RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 PRRT2Q7Z6L0 340 aaPredicted RBP12.77□□□□□ -0.37
SNF8-201ENST00000290330 CCDC84Q86UT8 332 aaPredicted RBP12.77□□□□□ -0.37
SNF8-201ENST00000290330 MAPKAPK5Q8IW41 473 aa12.77□□□□□ -0.37
SNF8-201ENST00000290330 CLASRPQ8N2M8 674 aaKnown RBP12.77□□□□□ -0.37
SNF8-201ENST00000290330 TGFBRAP1Q8WUH2 860 aa12.77□□□□□ -0.37
SNF8-201ENST00000290330 KIF1BPQ96EK5 621 aa12.77□□□□□ -0.37
SNF8-201ENST00000290330 ARHGAP39Q9C0H5 1083 aa12.77□□□□□ -0.37
SNF8-201ENST00000290330 DHX36Q9H2U1 1008 aaKnown RBP12.77□□□□□ -0.37
SNF8-201ENST00000290330 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.77□□□□□ -0.37
SNF8-201ENST00000290330 PI4KBQ9UBF8 816 aa12.77□□□□□ -0.37
SNF8-201ENST00000290330 CPA4Q9UI42 421 aa12.77□□□□□ -0.37
SNF8-201ENST00000290330 HERC5Q9UII4 1024 aaKnown RBP12.77□□□□□ -0.37
SNF8-201ENST00000290330 ADGRA2Q96PE1 1338 aa12.77□□□□□ -0.37
SNF8-201ENST00000290330 CAP2P40123 477 aa12.76□□□□□ -0.37
SNF8-201ENST00000290330 DYNLL1P63167 89 aaKnown RBP12.76□□□□□ -0.37
SNF8-201ENST00000290330 RRP1BQ14684 758 aaKnown RBP12.76□□□□□ -0.37
SNF8-201ENST00000290330 KIF22Q14807 665 aa12.76□□□□□ -0.37
SNF8-201ENST00000290330 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
SNF8-201ENST00000290330 FLT1P17948 1338 aa12.76□□□□□ -0.37
SNF8-201ENST00000290330 TRIM75PA6NK02 468 aa12.75□□□□□ -0.37
SNF8-201ENST00000290330 RAB11FIP3O75154 756 aa12.75□□□□□ -0.37
SNF8-201ENST00000290330 CYP2C8P10632 490 aa12.75□□□□□ -0.37
SNF8-201ENST00000290330 MAP3K12Q12852 859 aa12.75□□□□□ -0.37
SNF8-201ENST00000290330 MAST2Q6P0Q8 1798 aa12.75□□□□□ -0.37
SNF8-201ENST00000290330 GADL1Q6ZQY3 521 aa12.75□□□□□ -0.37
SNF8-201ENST00000290330 FOXP4Q8IVH2 680 aaPredicted RBP12.75□□□□□ -0.37
SNF8-201ENST00000290330 MAGEB6Q8N7X4 407 aa12.75□□□□□ -0.37
SNF8-201ENST00000290330 MIGA1Q8NAN2 632 aa12.75□□□□□ -0.37
SNF8-201ENST00000290330 ARMC5Q96C12 935 aa12.75□□□□□ -0.37
SNF8-201ENST00000290330 PARK7Q99497 189 aaKnown RBP12.75□□□□□ -0.37
SNF8-201ENST00000290330 PALD1Q9ULE6 856 aa12.75□□□□□ -0.37
SNF8-201ENST00000290330 PTCH2Q9Y6C5 1203 aa12.75□□□□□ -0.37
SNF8-201ENST00000290330 GNRH1P01148 92 aa12.74□□□□□ -0.37
SNF8-201ENST00000290330 IFIT2P09913 472 aaKnown RBP12.74□□□□□ -0.37
SNF8-201ENST00000290330 CTGFP29279 349 aa12.74□□□□□ -0.37
SNF8-201ENST00000290330 SPP2Q13103 211 aa12.74□□□□□ -0.37
SNF8-201ENST00000290330 TMED8Q6PL24 325 aaPredicted RBP12.74□□□□□ -0.37
SNF8-201ENST00000290330 METTL16Q86W50 562 aaKnown RBP12.74□□□□□ -0.37
SNF8-201ENST00000290330 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNF8-201ENST00000290330 DNAJC18Q9H819 358 aa12.74□□□□□ -0.37
SNF8-201ENST00000290330 SLC45A1Q9Y2W3 748 aa12.74□□□□□ -0.37
SNF8-201ENST00000290330 ECM2O94769 699 aaPredicted RBP12.73□□□□□ -0.37
SNF8-201ENST00000290330 BCRP11274 1271 aa12.73□□□□□ -0.37
SNF8-201ENST00000290330 PSMC4P43686 418 aa12.73□□□□□ -0.37
SNF8-201ENST00000290330 PRMT2P55345 433 aa12.73□□□□□ -0.37
SNF8-201ENST00000290330 TTF1Q15361 905 aaPredicted RBP12.73□□□□□ -0.37
SNF8-201ENST00000290330 CERS3Q8IU89 383 aa12.73□□□□□ -0.37
SNF8-201ENST00000290330 ZNF280CQ8ND82 737 aa12.73□□□□□ -0.37
SNF8-201ENST00000290330 TBC1D2Q9BYX2 928 aa12.73□□□□□ -0.37
SNF8-201ENST00000290330 BCL11AQ9H165 835 aa12.73□□□□□ -0.37
SNF8-201ENST00000290330 SAP30BPQ9UHR5 308 aaKnown RBP12.73□□□□□ -0.37
SNF8-201ENST00000290330 AGTPBP1Q9UPW5 1226 aa12.73□□□□□ -0.37
SNF8-201ENST00000290330 DOCK1Q14185 1865 aa12.73□□□□□ -0.37
SNF8-201ENST00000290330 MYO5AQ9Y4I1 1855 aaKnown RBP12.73□□□□□ -0.37
SNF8-201ENST00000290330 POTEFA5A3E0 1075 aa12.72□□□□□ -0.37
SNF8-201ENST00000290330 USP17L5A8MUK1 530 aa12.72□□□□□ -0.37
SNF8-201ENST00000290330 JAG1P78504 1218 aa12.72□□□□□ -0.37
SNF8-201ENST00000290330 SLC9C1Q4G0N8 1177 aa12.72□□□□□ -0.37
SNF8-201ENST00000290330 NBPF11Q86T75 865 aa12.72□□□□□ -0.37
SNF8-201ENST00000290330 CRACR2BQ8N4Y2 399 aaPredicted RBP12.72□□□□□ -0.37
SNF8-201ENST00000290330 PROCA1Q8NCQ7 364 aaPredicted RBP12.72□□□□□ -0.37
SNF8-201ENST00000290330 ZNF333Q96JL9 665 aa12.72□□□□□ -0.37
SNF8-201ENST00000290330 TRIM47Q96LD4 638 aa12.72□□□□□ -0.37
SNF8-201ENST00000290330 RIOK1Q9BRS2 568 aaKnown RBP12.72□□□□□ -0.37
SNF8-201ENST00000290330 GOLIM4O00461 696 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 FMNL1O95466 1100 aaPredicted RBP12.71□□□□□ -0.37
SNF8-201ENST00000290330 HLA-DOAP06340 250 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 ASNSP08243 561 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 PDE6AP16499 860 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 OSBPP22059 807 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 USP5P45974 858 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 SLC4A8Q2Y0W8 1093 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 TREML2Q5T2D2 321 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 SLC9C2Q5TAH2 1124 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 SMCR8Q8TEV9 937 aaPredicted RBP12.71□□□□□ -0.37
SNF8-201ENST00000290330 DNAJC2Q99543 621 aaKnown RBP12.71□□□□□ -0.37
SNF8-201ENST00000290330 WDR18Q9BV38 432 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 AS3MTQ9HBK9 375 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 SRRDQ9UH36 339 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 HTTP42858 3142 aa12.71□□□□□ -0.37
SNF8-201ENST00000290330 PHIPQ8WWQ0 1821 aa12.71□□□□□ -0.38
SNF8-201ENST00000290330 ZSWIM8A7E2V4 1837 aa12.7□□□□□ -0.38
SNF8-201ENST00000290330 SIPA1L1O43166 1804 aa12.7□□□□□ -0.38
SNF8-201ENST00000290330 MAGEB6P1A0A0J9YX57 407 aa12.7□□□□□ -0.38
SNF8-201ENST00000290330 ATP5JP18859 108 aa12.7□□□□□ -0.38
SNF8-201ENST00000290330 HOXD10P28358 340 aa12.7□□□□□ -0.38
SNF8-201ENST00000290330 HMGCS2P54868 508 aa12.7□□□□□ -0.38
SNF8-201ENST00000290330 SHROOM1Q2M3G4 852 aaPredicted RBP12.7□□□□□ -0.38
SNF8-201ENST00000290330 SH3D19Q5HYK7 790 aa12.7□□□□□ -0.38
SNF8-201ENST00000290330 SH3TC2Q8TF17 1288 aa12.7□□□□□ -0.38
SNF8-201ENST00000290330 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
SNF8-201ENST00000290330 LRRCC1Q9C099 1032 aa12.7□□□□□ -0.38
SNF8-201ENST00000290330 BOLA2Q9H3K6 86 aa12.7□□□□□ -0.38
SNF8-201ENST00000290330 GINM1Q9NU53 330 aa12.7□□□□□ -0.38
SNF8-201ENST00000290330 ZNF532Q9HCE3 1301 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 PTPRFP10586 1907 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 TCRBV5S4A2TA0A5A2 114 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 GDF11O95390 407 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 FCGRTP55899 365 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms