RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 MROH5Q6ZUA9 1318 aa16.33■□□□□ 0.2
TMEM47-201ENST00000275954 LINC00116Q8NCU8 138 aa16.33■□□□□ 0.2
TMEM47-201ENST00000275954 TTLL11Q8NHH1 800 aa16.33■□□□□ 0.2
TMEM47-201ENST00000275954 RBM17Q96I25 401 aaKnown RBP16.33■□□□□ 0.2
TMEM47-201ENST00000275954 DENND2AQ9ULE3 1009 aa16.33■□□□□ 0.2
TMEM47-201ENST00000275954 THRAP3Q9Y2W1 955 aaKnown RBP16.33■□□□□ 0.2
TMEM47-201ENST00000275954 POLR3GO15318 223 aaPredicted RBP16.33■□□□□ 0.2
TMEM47-201ENST00000275954 DEXIO95424 95 aa16.33■□□□□ 0.2
TMEM47-201ENST00000275954 CHRNDQ07001 517 aa16.33■□□□□ 0.2
TMEM47-201ENST00000275954 PNOCQ13519 176 aa16.33■□□□□ 0.2
TMEM47-201ENST00000275954 NLGN1Q8N2Q7 840 aa16.33■□□□□ 0.2
TMEM47-201ENST00000275954 FEZ1Q99689 392 aa16.33■□□□□ 0.2
TMEM47-201ENST00000275954 COL3A1P02461 1466 aaPredicted RBP16.32■□□□□ 0.2
TMEM47-201ENST00000275954 RIOK3O14730 519 aaKnown RBP16.32■□□□□ 0.2
TMEM47-201ENST00000275954 PFKFB1P16118 471 aa16.32■□□□□ 0.2
TMEM47-201ENST00000275954 RILPL1Q5EBL4 403 aa16.32■□□□□ 0.2
TMEM47-201ENST00000275954 SCARF1Q14162 830 aa16.32■□□□□ 0.2
TMEM47-201ENST00000275954 ADALQ6DHV7 355 aa16.32■□□□□ 0.2
TMEM47-201ENST00000275954 ZNF654Q8IZM8 581 aa16.32■□□□□ 0.2
TMEM47-201ENST00000275954 CELF1Q92879 486 aaKnown RBP16.31■□□□□ 0.2
TMEM47-201ENST00000275954 MRVI1Q9Y6F6 885 aa16.31■□□□□ 0.2
TMEM47-201ENST00000275954 CCT6AP40227 531 aaKnown RBP16.31■□□□□ 0.2
TMEM47-201ENST00000275954 FANCCQ00597 558 aa16.31■□□□□ 0.2
TMEM47-201ENST00000275954 EAPPQ56P03 285 aaPredicted RBP16.31■□□□□ 0.2
TMEM47-201ENST00000275954 CCDC181Q5TID7 509 aa16.31■□□□□ 0.2
TMEM47-201ENST00000275954 LZTFL1Q9NQ48 299 aa16.31■□□□□ 0.2
TMEM47-201ENST00000275954 PYCARDQ9ULZ3 195 aa16.31■□□□□ 0.2
TMEM47-201ENST00000275954 PAXBP1Q9Y5B6 917 aa16.31■□□□□ 0.2
TMEM47-201ENST00000275954 SPATA31A6Q5VVP1 1343 aa16.31■□□□□ 0.2
TMEM47-201ENST00000275954 A0A0G2JLW4 131 aa16.31■□□□□ 0.2
TMEM47-201ENST00000275954 CACNA2D4Q7Z3S7 1137 aa16.31■□□□□ 0.2
TMEM47-201ENST00000275954 KIAA1468Q9P260 1216 aa16.31■□□□□ 0.2
TMEM47-201ENST00000275954 NRKQ7Z2Y5 1582 aa16.31■□□□□ 0.2
TMEM47-201ENST00000275954 MAP2P11137 1827 aaKnown RBP16.3■□□□□ 0.2
TMEM47-201ENST00000275954 AXDND1Q5T1B0 1012 aaPredicted RBP16.3■□□□□ 0.2
TMEM47-201ENST00000275954 XPO4Q9C0E2 1151 aaKnown RBP16.3■□□□□ 0.2
TMEM47-201ENST00000275954 PIH1D3Q9NQM4 214 aaKnown RBP16.3■□□□□ 0.2
TMEM47-201ENST00000275954 DLC1Q96QB1 1528 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
TMEM47-201ENST00000275954 MCAMP43121 646 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 PPARAQ07869 468 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 TMEM266Q2M3C6 531 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 TDRD12Q587J7 1177 aaKnown RBP16.3■□□□□ 0.2
TMEM47-201ENST00000275954 CT47A1Q5JQC4 288 aaPredicted RBP16.3■□□□□ 0.2
TMEM47-201ENST00000275954 ZNF804AQ7Z570 1209 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 CALML4Q96GE6 196 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 GPR108Q9NPR9 543 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 CIAO1O76071 339 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 NFIXQ14938 502 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 APOA5Q6Q788 366 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 SLF2Q8IX21 1173 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 SEPT11Q9NVA2 429 aaKnown RBP16.3■□□□□ 0.2
TMEM47-201ENST00000275954 ERCC3P19447 782 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 ASIC1P78348 528 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 LETM2Q2VYF4 491 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 GPIHBP1Q8IV16 184 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 CCDC102AQ96A19 550 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 NFE2L3Q9Y4A8 694 aa16.3■□□□□ 0.2
TMEM47-201ENST00000275954 CYP2D7A0A087X1C5 515 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 YEATS4O95619 227 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 TNNI2P48788 182 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 FKBP15Q5T1M5 1219 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 ZFYVE27Q5T4F4 411 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 RTL9Q8NET4 1388 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 RPS6KA4O75676 772 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 TRIM21P19474 475 aaKnown RBP16.29■□□□□ 0.2
TMEM47-201ENST00000275954 MFSD14BQ5SR56 506 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 TEX11Q8IYF3 940 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 DEPDC5O75140 1603 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 TFAP4Q01664 338 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 KAZALD1Q96I82 304 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 RAB34Q9BZG1 259 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 ACBD3Q9H3P7 528 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 TNKSO95271 1327 aa16.29■□□□□ 0.2
TMEM47-201ENST00000275954 GSTO1P78417 241 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 PDIA6Q15084 440 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 CALM1P0DP23 149 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 CALM2P0DP24 149 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 CALM3P0DP25 149 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 ADD2P35612 726 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 SPA17Q15506 151 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 C11orf57Q6ZUT1 292 aaPredicted RBP16.28■□□□□ 0.2
TMEM47-201ENST00000275954 IQUBQ8NA54 791 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 FANCBQ8NB91 859 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 ANKRD2Q9GZV1 360 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 VPS16Q9H269 839 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 BMP15O95972 392 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 GNAQP50148 359 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 DYNLL1P63167 89 aaKnown RBP16.28■□□□□ 0.2
TMEM47-201ENST00000275954 CARMIL3Q8ND23 1372 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 SERTAD1Q9UHV2 236 aa16.28■□□□□ 0.2
TMEM47-201ENST00000275954 PPLO60437 1756 aa16.27■□□□□ 0.2
TMEM47-201ENST00000275954 MEGF6O75095 1541 aa16.27■□□□□ 0.2
TMEM47-201ENST00000275954 RASGRF1Q13972 1273 aa16.27■□□□□ 0.2
TMEM47-201ENST00000275954 UBE3CQ15386 1083 aa16.27■□□□□ 0.2
TMEM47-201ENST00000275954 TCERG1LQ5VWI1 586 aa16.27■□□□□ 0.2
TMEM47-201ENST00000275954 TGFBRAP1Q8WUH2 860 aa16.27■□□□□ 0.2
TMEM47-201ENST00000275954 EEF2KMTQ96G04 330 aa16.27■□□□□ 0.2
TMEM47-201ENST00000275954 ZSWIM5Q9P217 1185 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms