RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 PTGS1P23219 599 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 ZAP70P43403 619 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 PIP4K2AP48426 406 aaPredicted RBP11.66□□□□□ -0.54
CPNE9-201ENST00000273027 NLRP12P59046 1061 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 MAP2K1Q02750 393 aaPredicted RBP11.66□□□□□ -0.54
CPNE9-201ENST00000273027 TRIM29Q14134 588 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 SLC39A14Q15043 492 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 CT47A1Q5JQC4 288 aaPredicted RBP11.66□□□□□ -0.54
CPNE9-201ENST00000273027 ANO1Q5XXA6 986 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 NLRP10Q86W26 655 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 SPC24Q8NBT2 197 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 CCDC34Q96HJ3 373 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 ZNF594Q96JF6 807 aaPredicted RBP11.66□□□□□ -0.54
CPNE9-201ENST00000273027 ZNF830Q96NB3 372 aaPredicted RBP11.66□□□□□ -0.54
CPNE9-201ENST00000273027 CCDC94Q9BW85 323 aaPredicted RBP11.66□□□□□ -0.54
CPNE9-201ENST00000273027 PUS3Q9BZE2 481 aaKnown RBP11.66□□□□□ -0.54
CPNE9-201ENST00000273027 KRT23Q9C075 422 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 OSBPL5Q9H0X9 879 aaPredicted RBP11.66□□□□□ -0.54
CPNE9-201ENST00000273027 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.66□□□□□ -0.54
CPNE9-201ENST00000273027 CNNM1Q9NRU3 951 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 RIC1Q4ADV7 1423 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 DICER1Q9UPY3 1922 aaKnown RBP11.65□□□□□ -0.54
CPNE9-201ENST00000273027 PATL2C9JE40 543 aaKnown RBP11.65□□□□□ -0.54
CPNE9-201ENST00000273027 NPHP1O15259 732 aa11.65□□□□□ -0.54
CPNE9-201ENST00000273027 SLC3A2P08195 630 aaKnown RBP11.65□□□□□ -0.54
CPNE9-201ENST00000273027 SLC5A1P13866 664 aa11.65□□□□□ -0.54
CPNE9-201ENST00000273027 ITGA6P23229 1130 aa11.65□□□□□ -0.54
CPNE9-201ENST00000273027 MAP3K12Q12852 859 aa11.65□□□□□ -0.54
CPNE9-201ENST00000273027 SART3Q15020 963 aaKnown RBP11.65□□□□□ -0.54
CPNE9-201ENST00000273027 PUM3Q15397 648 aaKnown RBP11.65□□□□□ -0.54
CPNE9-201ENST00000273027 TBC1D9BQ66K14 1250 aa11.65□□□□□ -0.54
CPNE9-201ENST00000273027 SMAP1Q8IYB5 467 aaPredicted RBP11.65□□□□□ -0.54
CPNE9-201ENST00000273027 FEZ1Q99689 392 aa11.65□□□□□ -0.54
CPNE9-201ENST00000273027 LRRC2Q9BYS8 371 aa11.65□□□□□ -0.54
CPNE9-201ENST00000273027 ABT1Q9ULW3 272 aaKnown RBP11.65□□□□□ -0.54
CPNE9-201ENST00000273027 NAP1L2Q9ULW6 460 aaPredicted RBP11.65□□□□□ -0.54
CPNE9-201ENST00000273027 PYCARDQ9ULZ3 195 aa11.65□□□□□ -0.54
CPNE9-201ENST00000273027 LTBP3Q9NS15 1303 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 ANKRD31Q8N7Z5 1873 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 RASSF10A6NK89 507 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 SH2B2O14492 632 aaPredicted RBP11.64□□□□□ -0.55
CPNE9-201ENST00000273027 CUTAO60888 179 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 PCP11498 1178 aaKnown RBP11.64□□□□□ -0.55
CPNE9-201ENST00000273027 U2AF2P26368 475 aaKnown RBP eCLIP11.64□□□□□ -0.55
CPNE9-201ENST00000273027 METAP2P50579 478 aaKnown RBP eCLIP11.64□□□□□ -0.55
CPNE9-201ENST00000273027 KIF23Q02241 960 aaPredicted RBP11.64□□□□□ -0.55
CPNE9-201ENST00000273027 COL9A3Q14050 684 aaPredicted RBP11.64□□□□□ -0.55
CPNE9-201ENST00000273027 PARP10Q53GL7 1025 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 MAP1SQ66K74 1059 aaPredicted RBP11.64□□□□□ -0.55
CPNE9-201ENST00000273027 KANK3Q6NY19 840 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 VGLL2Q8N8G2 317 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 CCDC112Q8NEF3 446 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 CNKSR1Q969H4 720 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 L3MBTL3Q96JM7 780 aaPredicted RBP11.64□□□□□ -0.55
CPNE9-201ENST00000273027 NACAP1Q9BZK3 213 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 RNF41Q9H4P4 317 aaPredicted RBP11.64□□□□□ -0.55
CPNE9-201ENST00000273027 HACL1Q9UJ83 578 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 HPS5Q9UPZ3 1129 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 ZNF330Q9Y3S2 320 aaPredicted RBP11.64□□□□□ -0.55
CPNE9-201ENST00000273027 NDUFB9Q9Y6M9 179 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
CPNE9-201ENST00000273027 IRS4O14654 1257 aaPredicted RBP11.63□□□□□ -0.55
CPNE9-201ENST00000273027 ZBTB22O15209 634 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 FOXP2O15409 715 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 ZNF202O95125 648 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 TNNT1P13805 278 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 EPHX2P34913 555 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 MCAMP43121 646 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 RGS19P49795 217 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 ANTXR2P58335 489 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 GRM1Q13255 1194 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 SAFBQ15424 915 aaKnown RBP eCLIP11.63□□□□□ -0.55
CPNE9-201ENST00000273027 TPRNQ4KMQ1 711 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 SLC9C2Q5TAH2 1124 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 PRR5LQ6MZQ0 368 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
CPNE9-201ENST00000273027 DHX40Q8IX18 779 aaKnown RBP11.63□□□□□ -0.55
CPNE9-201ENST00000273027 ANKRD7Q92527 254 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 BEGAINQ9BUH8 593 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 PUS7LQ9H0K6 701 aaKnown RBP11.63□□□□□ -0.55
CPNE9-201ENST00000273027 GOLPH3LQ9H4A5 285 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 NCOA5Q9HCD5 579 aaKnown RBP11.63□□□□□ -0.55
CPNE9-201ENST00000273027 DACH1Q9UI36 760 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 TUBE1Q9UJT0 475 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 CEP131Q9UPN4 1083 aa11.63□□□□□ -0.55
CPNE9-201ENST00000273027 FER1L6Q2WGJ9 1857 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 ZBTB43O43298 467 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 FGFR2P21802 821 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 IARSP41252 1262 aaKnown RBP11.62□□□□□ -0.55
CPNE9-201ENST00000273027 EIF5P55010 431 aaKnown RBP11.62□□□□□ -0.55
CPNE9-201ENST00000273027 RBM10P98175 930 aaKnown RBP11.62□□□□□ -0.55
CPNE9-201ENST00000273027 CEBPZQ03701 1054 aaKnown RBP11.62□□□□□ -0.55
CPNE9-201ENST00000273027 GNL2Q13823 731 aaKnown RBP11.62□□□□□ -0.55
CPNE9-201ENST00000273027 PTPN14Q15678 1187 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 TPD52L1Q16890 204 aaPredicted RBP11.62□□□□□ -0.55
CPNE9-201ENST00000273027 SOGA3Q5TF21 947 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 STYK1Q6J9G0 422 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 APOA5Q6Q788 366 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 C11orf57Q6ZUT1 292 aaPredicted RBP11.62□□□□□ -0.55
CPNE9-201ENST00000273027 FCHSD1Q86WN1 690 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms