RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 SNCAIPQ9Y6H5 919 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 CCL15-CCL14A0A0B4J2E2 113 aa11.95□□□□□ -0.5
CCDC58-201ENST00000291458 CCDC85CA6NKD9 419 aa11.95□□□□□ -0.5
CCDC58-201ENST00000291458 WDHD1O75717 1129 aaPredicted RBP11.95□□□□□ -0.5
CCDC58-201ENST00000291458 IDH1O75874 414 aaKnown RBP11.95□□□□□ -0.5
CCDC58-201ENST00000291458 CYP2E1P05181 493 aaPredicted RBP11.95□□□□□ -0.5
CCDC58-201ENST00000291458 CCL15Q16663 113 aa11.95□□□□□ -0.5
CCDC58-201ENST00000291458 SLC4A8Q2Y0W8 1093 aa11.95□□□□□ -0.5
CCDC58-201ENST00000291458 NAA16Q6N069 864 aaPredicted RBP11.95□□□□□ -0.5
CCDC58-201ENST00000291458 SIRT2Q8IXJ6 389 aa11.95□□□□□ -0.5
CCDC58-201ENST00000291458 TEX11Q8IYF3 940 aa11.95□□□□□ -0.5
CCDC58-201ENST00000291458 HOOK2Q96ED9 719 aa11.95□□□□□ -0.5
CCDC58-201ENST00000291458 AATFQ9NY61 560 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCDC58-201ENST00000291458 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.95□□□□□ -0.5
CCDC58-201ENST00000291458 FOCADQ5VW36 1801 aa11.95□□□□□ -0.5
CCDC58-201ENST00000291458 DDTLA6NHG4 134 aaPredicted RBP11.94□□□□□ -0.5
CCDC58-201ENST00000291458 IFIT2P09913 472 aaKnown RBP11.94□□□□□ -0.5
CCDC58-201ENST00000291458 TM4SF4P48230 202 aa11.94□□□□□ -0.5
CCDC58-201ENST00000291458 HSP90AB4PQ58FF6 505 aa11.94□□□□□ -0.5
CCDC58-201ENST00000291458 SH3BP5LQ7L8J4 393 aa11.94□□□□□ -0.5
CCDC58-201ENST00000291458 ADGRA1Q86SQ6 560 aa11.94□□□□□ -0.5
CCDC58-201ENST00000291458 SH3RF3Q8TEJ3 882 aaPredicted RBP11.94□□□□□ -0.5
CCDC58-201ENST00000291458 ZNF296Q8WUU4 475 aaPredicted RBP11.94□□□□□ -0.5
CCDC58-201ENST00000291458 DNAJC2Q99543 621 aaKnown RBP11.94□□□□□ -0.5
CCDC58-201ENST00000291458 ANTXR1Q9H6X2 564 aa11.94□□□□□ -0.5
CCDC58-201ENST00000291458 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.94□□□□□ -0.5
CCDC58-201ENST00000291458 ZSWIM8A7E2V4 1837 aa11.94□□□□□ -0.5
CCDC58-201ENST00000291458 NAV1Q8NEY1 1877 aa11.93□□□□□ -0.5
CCDC58-201ENST00000291458 SIPA1L1O43166 1804 aa11.93□□□□□ -0.5
CCDC58-201ENST00000291458 GPR75-ASB3A0A0A6YYF3 556 aa11.93□□□□□ -0.5
CCDC58-201ENST00000291458 SPDYE5A6NIY4 337 aa11.93□□□□□ -0.5
CCDC58-201ENST00000291458 GPR25O00155 361 aa11.93□□□□□ -0.5
CCDC58-201ENST00000291458 SMARCA5O60264 1052 aaPredicted RBP11.93□□□□□ -0.5
CCDC58-201ENST00000291458 LDHCP07864 332 aa11.93□□□□□ -0.5
CCDC58-201ENST00000291458 RHBDL3P58872 404 aa11.93□□□□□ -0.5
CCDC58-201ENST00000291458 CCDC84Q86UT8 332 aaPredicted RBP11.93□□□□□ -0.5
CCDC58-201ENST00000291458 RPAP2Q8IXW5 612 aaPredicted RBP11.93□□□□□ -0.5
CCDC58-201ENST00000291458 CLASRPQ8N2M8 674 aaKnown RBP11.93□□□□□ -0.5
CCDC58-201ENST00000291458 MIGA1Q8NAN2 632 aa11.93□□□□□ -0.5
CCDC58-201ENST00000291458 BRI3BPQ8WY22 251 aa11.93□□□□□ -0.5
CCDC58-201ENST00000291458 KIF1BPQ96EK5 621 aa11.93□□□□□ -0.5
CCDC58-201ENST00000291458 CHMP4BQ9H444 224 aaKnown RBP11.93□□□□□ -0.5
CCDC58-201ENST00000291458 MYH1P12882 1939 aa11.93□□□□□ -0.5
CCDC58-201ENST00000291458 ENTPD3O75355 529 aa11.92□□□□□ -0.5
CCDC58-201ENST00000291458 CYP7A1P22680 504 aa11.92□□□□□ -0.5
CCDC58-201ENST00000291458 RRP1P56182 461 aaKnown RBP11.92□□□□□ -0.5
CCDC58-201ENST00000291458 DYNLL1P63167 89 aaKnown RBP11.92□□□□□ -0.5
CCDC58-201ENST00000291458 CRHR2Q13324 411 aa11.92□□□□□ -0.5
CCDC58-201ENST00000291458 PDE3AQ14432 1141 aa11.92□□□□□ -0.5
CCDC58-201ENST00000291458 MAPKAPK5Q8IW41 473 aa11.92□□□□□ -0.5
CCDC58-201ENST00000291458 MAGEB6Q8N7X4 407 aa11.92□□□□□ -0.5
CCDC58-201ENST00000291458 PTPN18Q99952 460 aa11.92□□□□□ -0.5
CCDC58-201ENST00000291458 IDI2Q9BXS1 227 aa11.92□□□□□ -0.5
CCDC58-201ENST00000291458 SAP30BPQ9UHR5 308 aaKnown RBP11.92□□□□□ -0.5
CCDC58-201ENST00000291458 MYH7P12883 1935 aa11.92□□□□□ -0.5
CCDC58-201ENST00000291458 ATRNL1Q5VV63 1379 aa11.92□□□□□ -0.5
CCDC58-201ENST00000291458 GOLIM4O00461 696 aa11.91□□□□□ -0.5
CCDC58-201ENST00000291458 IRF6O14896 467 aa11.91□□□□□ -0.5
CCDC58-201ENST00000291458 FKTNO75072 461 aa11.91□□□□□ -0.5
CCDC58-201ENST00000291458 ALDH1A1P00352 501 aa11.91□□□□□ -0.5
CCDC58-201ENST00000291458 GTF2A2P52657 109 aa11.91□□□□□ -0.5
CCDC58-201ENST00000291458 TAF1CQ15572 869 aaPredicted RBP11.91□□□□□ -0.5
CCDC58-201ENST00000291458 OTUD7BQ6GQQ9 843 aa11.91□□□□□ -0.5
CCDC58-201ENST00000291458 CTU1Q7Z7A3 348 aaKnown RBP11.91□□□□□ -0.5
CCDC58-201ENST00000291458 ERO1BQ86YB8 467 aa11.91□□□□□ -0.5
CCDC58-201ENST00000291458 FAM43AQ8N2R8 423 aa11.91□□□□□ -0.5
CCDC58-201ENST00000291458 TGFBRAP1Q8WUH2 860 aa11.91□□□□□ -0.5
CCDC58-201ENST00000291458 EDC3Q96F86 508 aaKnown RBP11.91□□□□□ -0.5
CCDC58-201ENST00000291458 FAM163AQ96GL9 167 aaPredicted RBP11.91□□□□□ -0.5
CCDC58-201ENST00000291458 OSBPL5Q9H0X9 879 aaPredicted RBP11.91□□□□□ -0.5
CCDC58-201ENST00000291458 PTPRFP10586 1907 aa11.91□□□□□ -0.5
CCDC58-201ENST00000291458 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.5
CCDC58-201ENST00000291458 UNCXA6NJT0 531 aa11.9□□□□□ -0.5
CCDC58-201ENST00000291458 BAG3O95817 575 aa11.9□□□□□ -0.5
CCDC58-201ENST00000291458 PPIL2Q13356 520 aa11.9□□□□□ -0.5
CCDC58-201ENST00000291458 SNAPC2Q13487 334 aa11.9□□□□□ -0.5
CCDC58-201ENST00000291458 CD99L2Q8TCZ2 262 aa11.9□□□□□ -0.5
CCDC58-201ENST00000291458 CRBNQ96SW2 442 aa11.9□□□□□ -0.5
CCDC58-201ENST00000291458 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCDC58-201ENST00000291458 PICK1Q9NRD5 415 aa11.9□□□□□ -0.5
CCDC58-201ENST00000291458 FLT1P17948 1338 aa11.89□□□□□ -0.51
CCDC58-201ENST00000291458 BTBD19C9JJ37 291 aa11.89□□□□□ -0.51
CCDC58-201ENST00000291458 RAB11FIP3O75154 756 aa11.89□□□□□ -0.51
CCDC58-201ENST00000291458 CETPP11597 493 aa11.89□□□□□ -0.51
CCDC58-201ENST00000291458 INHBEP58166 350 aa11.89□□□□□ -0.51
CCDC58-201ENST00000291458 TSHZ3Q63HK5 1081 aa11.89□□□□□ -0.51
CCDC58-201ENST00000291458 SCYL3Q8IZE3 742 aa11.89□□□□□ -0.51
CCDC58-201ENST00000291458 ZNF512BQ96KM6 892 aaPredicted RBP11.89□□□□□ -0.51
CCDC58-201ENST00000291458 TRIM34Q9BYJ4 488 aa11.89□□□□□ -0.51
CCDC58-201ENST00000291458 BOLA2Q9H3K6 86 aa11.89□□□□□ -0.51
CCDC58-201ENST00000291458 TRIM75PA6NK02 468 aa11.88□□□□□ -0.51
CCDC58-201ENST00000291458 USP5P45974 858 aa11.88□□□□□ -0.51
CCDC58-201ENST00000291458 SOX10P56693 466 aa11.88□□□□□ -0.51
CCDC58-201ENST00000291458 MAP3K12Q12852 859 aa11.88□□□□□ -0.51
CCDC58-201ENST00000291458 SLFNL1Q499Z3 407 aa11.88□□□□□ -0.51
CCDC58-201ENST00000291458 NOL9Q5SY16 702 aaKnown RBP11.88□□□□□ -0.51
CCDC58-201ENST00000291458 GADL1Q6ZQY3 521 aa11.88□□□□□ -0.51
CCDC58-201ENST00000291458 LRRCC1Q9C099 1032 aa11.88□□□□□ -0.51
CCDC58-201ENST00000291458 ZNF112Q9UJU3 913 aa11.88□□□□□ -0.51
CCDC58-201ENST00000291458 TRIM17Q9Y577 477 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms