RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 IPO7O95373 1038 aaKnown RBP11.51□□□□□ -0.57
CLDN1-201ENST00000295522 HPDP32754 393 aaPredicted RBP11.51□□□□□ -0.57
CLDN1-201ENST00000295522 SLC7A5Q01650 507 aa11.51□□□□□ -0.57
CLDN1-201ENST00000295522 TFCP2Q12800 502 aa11.51□□□□□ -0.57
CLDN1-201ENST00000295522 CCDC122Q5T0U0 273 aa11.51□□□□□ -0.57
CLDN1-201ENST00000295522 VPS37DQ86XT2 251 aa11.51□□□□□ -0.57
CLDN1-201ENST00000295522 FOXP4Q8IVH2 680 aaPredicted RBP11.51□□□□□ -0.57
CLDN1-201ENST00000295522 TBC1D31Q96DN5 1066 aa11.51□□□□□ -0.57
CLDN1-201ENST00000295522 SERTAD1Q9UHV2 236 aa11.51□□□□□ -0.57
CLDN1-201ENST00000295522 MROH1Q8NDA8 1641 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 EDC4Q6P2E9 1401 aaKnown RBP11.5□□□□□ -0.57
CLDN1-201ENST00000295522 SLC9C2Q5TAH2 1124 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 TTF2Q9UNY4 1162 aaKnown RBP11.5□□□□□ -0.57
CLDN1-201ENST00000295522 CHUKO15111 745 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 MYBL2P10244 700 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 MCM3P25205 808 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 GCKP35557 465 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 CEBPAP49715 358 aaPredicted RBP11.5□□□□□ -0.57
CLDN1-201ENST00000295522 FKBP4Q02790 459 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLDN1-201ENST00000295522 POSTNQ15063 836 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 B4GALNT4Q76KP1 1039 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 BRAPQ7Z569 592 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 SNRKQ9NRH2 765 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 MAN1B1Q9UKM7 699 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 HECW2Q9P2P5 1572 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 MLH3Q9UHC1 1453 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 ZNF185O15231 689 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 EZRP15311 586 aaKnown RBP11.5□□□□□ -0.57
CLDN1-201ENST00000295522 RRP36Q96EU6 259 aaKnown RBP11.5□□□□□ -0.57
CLDN1-201ENST00000295522 PPANQ9NQ55 473 aaKnown RBP11.5□□□□□ -0.57
CLDN1-201ENST00000295522 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLDN1-201ENST00000295522 MAPK8IP1Q9UQF2 711 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 SAR1BQ9Y6B6 198 aa11.5□□□□□ -0.57
CLDN1-201ENST00000295522 GRM8O00222 908 aa11.49□□□□□ -0.57
CLDN1-201ENST00000295522 EIF3HO15372 352 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLDN1-201ENST00000295522 PRC1O43663 620 aa11.49□□□□□ -0.57
CLDN1-201ENST00000295522 KRT9P35527 623 aa11.49□□□□□ -0.57
CLDN1-201ENST00000295522 SF3B2Q13435 895 aaKnown RBP11.49□□□□□ -0.57
CLDN1-201ENST00000295522 SLC39A14Q15043 492 aa11.49□□□□□ -0.57
CLDN1-201ENST00000295522 PROSER3Q2NL68 480 aa11.49□□□□□ -0.57
CLDN1-201ENST00000295522 DBNLQ9UJU6 430 aaKnown RBP11.49□□□□□ -0.57
CLDN1-201ENST00000295522 TUBBP07437 444 aa11.49□□□□□ -0.57
CLDN1-201ENST00000295522 BMP6P22004 513 aa11.49□□□□□ -0.57
CLDN1-201ENST00000295522 FXR1P51114 621 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLDN1-201ENST00000295522 KIF23Q02241 960 aaPredicted RBP11.49□□□□□ -0.57
CLDN1-201ENST00000295522 MPRIPQ6WCQ1 1025 aa11.49□□□□□ -0.57
CLDN1-201ENST00000295522 ARHGEF25Q86VW2 580 aa11.49□□□□□ -0.57
CLDN1-201ENST00000295522 ZKSCAN4Q969J2 545 aaPredicted RBP11.49□□□□□ -0.57
CLDN1-201ENST00000295522 BTBD11A6QL63 1104 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 HSF2BPO75031 334 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 ATP1A1P05023 1023 aaKnown RBP11.48□□□□□ -0.57
CLDN1-201ENST00000295522 GPTP24298 496 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 PIP4K2AP48426 406 aaPredicted RBP11.48□□□□□ -0.57
CLDN1-201ENST00000295522 USP14P54578 494 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 GUCY1A3Q02108 690 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 MICALCLQ6ZW33 695 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 RNF217Q8TC41 542 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 TRIM6Q9C030 488 aaPredicted RBP11.48□□□□□ -0.57
CLDN1-201ENST00000295522 LGR6Q9HBX8 967 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 KLC4Q9NSK0 619 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 BCCIPQ9P287 314 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLDN1-201ENST00000295522 METP08581 1390 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 MED23Q9ULK4 1368 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 USP42Q9H9J4 1324 aaKnown RBP11.48□□□□□ -0.57
CLDN1-201ENST00000295522 E7EVH7 732 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 BACH1O14867 736 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 PRPF6O94906 941 aaKnown RBP11.48□□□□□ -0.57
CLDN1-201ENST00000295522 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
CLDN1-201ENST00000295522 SEC24CP53992 1094 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 NAP1L1P55209 391 aaKnown RBP11.48□□□□□ -0.57
CLDN1-201ENST00000295522 CCDC40Q4G0X9 1142 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 CCDC181Q5TID7 509 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 CNGA4Q8IV77 575 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 JAKMIP2Q96AA8 810 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 MIEF2Q96C03 454 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 EEF2KMTQ96G04 330 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 MYL10Q9BUA6 226 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 TAB2Q9NYJ8 693 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 TUBE1Q9UJT0 475 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 RICTORQ6R327 1708 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 ARHGEF28Q8N1W1 1705 aaKnown RBP11.48□□□□□ -0.57
CLDN1-201ENST00000295522 PRR36Q9H6K5 1346 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 A0A1B0GUA9 196 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 IDEP14735 1019 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 TBX2Q13207 712 aaPredicted RBP11.48□□□□□ -0.57
CLDN1-201ENST00000295522 CCDC121Q6ZUS5 278 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 IFT81Q8WYA0 676 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 ALDH8A1Q9H2A2 487 aaPredicted RBP11.48□□□□□ -0.57
CLDN1-201ENST00000295522 WWC3Q9ULE0 1092 aa11.48□□□□□ -0.57
CLDN1-201ENST00000295522 MFAP3LO75121 409 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 PDHBP11177 359 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 TUBB4BP68371 445 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 PPARAQ07869 468 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 NEXNQ0ZGT2 675 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 KRT40Q6A162 431 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 ABTB2Q8N961 1025 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 ARHGEF10O15013 1369 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 EIF4E1BA6NMX2 242 aaKnown RBP11.47□□□□□ -0.57
CLDN1-201ENST00000295522 OPA1O60313 960 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 ARHGAP25P42331 645 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms