RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 TMEM51Q9NW97 253 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 NID2Q14112 1375 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 ARAP2Q8WZ64 1704 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 MINDY4BA8MYZ0 360 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 DEXIO95424 95 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 MMP1P03956 469 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 TNNT1P13805 278 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 UBE4AQ14139 1066 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 DIS3L2Q8IYB7 885 aaKnown RBP11.88□□□□□ -0.51
LSG1-201ENST00000265245 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
LSG1-201ENST00000265245 TACC3Q9Y6A5 838 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 C4AP0C0L4 1744 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 C4BP0C0L5 1744 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 RIOK3O14730 519 aaKnown RBP11.87□□□□□ -0.51
LSG1-201ENST00000265245 RESP18Q5W5W9 173 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
LSG1-201ENST00000265245 IMPACTQ9P2X3 320 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 ZNF804BA4D1E1 1349 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 FAM237AA0A1B0GTK4 181 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 BTBD18B2RXH4 712 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 GYG1P46976 350 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 ZNF654Q8IZM8 581 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 CCDC82Q8N4S0 544 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 SPATA31A5Q5VU36 1347 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 SPATA31A7Q8IWB4 1347 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 UBE2Q2LH0YL09 131 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 AKAP17AQ02040 695 aaKnown RBP11.87□□□□□ -0.51
LSG1-201ENST00000265245 DHX8Q14562 1220 aaKnown RBP11.87□□□□□ -0.51
LSG1-201ENST00000265245 RILPL1Q5EBL4 403 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 FANCBQ8NB91 859 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 SDR42E1Q8WUS8 393 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 CLIC6Q96NY7 704 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 FOXP1Q9H334 677 aaPredicted RBP11.87□□□□□ -0.51
LSG1-201ENST00000265245 HOOK1Q9UJC3 728 aaKnown RBP11.87□□□□□ -0.51
LSG1-201ENST00000265245 KCNH3Q9ULD8 1083 aa11.87□□□□□ -0.51
LSG1-201ENST00000265245 IKBKBO14920 756 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 NRDCO43847 1150 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 ARID5BQ14865 1188 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 PPP2R5BQ15173 497 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
LSG1-201ENST00000265245 ERFEQ4G0M1 354 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 CNPY4Q8N129 248 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 CRACR2BQ8N4Y2 399 aaPredicted RBP11.86□□□□□ -0.51
LSG1-201ENST00000265245 CNNM3Q8NE01 707 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 BSDC1Q9NW68 430 aaPredicted RBP11.86□□□□□ -0.51
LSG1-201ENST00000265245 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 TUBE1Q9UJT0 475 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 NUTM2BA6NNL0 878 aaPredicted RBP11.86□□□□□ -0.51
LSG1-201ENST00000265245 NUTM2EB1AL46 878 aaPredicted RBP11.86□□□□□ -0.51
LSG1-201ENST00000265245 GUCY1A2P33402 732 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 BARGINQ6ZT62 677 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 NUTM2AQ8IVF1 878 aaPredicted RBP11.86□□□□□ -0.51
LSG1-201ENST00000265245 TSC1Q92574 1164 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 KCNJ14Q9UNX9 436 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 PAXBP1Q9Y5B6 917 aa11.86□□□□□ -0.51
LSG1-201ENST00000265245 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
LSG1-201ENST00000265245 XBP1P17861 261 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 OLFM4Q6UX06 510 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 XPO4Q9C0E2 1151 aaKnown RBP11.85□□□□□ -0.51
LSG1-201ENST00000265245 OSBPL5Q9H0X9 879 aaPredicted RBP11.85□□□□□ -0.51
LSG1-201ENST00000265245 ANAPC4Q9UJX5 808 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 TNKSO95271 1327 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 TIAM2Q8IVF5 1701 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 ISM2Q6H9L7 571 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 ADGRA1Q86SQ6 560 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 CCDC150Q8NCX0 1101 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
LSG1-201ENST00000265245 KCNQ2O43526 872 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 PNOCQ13519 176 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 KRBA2Q6ZNG9 492 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 CEP131Q9UPN4 1083 aa11.85□□□□□ -0.51
LSG1-201ENST00000265245 BRD2P25440 801 aaKnown RBP11.84□□□□□ -0.51
LSG1-201ENST00000265245 LMOD1P29536 600 aaPredicted RBP11.84□□□□□ -0.51
LSG1-201ENST00000265245 MYL5Q02045 173 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 NCAPHQ15003 741 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 SAMD1Q6SPF0 538 aaPredicted RBP11.84□□□□□ -0.51
LSG1-201ENST00000265245 SFPQP23246 707 aaKnown RBP eCLIP11.84□□□□□ -0.51
LSG1-201ENST00000265245 CCZ1BP86790 482 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 CCZ1P86791 482 aaPredicted RBP11.84□□□□□ -0.51
LSG1-201ENST00000265245 BICDL1Q6ZP65 573 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 TMC6Q7Z403 805 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 IQCA1Q86XH1 822 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 CMTR1Q8N1G2 835 aaKnown RBP11.84□□□□□ -0.51
LSG1-201ENST00000265245 RIOK1Q9BRS2 568 aaKnown RBP11.84□□□□□ -0.51
LSG1-201ENST00000265245 RNF26Q9BY78 433 aaPredicted RBP11.84□□□□□ -0.51
LSG1-201ENST00000265245 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 MINPP1Q9UNW1 487 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 DOCK2Q92608 1830 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 PTPN14Q15678 1187 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 LONRF3Q496Y0 759 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 CATIPQ7Z7H3 387 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 CCDC112Q8NEF3 446 aa11.84□□□□□ -0.51
LSG1-201ENST00000265245 PCP11498 1178 aaKnown RBP11.83□□□□□ -0.52
LSG1-201ENST00000265245 CEP135Q66GS9 1140 aa11.83□□□□□ -0.52
LSG1-201ENST00000265245 C3orf67Q6ZVT6 689 aa11.83□□□□□ -0.52
LSG1-201ENST00000265245 BRIP1Q9BX63 1249 aa11.83□□□□□ -0.52
LSG1-201ENST00000265245 PTPREP23469 700 aa11.83□□□□□ -0.52
LSG1-201ENST00000265245 TOB1P50616 345 aaPredicted RBP11.83□□□□□ -0.52
LSG1-201ENST00000265245 FANCCQ00597 558 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms