RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TMEM87BQ96K49 555 aa19.37■□□□□ 0.69
RTN1-201ENST00000267484 AKAP11Q9UKA4 1901 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 TCRBV5S4A2TA0A5A2 114 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 ANKRD18BA2A2Z9 1011 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 ZRANB2O95218 330 aaKnown RBP eCLIP19.36■□□□□ 0.69
RTN1-201ENST00000267484 STX17P56962 302 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 CCDC34Q96HJ3 373 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 TBC1D2BQ9UPU7 963 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 KAT6BQ8WYB5 2073 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 ADAMTSL3P82987 1691 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 ZSCAN12O43309 604 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 SASH3O75995 380 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 CASQ1P31415 396 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 UBE3CQ15386 1083 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 VGLL2Q8N8G2 317 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 FBXO2Q9UK22 296 aaPredicted RBP19.36■□□□□ 0.69
RTN1-201ENST00000267484 TNS3Q68CZ2 1445 aa19.36■□□□□ 0.69
RTN1-201ENST00000267484 SPATA31A3Q5VYP0 1347 aa19.35■□□□□ 0.69
RTN1-201ENST00000267484 WDR17Q8IZU2 1322 aa19.35■□□□□ 0.69
RTN1-201ENST00000267484 IRS4O14654 1257 aaPredicted RBP19.35■□□□□ 0.69
RTN1-201ENST00000267484 CTSWP56202 376 aa19.35■□□□□ 0.69
RTN1-201ENST00000267484 NLRP10Q86W26 655 aa19.35■□□□□ 0.69
RTN1-201ENST00000267484 TMOD3Q9NYL9 352 aa19.35■□□□□ 0.69
RTN1-201ENST00000267484 PDE8BO95263 885 aa19.35■□□□□ 0.69
RTN1-201ENST00000267484 MMP1P03956 469 aa19.35■□□□□ 0.69
RTN1-201ENST00000267484 TBX2Q13207 712 aaPredicted RBP19.35■□□□□ 0.69
RTN1-201ENST00000267484 TRMT112Q9UI30 125 aaKnown RBP19.35■□□□□ 0.69
RTN1-201ENST00000267484 FBXO3Q9UK99 471 aa19.35■□□□□ 0.69
RTN1-201ENST00000267484 TEX33O43247 280 aa19.35■□□□□ 0.69
RTN1-201ENST00000267484 TRERF1Q96PN7 1200 aa19.35■□□□□ 0.69
RTN1-201ENST00000267484 MRPL44Q9H9J2 332 aaKnown RBP19.35■□□□□ 0.69
RTN1-201ENST00000267484 DDX60Q8IY21 1712 aaKnown RBP19.34■□□□□ 0.69
RTN1-201ENST00000267484 MYH7P12883 1935 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 FMNL1O95466 1100 aaPredicted RBP19.34■□□□□ 0.69
RTN1-201ENST00000267484 IL2RBP14784 551 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 AFMP43652 599 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 SPECC1LQ69YQ0 1117 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 SGMS1Q86VZ5 419 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 MIGA1Q8NAN2 632 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 SMARCE1Q969G3 411 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 ARGLU1Q9NWB6 273 aaPredicted RBP19.34■□□□□ 0.69
RTN1-201ENST00000267484 SOWAHDA6NJG2 315 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 TTF1Q15361 905 aaPredicted RBP19.34■□□□□ 0.69
RTN1-201ENST00000267484 SMYD4Q8IYR2 804 aaPredicted RBP19.34■□□□□ 0.69
RTN1-201ENST00000267484 DHX58Q96C10 678 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 PLA2G12BQ9BX93 195 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 TEX13AQ9BXU3 409 aaPredicted RBP19.34■□□□□ 0.69
RTN1-201ENST00000267484 CABP5Q9NP86 173 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 LZTFL1Q9NQ48 299 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 EFCAB8A8MWE9 144 aa19.34■□□□□ 0.69
RTN1-201ENST00000267484 ZNF18P17022 549 aa19.33■□□□□ 0.69
RTN1-201ENST00000267484 PPP2R3AQ06190 1150 aa19.33■□□□□ 0.69
RTN1-201ENST00000267484 TRIM28Q13263 835 aaKnown RBP19.33■□□□□ 0.69
RTN1-201ENST00000267484 DHX8Q14562 1220 aaKnown RBP19.33■□□□□ 0.69
RTN1-201ENST00000267484 SAFBQ15424 915 aaKnown RBP eCLIP19.33■□□□□ 0.69
RTN1-201ENST00000267484 CSRNP2Q9H175 543 aa19.33■□□□□ 0.69
RTN1-201ENST00000267484 PTPREP23469 700 aa19.33■□□□□ 0.68
RTN1-201ENST00000267484 GIGYF2Q6Y7W6 1299 aaKnown RBP19.33■□□□□ 0.68
RTN1-201ENST00000267484 TFRCP02786 760 aaKnown RBP19.32■□□□□ 0.68
RTN1-201ENST00000267484 TUBB4AP04350 444 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 RASGRF1Q13972 1273 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 RTN1Q16799 776 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 PIGBQ92521 554 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 STAMQ92783 540 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 ECM29Q5VYK3 1845 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 PATL2C9JE40 543 aaKnown RBP19.32■□□□□ 0.68
RTN1-201ENST00000267484 MFSD6Q6ZSS7 791 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 LCORLQ8N3X6 602 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 IQSEC3Q9UPP2 1182 aaPredicted RBP19.32■□□□□ 0.68
RTN1-201ENST00000267484 ZNF142P52746 1687 aaPredicted RBP19.32■□□□□ 0.68
RTN1-201ENST00000267484 A0A087X0B3 334 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 GSG1L2A8MUP6 293 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 IFNAR1P17181 557 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 TDO2P48775 406 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 GYS2P54840 703 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 MORC3Q14149 939 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 EPSTI1Q96J88 318 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 MAP3K15Q6ZN16 1313 aa19.32■□□□□ 0.68
RTN1-201ENST00000267484 TBC1D8O95759 1140 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 MAP3K9P80192 1104 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 AKNAD1Q5T1N1 836 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 SPATA5Q8NB90 893 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 NEK11Q8NG66 645 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 CCDC12Q8WUD4 166 aaPredicted RBP19.31■□□□□ 0.68
RTN1-201ENST00000267484 KIFC2Q96AC6 838 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 RAI14Q9P0K7 980 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 LIFRP42702 1097 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 SHISA4Q96DD7 197 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 MRFAP1Q9Y605 127 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 ABCC12Q96J65 1359 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 PRDM1O75626 825 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 ST5P78524 1137 aa19.31■□□□□ 0.68
RTN1-201ENST00000267484 NKX1-1Q15270 411 aaPredicted RBP19.31■□□□□ 0.68
RTN1-201ENST00000267484 EARS2Q5JPH6 523 aaKnown RBP19.31■□□□□ 0.68
RTN1-201ENST00000267484 SRRTQ9BXP5 876 aaKnown RBP19.31■□□□□ 0.68
RTN1-201ENST00000267484 ACTN4O43707 911 aaKnown RBP19.3■□□□□ 0.68
RTN1-201ENST00000267484 STX10O60499 249 aa19.3■□□□□ 0.68
RTN1-201ENST00000267484 SARSP49591 514 aaKnown RBP19.3■□□□□ 0.68
RTN1-201ENST00000267484 WTAPQ15007 396 aa19.3■□□□□ 0.68
RTN1-201ENST00000267484 CC2D1AQ6P1N0 951 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms