RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 SENP2Q9HC62 589 aa14.8□□□□□ -0.04
TVP23A-201ENST00000299866 SLIT1O75093 1534 aa14.8□□□□□ -0.04
TVP23A-201ENST00000299866 MRC1P22897 1456 aa14.8□□□□□ -0.04
TVP23A-201ENST00000299866 FAM237AA0A1B0GTK4 181 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 FOXP2O15409 715 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 MORC3Q14149 939 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 RASGRP2Q7LDG7 609 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 NKX2-3Q8TAU0 364 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 HINFPQ9BQA5 517 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 MYO6Q9UM54 1294 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 KDM3BQ7LBC6 1761 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 CASP1P29466 404 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 AFMP43652 599 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 FXR1P51114 621 aaKnown RBP eCLIP14.79□□□□□ -0.04
TVP23A-201ENST00000299866 WHAMMP3Q1A5X7 153 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 RABL6Q3YEC7 729 aaPredicted RBP14.79□□□□□ -0.04
TVP23A-201ENST00000299866 CPLX2Q6PUV4 134 aaKnown RBP14.79□□□□□ -0.04
TVP23A-201ENST00000299866 NFXL1Q6ZNB6 911 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 ATG9AQ7Z3C6 839 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 CCDC148Q8NFR7 591 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 SLF1Q9BQI6 1058 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 PXDNQ92626 1479 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 MED1Q15648 1581 aaPredicted RBP14.79□□□□□ -0.04
TVP23A-201ENST00000299866 HEG1Q9ULI3 1381 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 ENC1O14682 589 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 MFAP3LO75121 409 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 CCT6AP40227 531 aaKnown RBP14.79□□□□□ -0.04
TVP23A-201ENST00000299866 SMYD4Q8IYR2 804 aaPredicted RBP14.79□□□□□ -0.04
TVP23A-201ENST00000299866 FBXL16Q8N461 479 aa14.79□□□□□ -0.04
TVP23A-201ENST00000299866 MSL3Q8N5Y2 521 aaKnown RBP14.79□□□□□ -0.04
TVP23A-201ENST00000299866 NAA15Q9BXJ9 866 aaKnown RBP14.79□□□□□ -0.04
TVP23A-201ENST00000299866 DIP2BQ9P265 1576 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 TNRQ92752 1358 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 CDC25AP30304 524 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 IARSP41252 1262 aaKnown RBP14.78□□□□□ -0.04
TVP23A-201ENST00000299866 CCT5P48643 541 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 USP49Q70CQ1 688 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 GSPT2Q8IYD1 628 aaKnown RBP14.78□□□□□ -0.04
TVP23A-201ENST00000299866 GUCA1BQ9UMX6 200 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 A0A087WUV0 522 aaPredicted RBP14.78□□□□□ -0.04
TVP23A-201ENST00000299866 BTBD18B2RXH4 712 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 PLCD1P51178 756 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 TUBB2AQ13885 445 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 ZNF790Q6PG37 636 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 TUBB2BQ9BVA1 445 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 SLC26A6Q9BXS9 759 aa14.78□□□□□ -0.04
TVP23A-201ENST00000299866 PUS7LQ9H0K6 701 aaKnown RBP14.78□□□□□ -0.04
TVP23A-201ENST00000299866 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.78□□□□□ -0.04
TVP23A-201ENST00000299866 TTF2Q9UNY4 1162 aaKnown RBP14.78□□□□□ -0.04
TVP23A-201ENST00000299866 MMS22LQ6ZRQ5 1243 aa14.77□□□□□ -0.04
TVP23A-201ENST00000299866 CCDC82Q8N4S0 544 aa14.77□□□□□ -0.04
TVP23A-201ENST00000299866 CAPZA3Q96KX2 299 aa14.77□□□□□ -0.04
TVP23A-201ENST00000299866 HDAC6Q9UBN7 1215 aa14.77□□□□□ -0.04
TVP23A-201ENST00000299866 TRIM10Q9UDY6 481 aa14.77□□□□□ -0.04
TVP23A-201ENST00000299866 ZMYM6O95789 1325 aa14.77□□□□□ -0.04
TVP23A-201ENST00000299866 CDKL5O76039 1030 aa14.77□□□□□ -0.04
TVP23A-201ENST00000299866 APPP05067 770 aa14.77□□□□□ -0.04
TVP23A-201ENST00000299866 TUBB4BP68371 445 aa14.77□□□□□ -0.04
TVP23A-201ENST00000299866 FILIP1LQ4L180 1135 aa14.77□□□□□ -0.04
TVP23A-201ENST00000299866 KCNJ14Q9UNX9 436 aa14.77□□□□□ -0.04
TVP23A-201ENST00000299866 FAM69CQ0P6D2 419 aa14.77□□□□□ -0.05
TVP23A-201ENST00000299866 CYB5R4Q7L1T6 521 aa14.77□□□□□ -0.05
TVP23A-201ENST00000299866 ANGEL1Q9UNK9 670 aaKnown RBP14.77□□□□□ -0.05
TVP23A-201ENST00000299866 RGPD8O14715 1765 aaPredicted RBP14.76□□□□□ -0.05
TVP23A-201ENST00000299866 SRGAP2O75044 1071 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 ERLIN2O94905 339 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 GYPCP04921 128 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 SARSP49591 514 aaKnown RBP14.76□□□□□ -0.05
TVP23A-201ENST00000299866 ERVK-24P63145 666 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 STIM1Q13586 685 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.76□□□□□ -0.05
TVP23A-201ENST00000299866 PUS3Q9BZE2 481 aaKnown RBP14.76□□□□□ -0.05
TVP23A-201ENST00000299866 EHD4Q9H223 541 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 WWC3Q9ULE0 1092 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 PRPF6O94906 941 aaKnown RBP14.76□□□□□ -0.05
TVP23A-201ENST00000299866 GGCXP38435 758 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 MCTP2Q6DN12 878 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 LMOD2Q6P5Q4 547 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 ZNF496Q96IT1 587 aaPredicted RBP14.76□□□□□ -0.05
TVP23A-201ENST00000299866 NUP88Q99567 741 aaPredicted RBP14.76□□□□□ -0.05
TVP23A-201ENST00000299866 CRACR2AQ9BSW2 395 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 ADD3Q9UEY8 706 aaKnown RBP14.76□□□□□ -0.05
TVP23A-201ENST00000299866 HPCAL4Q9UM19 191 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 GOLGA8AA7E2F4 631 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 EXOC5O00471 708 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
TVP23A-201ENST00000299866 MNAT1P51948 309 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 APTXQ7Z2E3 356 aaKnown RBP14.76□□□□□ -0.05
TVP23A-201ENST00000299866 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 EID1Q9Y6B2 187 aa14.76□□□□□ -0.05
TVP23A-201ENST00000299866 RANBP6O60518 1105 aaKnown RBP14.75□□□□□ -0.05
TVP23A-201ENST00000299866 ARHGAP25P42331 645 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 EIF5P55010 431 aaKnown RBP14.75□□□□□ -0.05
TVP23A-201ENST00000299866 SPATA1Q5VX52 437 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 TTC19Q6DKK2 380 aaPredicted RBP14.75□□□□□ -0.05
TVP23A-201ENST00000299866 PI16Q6UXB8 463 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 CNGA4Q8IV77 575 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 CTCFLQ8NI51 663 aaPredicted RBP14.75□□□□□ -0.05
TVP23A-201ENST00000299866 TFR2Q9UP52 801 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 SYNRGQ9UMZ2 1314 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms