RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 GPTP24298 496 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 MCMDC2Q4G0Z9 681 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 RASGRP2Q7LDG7 609 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 GBP3Q9H0R5 595 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 TRIM10Q9UDY6 481 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 MAN1B1Q9UKM7 699 aa10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 CCDC9Q9Y3X0 531 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-201ENST00000274901 MDM2Q00987 491 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 PTPAQ15257 358 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 EPHA10Q5JZY3 1008 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 CADPS2Q86UW7 1296 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 GRAMD1CQ8IYS0 662 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 ZNF274Q96GC6 653 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 XAGE2Q96GT9 111 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 PANX2Q96RD6 677 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 NAPGQ99747 312 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 LGR6Q9HBX8 967 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 HPS5Q9UPZ3 1129 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 CAPN7Q9Y6W3 813 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 MYH8P13535 1937 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 PRAMEF22A3QJZ6 481 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 RNF225M0QZC1 329 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 EBAG9O00559 213 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 INPP5BP32019 993 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 TDO2P48775 406 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 USP14P54578 494 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 WHAMMP3Q1A5X7 153 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 SLC9C2Q5TAH2 1124 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 RESP18Q5W5W9 173 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 SYNE3Q6ZMZ3 975 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 BCAS4Q8TDM0 211 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 COG1Q8WTW3 980 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 POLD4Q9HCU8 107 aa10.43□□□□□ -0.74
HMGCLL1-201ENST00000274901 USP54Q70EL1 1684 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 A0A1B0GTH6 734 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 SRGAP2O75044 1071 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 ERVK-24P63145 666 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 SATB1Q01826 763 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 STIM1Q13586 685 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 ANKRD24Q8TF21 1146 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 ZKSCAN4Q969J2 545 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 MMS19Q96T76 1030 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 TFR2Q9UP52 801 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 MRC1P22897 1456 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 ENC1O14682 589 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 EIF3HO15372 352 aaKnown RBP eCLIP10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 MYO1BO43795 1136 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 ATP5JP18859 108 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 FXR1P51114 621 aaKnown RBP eCLIP10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 ATP2B2Q01814 1243 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 GRIN1Q05586 938 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 BRAPQ7Z569 592 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 CTCFLQ8NI51 663 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 FAM76AQ8TAV0 307 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 MAP3K14Q99558 947 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 FAM107BQ9H098 131 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 ACBD3Q9H3P7 528 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 MCM8Q9UJA3 840 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 MYO6Q9UM54 1294 aa10.42□□□□□ -0.74
HMGCLL1-201ENST00000274901 FAM237AA0A1B0GTK4 181 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 GRM8O00222 908 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 C21orf2O43822 256 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 HMGB1P09429 215 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 IBSPP21815 317 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 CDC25AP30304 524 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 CASP14P31944 242 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 PBX1P40424 430 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 GNGT1P63211 74 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 DBNDD2Q9BQY9 259 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 GNL3LQ9NVN8 582 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 TRPM3Q9HCF6 1732 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 GOLGA6CA6NDK9 693 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 MFAP3LO75121 409 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 GYPCP04921 128 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 GOLGA6DP0CG33 693 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 PIP4K2BP78356 416 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 TFCP2Q12800 502 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 PPP2R5AQ15172 486 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 CHRNA2Q15822 529 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 MAP9Q49MG5 647 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 RRP36Q96EU6 259 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 FAXDC2Q96IV6 333 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 SELENOOQ9BVL4 669 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 GOLGA6AQ9NYA3 693 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 KCNH3Q9ULD8 1083 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 RGPD2P0DJD1 1756 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 STRCQ7RTU9 1775 aa10.41□□□□□ -0.74
HMGCLL1-201ENST00000274901 UBE2Q2LH0YL09 131 aa10.4□□□□□ -0.74
HMGCLL1-201ENST00000274901 GBP6Q6ZN66 633 aa10.4□□□□□ -0.74
HMGCLL1-201ENST00000274901 NKX2-3Q8TAU0 364 aa10.4□□□□□ -0.74
HMGCLL1-201ENST00000274901 ENOX1Q8TC92 643 aaKnown RBP10.4□□□□□ -0.74
HMGCLL1-201ENST00000274901 CAPS2Q9BXY5 557 aa10.4□□□□□ -0.74
HMGCLL1-201ENST00000274901 REXO2Q9Y3B8 237 aaKnown RBP10.4□□□□□ -0.74
HMGCLL1-201ENST00000274901 CEMIPQ8WUJ3 1361 aa10.4□□□□□ -0.74
HMGCLL1-201ENST00000274901 COBLO75128 1261 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 HSPD1P10809 573 aaKnown RBP10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 PAX7P23759 505 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 TUBB2AQ13885 445 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 TNNI3KQ59H18 835 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms