RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 FKBP1BP68106 108 aa8.71□□□□□ -1.01
DEPDC1B-201ENST00000265036 DCAF15Q66K64 600 aa8.71□□□□□ -1.01
DEPDC1B-201ENST00000265036 CWC27Q6UX04 472 aaKnown RBP8.71□□□□□ -1.01
DEPDC1B-201ENST00000265036 ZNF589Q86UQ0 364 aaPredicted RBP8.71□□□□□ -1.01
DEPDC1B-201ENST00000265036 ZNF341Q9BYN7 854 aa8.71□□□□□ -1.01
DEPDC1B-201ENST00000265036 IL25Q9H293 177 aa8.71□□□□□ -1.01
DEPDC1B-201ENST00000265036 OSBPL3Q9H4L5 887 aa8.71□□□□□ -1.01
DEPDC1B-201ENST00000265036 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.71□□□□□ -1.01
DEPDC1B-201ENST00000265036 EPB41L4AQ9HCS5 686 aaPredicted RBP8.71□□□□□ -1.01
DEPDC1B-201ENST00000265036 CSADQ9Y600 493 aa8.71□□□□□ -1.01
DEPDC1B-201ENST00000265036 SNCAIPQ9Y6H5 919 aa8.71□□□□□ -1.01
DEPDC1B-201ENST00000265036 POLR3DP05423 398 aaPredicted RBP8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 SLC10A3P09131 477 aa8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 SDSP20132 328 aa8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 RRP1BQ14684 758 aaKnown RBP8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 ZMYM1Q5SVZ6 1142 aa8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 LDLRAD1Q5T700 205 aa8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 ANKRD13AQ8IZ07 590 aa8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 OPTNQ96CV9 577 aa8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 SLC10A4Q96EP9 437 aa8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 DYNLL2Q96FJ2 89 aa8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 STRBPQ96SI9 672 aaKnown RBP8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 TRIM34Q9BYJ4 488 aa8.71□□□□□ -1.02
DEPDC1B-201ENST00000265036 LAMB1P07942 1786 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 ZFYP08048 801 aaPredicted RBP8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 ECE1P42892 770 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 DIAPH3Q9NSV4 1193 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 PPP4R2Q9NY27 417 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 THSD7BQ9C0I4 1608 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 GSG1L2A8MUP6 293 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 USP17L12C9JPN9 530 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 USP17L21D6R901 530 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 HLA-DOAP06340 250 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 TDO2P48775 406 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 MAP3K9P80192 1104 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 KIF23Q02241 960 aaPredicted RBP8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 MAP3K11Q16584 847 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 PI4KBQ9UBF8 816 aa8.7□□□□□ -1.02
DEPDC1B-201ENST00000265036 PTPRFP10586 1907 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 MINDY4BA8MYZ0 360 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 JAG1P78504 1218 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 NOGQ13253 232 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 DGKZQ13574 1117 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 CLEC10AQ8IUN9 316 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 WNK4Q96J92 1243 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 SERPINB13Q9UIV8 391 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 COL2A1P02458 1487 aaPredicted RBP8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 PHF20L1A8MW92 1017 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 IRF6O14896 467 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 FOXP2O15409 715 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 LRRFIP1Q32MZ4 808 aaKnown RBP8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 SPRYD7Q5W111 196 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 HOOK2Q96ED9 719 aa8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 DHX36Q9H2U1 1008 aaKnown RBP8.69□□□□□ -1.02
DEPDC1B-201ENST00000265036 PHIPQ8WWQ0 1821 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 TRIM75PA6NK02 468 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 NPM3O75607 178 aaKnown RBP8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 PRDM1O75626 825 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 HSPA1AP0DMV8 641 aaKnown RBP8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 HSPA1BP0DMV9 641 aaKnown RBP8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 CERS3Q8IU89 383 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 CCDC102AQ96A19 550 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 DDRGK1Q96HY6 314 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 HHIPL1Q96JK4 782 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 CASP8AP2Q9UKL3 1982 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 HAND2P61296 217 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 CTR9Q6PD62 1173 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 SCYL3Q8IZE3 742 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 NAPBQ9H115 298 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 PICK1Q9NRD5 415 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 ATP8A2Q9NTI2 1148 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 ZHX2Q9Y6X8 837 aa8.68□□□□□ -1.02
DEPDC1B-201ENST00000265036 CCDC171Q6TFL3 1326 aa8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 SPDYE5A6NIY4 337 aa8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 MPHOSPH10O00566 681 aaKnown RBP8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 IGSF3O75054 1194 aa8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 ECM2O94769 699 aaPredicted RBP8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 GH2P01242 217 aa8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 SHMT1P34896 483 aa8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 RAB3GAP1Q15042 981 aa8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 ZYXQ15942 572 aaKnown RBP8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 MCMDC2Q4G0Z9 681 aa8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 TMED8Q6PL24 325 aaPredicted RBP8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 TTC6Q86TZ1 520 aa8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 IFNL3Q8IZI9 196 aa8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 HERC5Q9UII4 1024 aaKnown RBP8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 ZNF112Q9UJU3 913 aa8.67□□□□□ -1.02
DEPDC1B-201ENST00000265036 TRPA1O75762 1119 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 AMOTL1Q8IY63 956 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 JMYQ8N9B5 988 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 INCENPQ9NQS7 918 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 CCL15-CCL14A0A0B4J2E2 113 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 IGF2BP3O00425 579 aaKnown RBP eCLIP8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 PTPRAP18433 802 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 CAP2P40123 477 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 CTDSPL2Q05D32 466 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 CCL15Q16663 113 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 C12orf60Q5U649 245 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 ERO1BQ86YB8 467 aa8.66□□□□□ -1.02
DEPDC1B-201ENST00000265036 HELLSQ9NRZ9 838 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms