RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 USP17L3A6NCW0 530 aa16.25■□□□□ 0.19
TNFRSF11A-201ENST00000269485 USP17L4A6NCW7 530 aa16.25■□□□□ 0.19
TNFRSF11A-201ENST00000269485 KRT40Q6A162 431 aa16.25■□□□□ 0.19
TNFRSF11A-201ENST00000269485 USP17L1Q7RTZ2 530 aa16.25■□□□□ 0.19
TNFRSF11A-201ENST00000269485 ZNF444Q8N0Y2 327 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF11A-201ENST00000269485 PGBD1Q96JS3 809 aa16.25■□□□□ 0.19
TNFRSF11A-201ENST00000269485 STRCQ7RTU9 1775 aa16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 PHRF1Q9P1Y6 1649 aaKnown RBP16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 NLRP5P59047 1200 aa16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 NCBP1Q09161 790 aaKnown RBP16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 HEATR3Q7Z4Q2 680 aa16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 KRT222Q8N1A0 295 aa16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 DSCC1Q9BVC3 393 aa16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 VIRMAQ69YN4 1812 aaKnown RBP16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 MROH5Q6ZUA9 1318 aa16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 MCM7P33993 719 aa16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 AMOTL1Q8IY63 956 aa16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 ZNF526Q8TF50 670 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 UBA5Q9GZZ9 404 aa16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 LRRC4BQ9NT99 713 aa16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 KDM3BQ7LBC6 1761 aa16.24■□□□□ 0.19
TNFRSF11A-201ENST00000269485 HMGB1P09429 215 aaKnown RBP16.23■□□□□ 0.19
TNFRSF11A-201ENST00000269485 TRMT44Q8IYL2 757 aaKnown RBP16.23■□□□□ 0.19
TNFRSF11A-201ENST00000269485 LDHBP07195 334 aaKnown RBP16.23■□□□□ 0.19
TNFRSF11A-201ENST00000269485 SLFN14P0C7P3 912 aa16.23■□□□□ 0.19
TNFRSF11A-201ENST00000269485 ARID5BQ14865 1188 aa16.23■□□□□ 0.19
TNFRSF11A-201ENST00000269485 FEZ1Q99689 392 aa16.23■□□□□ 0.19
TNFRSF11A-201ENST00000269485 SERPINC1P01008 464 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 HNRNPH2P55795 449 aaKnown RBP16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 MFSD14BQ5SR56 506 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 DIS3L2Q8IYB7 885 aaKnown RBP16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 DHX58Q96C10 678 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 STRBPQ96SI9 672 aaKnown RBP16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 THRAP3Q9Y2W1 955 aaKnown RBP16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 TNKSO95271 1327 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 SPTLC2O15270 562 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 TSPY3P0CV98 308 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 TSPY8P0CW00 308 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 CTCFLQ8NI51 663 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 CTDNEP1O95476 244 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 SNAP25P60880 206 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 TFAP4Q01664 338 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 PPARAQ07869 468 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 TERF2Q15554 542 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 GRIK5Q16478 980 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 GPCPD1Q9NPB8 672 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 GPR108Q9NPR9 543 aa16.22■□□□□ 0.19
TNFRSF11A-201ENST00000269485 ABCC12Q96J65 1359 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 CACNA1FO60840 1977 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 MECOMQ03112 1051 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 CCDC96Q2M329 555 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 EPB41L4AQ9HCS5 686 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 POLD4Q9HCU8 107 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 KIF28PB7ZC32 967 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 PLEKHA8P1O95397 391 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 NDUFA8P51970 172 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 AKNAD1Q5T1N1 836 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 CNNM3Q8NE01 707 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 OXER1Q8TDS5 423 aa16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 ZC3H12CQ9C0D7 883 aaKnown RBP16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 FRMPD2Q68DX3 1309 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF11A-201ENST00000269485 SERPINB2P05120 415 aa16.21■□□□□ 0.18
TNFRSF11A-201ENST00000269485 ANTXR2P58335 489 aa16.21■□□□□ 0.18
TNFRSF11A-201ENST00000269485 VPS72Q15906 364 aa16.21■□□□□ 0.18
TNFRSF11A-201ENST00000269485 TEX35Q5T0J7 233 aa16.21■□□□□ 0.18
TNFRSF11A-201ENST00000269485 APOA5Q6Q788 366 aa16.21■□□□□ 0.18
TNFRSF11A-201ENST00000269485 CATIPQ7Z7H3 387 aa16.21■□□□□ 0.18
TNFRSF11A-201ENST00000269485 TNS2Q63HR2 1409 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 ANKRD65E5RJM6 399 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 PRKG1Q13976 671 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 RGS22Q8NE09 1264 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 FAM84BQ96KN1 310 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 VWA3AA6NCI4 1184 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 RAD51AP2Q09MP3 1159 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 ENOX2Q16206 610 aaKnown RBP16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 SMYD4Q8IYR2 804 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 LRRC47Q8N1G4 583 aaKnown RBP16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 ESR2Q92731 530 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 ZNF804BA4D1E1 1349 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 TRIM66O15016 1216 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 RPS6KA4O75676 772 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 PRR29P0C7W0 189 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 PNOCQ13519 176 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 ELF2Q15723 593 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 CFAP100Q494V2 611 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 NOM1Q5C9Z4 860 aaKnown RBP16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 PIK3AP1Q6ZUJ8 805 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 FNBP4Q8N3X1 1017 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 CRACR2BQ8N4Y2 399 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 PCDHA7Q9UN72 937 aa16.2■□□□□ 0.18
TNFRSF11A-201ENST00000269485 SLC3A2P08195 630 aaKnown RBP16.19■□□□□ 0.18
TNFRSF11A-201ENST00000269485 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
TNFRSF11A-201ENST00000269485 TEX11Q8IYF3 940 aa16.19■□□□□ 0.18
TNFRSF11A-201ENST00000269485 CERKQ8TCT0 537 aa16.19■□□□□ 0.18
TNFRSF11A-201ENST00000269485 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
TNFRSF11A-201ENST00000269485 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
TNFRSF11A-201ENST00000269485 SCN11AQ9UI33 1791 aa16.19■□□□□ 0.18
TNFRSF11A-201ENST00000269485 FOXN1O15353 648 aa16.18■□□□□ 0.18
TNFRSF11A-201ENST00000269485 AP5Z1O43299 807 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms