RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CNNM3Q8NE01 707 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 OXER1Q8TDS5 423 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 STAG1Q8WVM7 1258 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 FEZ1Q99689 392 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 OSBPL5Q9H0X9 879 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-204ENST00000300862 PCDHA5Q9Y5H7 936 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 NYAP1Q6ZVC0 841 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 RAI14Q9P0K7 980 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.85□□□□□ -0.03
HIF3A-204ENST00000300862 TUBE1Q9UJT0 475 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 PAXBP1Q9Y5B6 917 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 V9GYY5 206 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-204ENST00000300862 KDM4FA0A1W2PPD8 638 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 MMP1P03956 469 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 GSDMDP57764 484 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 TPM4P67936 248 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 PPARAQ07869 468 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 GOLGA8FQ08AF8 430 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 GOLGA8DPQ0D2H9 430 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 TRIM22Q8IYM9 498 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 AK7Q96M32 723 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 TIGD1Q96MW7 591 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 PCDHB6Q9Y5E3 794 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 COL4A1P02462 1669 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 NHSL1Q5SYE7 1610 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 ERICH2A1L162 156 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 CUTAO60888 179 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 PRDM1O75626 825 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 BMP6P22004 513 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 PDE4BQ07343 736 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 SART3Q15020 963 aaKnown RBP14.84□□□□□ -0.03
HIF3A-204ENST00000300862 SYCP1Q15431 976 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 E4F1Q66K89 784 aaPredicted RBP14.84□□□□□ -0.03
HIF3A-204ENST00000300862 KRBA2Q6ZNG9 492 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 GRAMD1CQ8IYS0 662 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 PDILTQ8N807 584 aa14.84□□□□□ -0.03
HIF3A-204ENST00000300862 KRI1Q8N9T8 703 aaKnown RBP14.84□□□□□ -0.03
HIF3A-204ENST00000300862 MARCH10Q8NA82 808 aaPredicted RBP14.84□□□□□ -0.03
HIF3A-204ENST00000300862 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.84□□□□□ -0.03
HIF3A-204ENST00000300862 KCNQ2O43526 872 aa14.83□□□□□ -0.03
HIF3A-204ENST00000300862 SFPQP23246 707 aaKnown RBP eCLIP14.83□□□□□ -0.03
HIF3A-204ENST00000300862 SAFBQ15424 915 aaKnown RBP eCLIP14.83□□□□□ -0.03
HIF3A-204ENST00000300862 BICDL1Q6ZP65 573 aa14.83□□□□□ -0.03
HIF3A-204ENST00000300862 ZNF654Q8IZM8 581 aa14.83□□□□□ -0.03
HIF3A-204ENST00000300862 CRACR2BQ8N4Y2 399 aaPredicted RBP14.83□□□□□ -0.03
HIF3A-204ENST00000300862 UBAC1Q9BSL1 405 aa14.83□□□□□ -0.03
HIF3A-204ENST00000300862 FAM205CA6NFA0 338 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 SERPINC1P01008 464 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 GNAT2P19087 354 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 DYNLL1P63167 89 aaKnown RBP14.83□□□□□ -0.04
HIF3A-204ENST00000300862 ZNF827Q17R98 1081 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 USP49Q70CQ1 688 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 FANCBQ8NB91 859 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 FANCLQ9NW38 375 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 OGFRQ9NZT2 677 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 IMPACTQ9P2X3 320 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 LRP5O75197 1615 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 PNPLA7Q6ZV29 1317 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 STK36Q9NRP7 1315 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 ECM29Q5VYK3 1845 aa14.83□□□□□ -0.04
HIF3A-204ENST00000300862 POLR2DO15514 142 aaKnown RBP14.82□□□□□ -0.04
HIF3A-204ENST00000300862 UBASH3AP57075 661 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 EVX2Q03828 476 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 PARP10Q53GL7 1025 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 TMEM232C9JQI7 657 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 PRR29P0C7W0 189 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 MYL5Q02045 173 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 CFAP100Q494V2 611 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 ERFEQ4G0M1 354 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 WASF1Q92558 559 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 SHISA4Q96DD7 197 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 CABP5Q9NP86 173 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 TNKSO95271 1327 aa14.82□□□□□ -0.04
HIF3A-204ENST00000300862 MAGEB6P1A0A0J9YX57 407 aa14.81□□□□□ -0.04
HIF3A-204ENST00000300862 IKBKBO14920 756 aa14.81□□□□□ -0.04
HIF3A-204ENST00000300862 DOT1LQ8TEK3 1739 aa14.81□□□□□ -0.04
HIF3A-204ENST00000300862 VPS54Q9P1Q0 977 aa14.81□□□□□ -0.04
HIF3A-204ENST00000300862 FBXO2Q9UK22 296 aaPredicted RBP14.81□□□□□ -0.04
HIF3A-204ENST00000300862 ZNF215Q9UL58 517 aaPredicted RBP14.81□□□□□ -0.04
HIF3A-204ENST00000300862 MYH14Q7Z406 1995 aaKnown RBP14.81□□□□□ -0.04
HIF3A-204ENST00000300862 FAM237AA0A1B0GTK4 181 aa14.81□□□□□ -0.04
HIF3A-204ENST00000300862 BRD2P25440 801 aaKnown RBP14.81□□□□□ -0.04
HIF3A-204ENST00000300862 SERTAD1Q9UHV2 236 aa14.81□□□□□ -0.04
HIF3A-204ENST00000300862 CHD4Q14839 1912 aa14.81□□□□□ -0.04
HIF3A-204ENST00000300862 DEXIO95424 95 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 OLFM4Q6UX06 510 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 CCDC150Q8NCX0 1101 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 PPP1R13BQ96KQ4 1090 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 DDX41Q9UJV9 622 aaKnown RBP14.8□□□□□ -0.04
HIF3A-204ENST00000300862 BAZ2BQ9UIF8 2168 aaKnown RBP14.8□□□□□ -0.04
HIF3A-204ENST00000300862 NUTM2BA6NNL0 878 aaPredicted RBP14.8□□□□□ -0.04
HIF3A-204ENST00000300862 NUTM2EB1AL46 878 aaPredicted RBP14.8□□□□□ -0.04
HIF3A-204ENST00000300862 KLRK1P26718 216 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 MDM2Q00987 491 aaPredicted RBP14.8□□□□□ -0.04
HIF3A-204ENST00000300862 EARS2Q5JPH6 523 aaKnown RBP14.8□□□□□ -0.04
HIF3A-204ENST00000300862 NUTM2AQ8IVF1 878 aaPredicted RBP14.8□□□□□ -0.04
HIF3A-204ENST00000300862 TRMT44Q8IYL2 757 aaKnown RBP14.8□□□□□ -0.04
HIF3A-204ENST00000300862 CCDC24Q8N4L8 307 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 RGS22Q8NE09 1264 aa14.8□□□□□ -0.04
HIF3A-204ENST00000300862 RNF41Q9H4P4 317 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms