RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CEP85LQ5SZL2 805 aa19.6■□□□□ 0.73
PCDHA13-201ENST00000289272 CFAP57Q96MR6 1250 aa19.6■□□□□ 0.73
PCDHA13-201ENST00000289272 FEZ2Q9UHY8 353 aaPredicted RBP19.6■□□□□ 0.73
PCDHA13-201ENST00000289272 SYNRGQ9UMZ2 1314 aa19.6■□□□□ 0.73
PCDHA13-201ENST00000289272 TTLL12Q14166 644 aaPredicted RBP19.6■□□□□ 0.73
PCDHA13-201ENST00000289272 NOX5Q96PH1 765 aa19.6■□□□□ 0.73
PCDHA13-201ENST00000289272 TRPM1Q7Z4N2 1603 aa19.6■□□□□ 0.73
PCDHA13-201ENST00000289272 OGFOD1Q8N543 542 aa19.6■□□□□ 0.73
PCDHA13-201ENST00000289272 PCK1P35558 622 aa19.6■□□□□ 0.73
PCDHA13-201ENST00000289272 CALCOCO2Q13137 446 aa19.6■□□□□ 0.73
PCDHA13-201ENST00000289272 SH2D4BQ5SQS7 431 aa19.6■□□□□ 0.73
PCDHA13-201ENST00000289272 BCORL1Q5H9F3 1711 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 CIB2O75838 187 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 NBPF14Q5TI25 921 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 KLHDC4Q8TBB5 520 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 TMEM87BQ96K49 555 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 SPTLC3Q9NUV7 552 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 PPP2R5BQ15173 497 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 FERMT1Q9BQL6 677 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 MMRN2Q9H8L6 949 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 SLC52A2Q9HAB3 445 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 PARP3Q9Y6F1 533 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 USH1CQ9Y6N9 552 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 MLH3Q9UHC1 1453 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 ZNF202O95125 648 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 PPP2R5EQ16537 467 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 CDC42BPAQ5VT25 1732 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 VGLL3A8MV65 326 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 TSPY3P0CV98 308 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 TSPY8P0CW00 308 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 TIMM10P62072 90 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 GCKRQ14397 625 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 TCERG1LQ5VWI1 586 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 CLEC17AQ6ZS10 378 aa19.59■□□□□ 0.73
PCDHA13-201ENST00000289272 STX10O60499 249 aa19.58■□□□□ 0.73
PCDHA13-201ENST00000289272 ASIC1P78348 528 aa19.58■□□□□ 0.73
PCDHA13-201ENST00000289272 ZBTB16Q05516 673 aa19.58■□□□□ 0.73
PCDHA13-201ENST00000289272 CFAP221Q4G0U5 840 aa19.58■□□□□ 0.73
PCDHA13-201ENST00000289272 LRCH2Q5VUJ6 765 aa19.58■□□□□ 0.73
PCDHA13-201ENST00000289272 UBLCP1Q8WVY7 318 aaPredicted RBP19.58■□□□□ 0.73
PCDHA13-201ENST00000289272 CAPS2Q9BXY5 557 aa19.58■□□□□ 0.73
PCDHA13-201ENST00000289272 YEATS2Q9ULM3 1422 aa19.58■□□□□ 0.72
PCDHA13-201ENST00000289272 RASSF2P50749 326 aa19.58■□□□□ 0.72
PCDHA13-201ENST00000289272 PLCD1P51178 756 aa19.58■□□□□ 0.72
PCDHA13-201ENST00000289272 IL17REQ8NFR9 667 aa19.58■□□□□ 0.72
PCDHA13-201ENST00000289272 XPO4Q9C0E2 1151 aaKnown RBP19.58■□□□□ 0.72
PCDHA13-201ENST00000289272 IQSEC3Q9UPP2 1182 aaPredicted RBP19.58■□□□□ 0.72
PCDHA13-201ENST00000289272 HSPA2P54652 639 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 ARMC9Q7Z3E5 817 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 KBTBD3Q8NAB2 608 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 TMEM87AQ8NBN3 555 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 RAB3IPQ96QF0 476 aaPredicted RBP19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 NAP1L4Q99733 375 aaKnown RBP19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 CUL4AQ13619 759 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 TERF2Q15554 542 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 AP1ARQ63HQ0 302 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 PPP1R14CQ8TAE6 165 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 PPP2R2CQ9Y2T4 447 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 TET3O43151 1660 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 CCDC151A5D8V7 595 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 MXRA7P84157 204 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 FYB2Q5VWT5 728 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 MIPOL1Q8TD10 442 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 BTG4Q9NY30 223 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 KIAA1468Q9P260 1216 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 UTP11Q9Y3A2 253 aaKnown RBP19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 SAR1BQ9Y6B6 198 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 TBCAO75347 108 aaKnown RBP19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 CERS3Q8IU89 383 aa19.57■□□□□ 0.72
PCDHA13-201ENST00000289272 MAGEB6P1A0A0J9YX57 407 aa19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 NOL3O60936 208 aaKnown RBP19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 POLD1P28340 1107 aa19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 TACO1Q9BSH4 297 aaKnown RBP19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 UBA5Q9GZZ9 404 aa19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 ATP2A2P16615 1042 aaKnown RBP19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 SMARCC2Q8TAQ2 1214 aa19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 TSNARE1Q96NA8 513 aa19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 ZC3H12CQ9C0D7 883 aaKnown RBP19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 STX8Q9UNK0 236 aa19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 CAPN7Q9Y6W3 813 aa19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 KRT13P13646 458 aa19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 MAGEB6Q8N7X4 407 aa19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 FERP16591 822 aa19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 ZNF219Q9P2Y4 722 aaPredicted RBP19.56■□□□□ 0.72
PCDHA13-201ENST00000289272 PDLIM2Q96JY6 352 aa19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 VAT1LQ9HCJ6 419 aa19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 SRGAP1Q7Z6B7 1085 aa19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 PARP2Q9UGN5 583 aa19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 PYCARDQ9ULZ3 195 aa19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 HSP90AA4PQ58FG1 418 aa19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 CCDC174Q6PII3 467 aa19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 TRIM58Q8NG06 486 aa19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 VIMP08670 466 aaKnown RBP19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 PHLDB2Q86SQ0 1253 aa19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 RBM17Q96I25 401 aaKnown RBP19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 HAUS4Q9H6D7 363 aa19.55■□□□□ 0.72
PCDHA13-201ENST00000289272 SNCBQ16143 134 aa19.54■□□□□ 0.72
PCDHA13-201ENST00000289272 ORAI2Q96SN7 254 aa19.54■□□□□ 0.72
PCDHA13-201ENST00000289272 SEC62Q99442 399 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms