RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 ZNF654Q8IZM8 581 aa9.49□□□□□ -0.89
SNRPD1-201ENST00000300413 USP17L8P0C7I0 530 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 KLHL40Q2TBA0 621 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 KRT79Q5XKE5 535 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 EDC3Q96F86 508 aaKnown RBP9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 SERPINB13Q9UIV8 391 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 GRIN3BO60391 1043 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 ASPRV1Q53RT3 343 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 KANSL2Q9H9L4 492 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 DBNDD1Q9H9R9 158 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 SPTLC2O15270 562 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 C21orf2O43822 256 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 MTFR1LQ9H019 292 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 SLC5A4Q9NY91 659 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 WWC3Q9ULE0 1092 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 ZMYM6O95789 1325 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 PFKFB2O60825 505 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 RCAN1P53805 252 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 TCP10Q12799 353 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 ABCB5Q2M3G0 1257 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 SYNE4Q8N205 404 aa9.48□□□□□ -0.89
SNRPD1-201ENST00000300413 TBCAO75347 108 aaKnown RBP9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 MCAMP43121 646 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 SYKP43405 635 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 SCNN1DP51172 638 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 ADCY7P51828 1080 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 TGFB2P61812 414 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 MECOMQ03112 1051 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 ICA1Q05084 483 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 STX1AQ16623 288 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 CHST3Q7LGC8 479 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 RAB11FIP4Q86YS3 637 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 GTF3C6Q969F1 213 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 TTC14Q96N46 770 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 LARP6Q9BRS8 491 aaKnown RBP9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 NDUFB9Q9Y6M9 179 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 USP37Q86T82 979 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 AHDC1Q5TGY3 1603 aaPredicted RBP9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 ECE2O60344 883 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 APOBEC3FQ8IUX4 373 aaKnown RBP9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 ZKSCAN3Q9BRR0 538 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 TANGO6Q9C0B7 1094 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 VPS33BQ9H267 617 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 IVNS1ABPQ9Y6Y0 642 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 TNKSO95271 1327 aa9.47□□□□□ -0.89
SNRPD1-201ENST00000300413 PRDM1O75626 825 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 ZBTB7AO95365 584 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 IRX3P78415 501 aaPredicted RBP9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 STRIP1Q5VSL9 837 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 DTHD1Q6ZMT9 781 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 ATG9AQ7Z3C6 839 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 ARMC9Q7Z3E5 817 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 USP25Q9UHP3 1055 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 PNPLA7Q6ZV29 1317 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 GYS1P13807 737 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 PTH1RQ03431 593 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 CETN1Q12798 172 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 NONOQ15233 471 aaKnown RBP eCLIP9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 BRDTQ58F21 947 aaPredicted RBP9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 OTUD7BQ6GQQ9 843 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 MCF2L2Q86YR7 1114 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 PNMA1Q8ND90 353 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 NAP1L5Q96NT1 182 aaPredicted RBP9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 GPCPD1Q9NPB8 672 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 CLIP2Q9UDT6 1046 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 PARP4Q9UKK3 1724 aaKnown RBP9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 MRPL11Q9Y3B7 192 aaKnown RBP9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 MROH7-TTC4A0A0A0MT08 1334 aa9.46□□□□□ -0.89
SNRPD1-201ENST00000300413 PLCD1P51178 756 aa9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 GPSM2P81274 684 aa9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 FKBP15Q5T1M5 1219 aa9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 SDR42E1Q8WUS8 393 aa9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 CSRNP1Q96S65 589 aa9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 PIH1D3Q9NQM4 214 aaKnown RBP9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 SAMM50Q9Y512 469 aa9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 TTLL1O95922 423 aa9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 SYT1P21579 422 aa9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 LIFRP42702 1097 aa9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 HAUS3Q68CZ6 603 aa9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 STRBPQ96SI9 672 aaKnown RBP9.46□□□□□ -0.9
SNRPD1-201ENST00000300413 ROBO1Q9Y6N7 1651 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 IQCA1LA6NCM1 817 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 RPS12P25398 132 aaKnown RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 STAT6P42226 847 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 PLS1Q14651 629 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 KRI1Q8N9T8 703 aaKnown RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 FANCBQ8NB91 859 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 TBC1D16Q8TBP0 767 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 TFIP11Q9UBB9 837 aaKnown RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 KCNG1Q9UIX4 513 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 ZNRF3Q9ULT6 936 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 V9GY48 417 aaPredicted RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 TCP10L2B9ZVM9 353 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 SEC24BO95487 1268 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 FOSP01100 380 aaPredicted RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 SPAG1Q07617 926 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 ARHGEF6Q15052 776 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 EZH2Q15910 746 aaKnown RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 CT47A1Q5JQC4 288 aaPredicted RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 ZNF397Q8NF99 534 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms