303450 SAPCD2Q86UD0 394 aa29.16■■■□□ 2.26
HOXC9-201ENST00000303450 DNAJC18Q9H819 358 aa29.16■■■□□ 2.26
HOXC9-201ENST00000303450 ANO2Q9NQ90 1003 aa29.16■■■□□ 2.26
HOXC9-201ENST00000303450 TLL2Q9Y6L7 1015 aa29.16■■■□□ 2.26
HOXC9-201ENST00000303450 HSPA6P17066 643 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 MAP3K9P80192 1104 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 PTH1RQ03431 593 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 PPARAQ07869 468 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 DYNLL2Q96FJ2 89 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 CTNNA3Q9UI47 895 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 ZNF112Q9UJU3 913 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 LAMB1P07942 1786 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 SMIM22K7EJ46 135 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 GABPAQ06546 454 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 ANKRD13AQ8IZ07 590 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.15■■■□□ 2.26
HOXC9-201ENST00000303450 SWAP70Q9UH65 585 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 TAOK2Q9UL54 1235 aa29.15■■■□□ 2.26
HOXC9-201ENST00000303450 PHF20L1A8MW92 1017 aa29.14■■■□□ 2.25
HOXC9-201ENST00000303450 SLC3A2P08195 630 aaKnown RBP29.14■■■□□ 2.25
HOXC9-201ENST00000303450 LDLRAD1Q5T700 205 aa29.14■■■□□ 2.25
HOXC9-201ENST00000303450 STK11IPQ8N1F8 1099 aa29.14■■■□□ 2.25
HOXC9-201ENST00000303450 CSADQ9Y600 493 aa29.14■■■□□ 2.25
HOXC9-201ENST00000303450 C16orf86Q6ZW13 317 aa29.13■■■□□ 2.25
HOXC9-201ENST00000303450 LSG1Q9H089 658 aaKnown RBP29.13■■■□□ 2.25
HOXC9-201ENST00000303450 UNCXA6NJT0 531 aa29.12■■■□□ 2.25
HOXC9-201ENST00000303450 INPP5BP32019 993 aa29.12■■■□□ 2.25
HOXC9-201ENST00000303450 SLC44A5Q8NCS7 719 aa29.12■■■□□ 2.25
HOXC9-201ENST00000303450 MAP4K1Q92918 833 aa29.12■■■□□ 2.25
HOXC9-201ENST00000303450 ZKSCAN4Q969J2 545 aaPredicted RBP29.12■■■□□ 2.25
HOXC9-201ENST00000303450 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.12■■■□□ 2.25
HOXC9-201ENST00000303450 U3KPZ7 1027 aaPredicted RBP29.12■■■□□ 2.25
HOXC9-201ENST00000303450 ROBO3Q96MS0 1386 aa29.12■■■□□ 2.25
HOXC9-201ENST00000303450 ZNF213O14771 459 aa29.11■■■□□ 2.25
HOXC9-201ENST00000303450 CDK8P49336 464 aa29.11■■■□□ 2.25
HOXC9-201ENST00000303450 TATDN1Q6P1N9 297 aa29.11■■■□□ 2.25
HOXC9-201ENST00000303450 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.11■■■□□ 2.25
HOXC9-201ENST00000303450 CTNND1O60716 968 aaKnown RBP29.1■■■□□ 2.25
HOXC9-201ENST00000303450 SHMT1P34896 483 aa29.1■■■□□ 2.25
HOXC9-201ENST00000303450 HAND2P61296 217 aa29.1■■■□□ 2.25
HOXC9-201ENST00000303450 CTDSPL2Q05D32 466 aa29.1■■■□□ 2.25
HOXC9-201ENST00000303450 VGLL4Q14135 290 aa29.1■■■□□ 2.25
HOXC9-201ENST00000303450 IMMTQ16891 758 aaKnown RBP29.1■■■□□ 2.25
HOXC9-201ENST00000303450 ZNF287Q9HBT7 754 aa29.1■■■□□ 2.25
HOXC9-201ENST00000303450 ANAPC4Q9UJX5 808 aa29.1■■■□□ 2.25
HOXC9-201ENST00000303450 OTOFQ9HC10 1997 aa29.1■■■□□ 2.25
HOXC9-201ENST00000303450 REC8O95072 547 aa29.1■■■□□ 2.25
HOXC9-201ENST00000303450 PDE4BQ07343 736 aa29.1■■■□□ 2.25
HOXC9-201ENST00000303450 CERKLQ49MI3 558 aaPredicted RBP29.1■■■□□ 2.25
HOXC9-201ENST00000303450 CLMNQ96JQ2 1002 aa29.1■■■□□ 2.25
HOXC9-201ENST00000303450 MKNK2Q9HBH9 465 aa29.1■■■□□ 2.25
HOXC9-201ENST00000303450 HTRA3P83110 453 aa29.09■■■□□ 2.25
HOXC9-201ENST00000303450 SLC10A4Q96EP9 437 aa29.09■■■□□ 2.25
HOXC9-201ENST00000303450 RBM8AQ9Y5S9 174 aaKnown RBP29.09■■■□□ 2.25
HOXC9-201ENST00000303450 MYH8P13535 1937 aa29.08■■■□□ 2.25
HOXC9-201ENST00000303450 CAP2P40123 477 aa29.08■■■□□ 2.25
HOXC9-201ENST00000303450 RRP1BQ14684 758 aaKnown RBP29.08■■■□□ 2.25
HOXC9-201ENST00000303450 RGMBQ6NW40 437 aa29.08■■■□□ 2.25
HOXC9-201ENST00000303450 HHIPL1Q96JK4 782 aa29.08■■■□□ 2.25
HOXC9-201ENST00000303450 GDF11O95390 407 aa29.07■■■□□ 2.24
HOXC9-201ENST00000303450 ZNF157P51786 506 aaPredicted RBP29.07■■■□□ 2.24
HOXC9-201ENST00000303450 DEFB115Q30KQ5 88 aa29.07■■■□□ 2.24
HOXC9-201ENST00000303450 NOL9Q5SY16 702 aaKnown RBP29.07■■■□□ 2.24
HOXC9-201ENST00000303450 PAXIP1Q6ZW49 1069 aaPredicted RBP29.07■■■□□ 2.24
HOXC9-201ENST00000303450 SCYL3Q8IZE3 742 aa29.07■■■□□ 2.24
HOXC9-201ENST00000303450 ELP3Q9H9T3 547 aa29.07■■■□□ 2.24
HOXC9-201ENST00000303450 PICK1Q9NRD5 415 aa29.07■■■□□ 2.24
HOXC9-201ENST00000303450 SNCAIPQ9Y6H5 919 aa29.06■■■□□ 2.24
HOXC9-201ENST00000303450 RASSF10A6NK89 507 aa29.05■■■□□ 2.24
HOXC9-201ENST00000303450 PRDM1O75626 825 aa29.05■■■□□ 2.24
HOXC9-201ENST00000303450 LAMA4Q16363 1823 aa29.05■■■□□ 2.24
HOXC9-201ENST00000303450 ABCB5Q2M3G0 1257 aa29.04■■■□□ 2.24
HOXC9-201ENST00000303450 CCDC17Q96LX7 622 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms