RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 ZMYM6O95789 1325 aa23.16■■□□□ 1.3
HPS6-201ENST00000299238 COL4A1P02462 1669 aa23.16■■□□□ 1.3
HPS6-201ENST00000299238 ZRANB2O95218 330 aaKnown RBP eCLIP23.16■■□□□ 1.3
HPS6-201ENST00000299238 MAGEB6Q8N7X4 407 aa23.16■■□□□ 1.3
HPS6-201ENST00000299238 RRP15Q9Y3B9 282 aaKnown RBP23.16■■□□□ 1.3
HPS6-201ENST00000299238 SPTLC2O15270 562 aa23.15■■□□□ 1.3
HPS6-201ENST00000299238 GUCY2CP25092 1073 aa23.15■■□□□ 1.3
HPS6-201ENST00000299238 IGHMBP2P38935 993 aaKnown RBP23.15■■□□□ 1.3
HPS6-201ENST00000299238 CT47A1Q5JQC4 288 aaPredicted RBP23.15■■□□□ 1.3
HPS6-201ENST00000299238 SENP2Q9HC62 589 aa23.15■■□□□ 1.3
HPS6-201ENST00000299238 BIN1O00499 593 aa23.15■■□□□ 1.3
HPS6-201ENST00000299238 MAP3K12Q12852 859 aa23.15■■□□□ 1.3
HPS6-201ENST00000299238 INCENPQ9NQS7 918 aa23.15■■□□□ 1.3
HPS6-201ENST00000299238 CASZ1Q86V15 1759 aa23.15■■□□□ 1.3
HPS6-201ENST00000299238 CEP57L1Q8IYX8 460 aa23.14■■□□□ 1.3
HPS6-201ENST00000299238 ECM29Q5VYK3 1845 aa23.14■■□□□ 1.3
HPS6-201ENST00000299238 MBD4O95243 580 aa23.14■■□□□ 1.29
HPS6-201ENST00000299238 TPM4P67936 248 aa23.14■■□□□ 1.29
HPS6-201ENST00000299238 BARGINQ6ZT62 677 aa23.14■■□□□ 1.29
HPS6-201ENST00000299238 PACS2Q86VP3 889 aa23.14■■□□□ 1.29
HPS6-201ENST00000299238 EPB41L4AQ9HCS5 686 aaPredicted RBP23.14■■□□□ 1.29
HPS6-201ENST00000299238 JRKLQ9Y4A0 524 aa23.14■■□□□ 1.29
HPS6-201ENST00000299238 A0A1B0GUL6 1792 aa23.14■■□□□ 1.29
HPS6-201ENST00000299238 TIAM2Q8IVF5 1701 aa23.14■■□□□ 1.29
HPS6-201ENST00000299238 AXDND1Q5T1B0 1012 aaPredicted RBP23.13■■□□□ 1.29
HPS6-201ENST00000299238 ANO1Q5XXA6 986 aa23.13■■□□□ 1.29
HPS6-201ENST00000299238 APOA5Q6Q788 366 aa23.13■■□□□ 1.29
HPS6-201ENST00000299238 CCAR2Q8N163 923 aaKnown RBP23.13■■□□□ 1.29
HPS6-201ENST00000299238 B4E1Z4 1266 aa23.13■■□□□ 1.29
HPS6-201ENST00000299238 KCNQ2O43526 872 aa23.13■■□□□ 1.29
HPS6-201ENST00000299238 OAS2P29728 719 aaKnown RBP23.13■■□□□ 1.29
HPS6-201ENST00000299238 ALX1Q15699 326 aa23.13■■□□□ 1.29
HPS6-201ENST00000299238 DPCR1Q3MIW9 517 aa23.13■■□□□ 1.29
HPS6-201ENST00000299238 CTR9Q6PD62 1173 aa23.13■■□□□ 1.29
HPS6-201ENST00000299238 CLGNO14967 610 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 MARCKSP29966 332 aaPredicted RBP23.12■■□□□ 1.29
HPS6-201ENST00000299238 METAP2P50579 478 aaKnown RBP eCLIP23.12■■□□□ 1.29
HPS6-201ENST00000299238 KIAA1468Q9P260 1216 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 BCL9LQ86UU0 1499 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 SASH3O75995 380 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 CDC27P30260 824 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 BCAMP50895 628 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 ISM2Q6H9L7 571 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 SYNE3Q6ZMZ3 975 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 SMARCC1Q92922 1105 aaPredicted RBP23.12■■□□□ 1.29
HPS6-201ENST00000299238 PHKBQ93100 1093 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 CCZ1BP86790 482 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 CCZ1P86791 482 aaPredicted RBP23.12■■□□□ 1.29
HPS6-201ENST00000299238 REXO1L1PQ8IX06 675 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 IGDCC4Q8TDY8 1250 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 MYL10Q9BUA6 226 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 ARMT1Q9H993 441 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 ZNF652Q9Y2D9 606 aa23.12■■□□□ 1.29
HPS6-201ENST00000299238 ZNF831Q5JPB2 1677 aa23.11■■□□□ 1.29
HPS6-201ENST00000299238 PATL2C9JE40 543 aaKnown RBP23.11■■□□□ 1.29
HPS6-201ENST00000299238 UBE2Q2LH0YL09 131 aa23.11■■□□□ 1.29
HPS6-201ENST00000299238 CHRNDQ07001 517 aa23.11■■□□□ 1.29
HPS6-201ENST00000299238 TMCO3Q6UWJ1 677 aa23.11■■□□□ 1.29
HPS6-201ENST00000299238 MICU3Q86XE3 530 aa23.11■■□□□ 1.29
HPS6-201ENST00000299238 IFNL3Q8IZI9 196 aa23.11■■□□□ 1.29
HPS6-201ENST00000299238 NAPBQ9H115 298 aa23.11■■□□□ 1.29
HPS6-201ENST00000299238 CCDC69A6NI79 296 aa23.11■■□□□ 1.29
HPS6-201ENST00000299238 CCDC34Q96HJ3 373 aa23.11■■□□□ 1.29
HPS6-201ENST00000299238 TMEM87BQ96K49 555 aa23.11■■□□□ 1.29
HPS6-201ENST00000299238 ALG1Q9BT22 464 aa23.11■■□□□ 1.29
HPS6-201ENST00000299238 NAT10Q9H0A0 1025 aaKnown RBP23.1■■□□□ 1.29
HPS6-201ENST00000299238 EPC1Q9H2F5 836 aa23.1■■□□□ 1.29
HPS6-201ENST00000299238 MROH7-TTC4A0A0A0MT08 1334 aa23.1■■□□□ 1.29
HPS6-201ENST00000299238 CMA1P23946 247 aa23.1■■□□□ 1.29
HPS6-201ENST00000299238 NTRK3Q16288 839 aa23.1■■□□□ 1.29
HPS6-201ENST00000299238 L2HGDHQ9H9P8 463 aa23.1■■□□□ 1.29
HPS6-201ENST00000299238 LY9Q9HBG7 655 aa23.1■■□□□ 1.29
HPS6-201ENST00000299238 WDHD1O75717 1129 aaPredicted RBP23.09■■□□□ 1.29
HPS6-201ENST00000299238 CDKL5O76039 1030 aa23.09■■□□□ 1.29
HPS6-201ENST00000299238 ZNF202O95125 648 aa23.09■■□□□ 1.29
HPS6-201ENST00000299238 SLC39A14Q15043 492 aa23.09■■□□□ 1.29
HPS6-201ENST00000299238 SGMS1Q86VZ5 419 aa23.09■■□□□ 1.29
HPS6-201ENST00000299238 VPS37DQ86XT2 251 aa23.09■■□□□ 1.29
HPS6-201ENST00000299238 FAM217BQ9NTX9 383 aaPredicted RBP23.09■■□□□ 1.29
HPS6-201ENST00000299238 TAF1P21675 1872 aa23.09■■□□□ 1.29
HPS6-201ENST00000299238 E2F4Q16254 413 aa23.09■■□□□ 1.29
HPS6-201ENST00000299238 KRT40Q6A162 431 aa23.09■■□□□ 1.29
HPS6-201ENST00000299238 PFKFB1P16118 471 aa23.08■■□□□ 1.29
HPS6-201ENST00000299238 CTDSPL2Q05D32 466 aa23.08■■□□□ 1.29
HPS6-201ENST00000299238 BPIFA3Q9BQP9 254 aa23.08■■□□□ 1.29
HPS6-201ENST00000299238 TACC3Q9Y6A5 838 aa23.08■■□□□ 1.29
HPS6-201ENST00000299238 GSG1L2A8MUP6 293 aa23.08■■□□□ 1.28
HPS6-201ENST00000299238 LMAN1P49257 510 aa23.08■■□□□ 1.28
HPS6-201ENST00000299238 LCORLQ8N3X6 602 aa23.08■■□□□ 1.28
HPS6-201ENST00000299238 UBXN6Q9BZV1 441 aa23.08■■□□□ 1.28
HPS6-201ENST00000299238 ZBTB43O43298 467 aa23.07■■□□□ 1.28
HPS6-201ENST00000299238 RANBP6O60518 1105 aaKnown RBP23.07■■□□□ 1.28
HPS6-201ENST00000299238 GPS2Q13227 327 aa23.07■■□□□ 1.28
HPS6-201ENST00000299238 ZRSR1Q15695 479 aaKnown RBP23.07■■□□□ 1.28
HPS6-201ENST00000299238 STK11IPQ8N1F8 1099 aa23.07■■□□□ 1.28
HPS6-201ENST00000299238 LINC00116Q8NCU8 138 aa23.07■■□□□ 1.28
HPS6-201ENST00000299238 CDC5LQ99459 802 aaKnown RBP23.07■■□□□ 1.28
HPS6-201ENST00000299238 CWC15Q9P013 229 aaKnown RBP23.07■■□□□ 1.28
HPS6-201ENST00000299238 SCN7AQ01118 1682 aa23.07■■□□□ 1.28
HPS6-201ENST00000299238 PRKAB2O43741 272 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms