RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ARHGEF6Q15052 776 aa19.56■□□□□ 0.72
USE1-201ENST00000263897 GPAT2Q6NUI2 795 aa19.56■□□□□ 0.72
USE1-201ENST00000263897 FASTKD5Q7L8L6 764 aaKnown RBP19.56■□□□□ 0.72
USE1-201ENST00000263897 CERS3Q8IU89 383 aa19.56■□□□□ 0.72
USE1-201ENST00000263897 MIGA1Q8NAN2 632 aa19.56■□□□□ 0.72
USE1-201ENST00000263897 PTPN22Q9Y2R2 807 aa19.56■□□□□ 0.72
USE1-201ENST00000263897 CDK5RAP2Q96SN8 1893 aa19.56■□□□□ 0.72
USE1-201ENST00000263897 FLT1P17948 1338 aa19.55■□□□□ 0.72
USE1-201ENST00000263897 A0A0G2JLL6 359 aaPredicted RBP19.55■□□□□ 0.72
USE1-201ENST00000263897 CAP2P40123 477 aa19.55■□□□□ 0.72
USE1-201ENST00000263897 C17orf99Q6UX52 265 aa19.55■□□□□ 0.72
USE1-201ENST00000263897 PRRT2Q7Z6L0 340 aaPredicted RBP19.55■□□□□ 0.72
USE1-201ENST00000263897 METTL16Q86W50 562 aaKnown RBP19.55■□□□□ 0.72
USE1-201ENST00000263897 PALD1Q9ULE6 856 aa19.55■□□□□ 0.72
USE1-201ENST00000263897 DOCK1Q14185 1865 aa19.54■□□□□ 0.72
USE1-201ENST00000263897 MLLT1Q03111 559 aaPredicted RBP19.54■□□□□ 0.72
USE1-201ENST00000263897 RRP1BQ14684 758 aaKnown RBP19.54■□□□□ 0.72
USE1-201ENST00000263897 LRRCC1Q9C099 1032 aa19.54■□□□□ 0.72
USE1-201ENST00000263897 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.54■□□□□ 0.72
USE1-201ENST00000263897 FOCADQ5VW36 1801 aa19.53■□□□□ 0.72
USE1-201ENST00000263897 PHIPQ8WWQ0 1821 aa19.53■□□□□ 0.72
USE1-201ENST00000263897 GOLIM4O00461 696 aa19.53■□□□□ 0.72
USE1-201ENST00000263897 ATP5JP18859 108 aa19.53■□□□□ 0.72
USE1-201ENST00000263897 SOX10P56693 466 aa19.53■□□□□ 0.72
USE1-201ENST00000263897 SLC9C2Q5TAH2 1124 aa19.53■□□□□ 0.72
USE1-201ENST00000263897 CCDC84Q86UT8 332 aaPredicted RBP19.53■□□□□ 0.72
USE1-201ENST00000263897 DNAJC2Q99543 621 aaKnown RBP19.53■□□□□ 0.72
USE1-201ENST00000263897 DCTPP1Q9H773 170 aa19.53■□□□□ 0.72
USE1-201ENST00000263897 CPA4Q9UI42 421 aa19.53■□□□□ 0.72
USE1-201ENST00000263897 TRIM75PA6NK02 468 aa19.52■□□□□ 0.72
USE1-201ENST00000263897 USP5P45974 858 aa19.52■□□□□ 0.72
USE1-201ENST00000263897 LACTBP83111 547 aaPredicted RBP19.52■□□□□ 0.72
USE1-201ENST00000263897 KIF22Q14807 665 aa19.52■□□□□ 0.72
USE1-201ENST00000263897 GADL1Q6ZQY3 521 aa19.52■□□□□ 0.72
USE1-201ENST00000263897 BOLA2Q9H3K6 86 aa19.52■□□□□ 0.72
USE1-201ENST00000263897 SAP30BPQ9UHR5 308 aaKnown RBP19.52■□□□□ 0.72
USE1-201ENST00000263897 ADGRA2Q96PE1 1338 aa19.51■□□□□ 0.71
USE1-201ENST00000263897 USP17L5A8MUK1 530 aa19.51■□□□□ 0.71
USE1-201ENST00000263897 SMARCA5O60264 1052 aaPredicted RBP19.51■□□□□ 0.71
USE1-201ENST00000263897 PDE6AP16499 860 aa19.51■□□□□ 0.71
USE1-201ENST00000263897 SPP2Q13103 211 aa19.51■□□□□ 0.71
USE1-201ENST00000263897 CRACR2BQ8N4Y2 399 aaPredicted RBP19.51■□□□□ 0.71
USE1-201ENST00000263897 EDC3Q96F86 508 aaKnown RBP19.51■□□□□ 0.71
USE1-201ENST00000263897 RIOK1Q9BRS2 568 aaKnown RBP19.51■□□□□ 0.71
USE1-201ENST00000263897 TBC1D2Q9BYX2 928 aa19.51■□□□□ 0.71
USE1-201ENST00000263897 DNAJC18Q9H819 358 aa19.51■□□□□ 0.71
USE1-201ENST00000263897 SLC45A1Q9Y2W3 748 aa19.51■□□□□ 0.71
USE1-201ENST00000263897 PTPRFP10586 1907 aa19.51■□□□□ 0.71
USE1-201ENST00000263897 SIPA1L1O43166 1804 aa19.51■□□□□ 0.71
USE1-201ENST00000263897 MAGEB6P1A0A0J9YX57 407 aa19.5■□□□□ 0.71
USE1-201ENST00000263897 HLA-DOAP06340 250 aa19.5■□□□□ 0.71
USE1-201ENST00000263897 CYP2C8P10632 490 aa19.5■□□□□ 0.71
USE1-201ENST00000263897 ZNF280CQ8ND82 737 aa19.5■□□□□ 0.71
USE1-201ENST00000263897 PARK7Q99497 189 aaKnown RBP19.5■□□□□ 0.71
USE1-201ENST00000263897 HAUS7Q99871 368 aa19.5■□□□□ 0.71
USE1-201ENST00000263897 TRIM34Q9BYJ4 488 aa19.5■□□□□ 0.71
USE1-201ENST00000263897 ARHGAP39Q9C0H5 1083 aa19.5■□□□□ 0.71
USE1-201ENST00000263897 PAG1Q9NWQ8 432 aa19.5■□□□□ 0.71
USE1-201ENST00000263897 MYH1P12882 1939 aa19.49■□□□□ 0.71
USE1-201ENST00000263897 TCRBV5S4A2TA0A5A2 114 aa19.49■□□□□ 0.71
USE1-201ENST00000263897 GNRH1P01148 92 aa19.49■□□□□ 0.71
USE1-201ENST00000263897 RRP1P56182 461 aaKnown RBP19.49■□□□□ 0.71
USE1-201ENST00000263897 JAG1P78504 1218 aa19.49■□□□□ 0.71
USE1-201ENST00000263897 ZNF532Q9HCE3 1301 aa19.49■□□□□ 0.71
USE1-201ENST00000263897 ASNSP08243 561 aa19.48■□□□□ 0.71
USE1-201ENST00000263897 BCRP11274 1271 aa19.48■□□□□ 0.71
USE1-201ENST00000263897 SLC4A8Q2Y0W8 1093 aa19.48■□□□□ 0.71
USE1-201ENST00000263897 TTC6Q86TZ1 520 aa19.48■□□□□ 0.71
USE1-201ENST00000263897 PROCA1Q8NCQ7 364 aaPredicted RBP19.48■□□□□ 0.71
USE1-201ENST00000263897 YTHDC1Q96MU7 727 aaKnown RBP19.48■□□□□ 0.71
USE1-201ENST00000263897 WDR18Q9BV38 432 aa19.48■□□□□ 0.71
USE1-201ENST00000263897 AS3MTQ9HBK9 375 aa19.48■□□□□ 0.71
USE1-201ENST00000263897 GINM1Q9NU53 330 aa19.48■□□□□ 0.71
USE1-201ENST00000263897 AGTPBP1Q9UPW5 1226 aa19.48■□□□□ 0.71
USE1-201ENST00000263897 PCDHB15Q9Y5E8 787 aa19.48■□□□□ 0.71
USE1-201ENST00000263897 ATAD5Q96QE3 1844 aa19.48■□□□□ 0.71
USE1-201ENST00000263897 SH3D19Q5HYK7 790 aa19.47■□□□□ 0.71
USE1-201ENST00000263897 CRNKL1Q9BZJ0 848 aaKnown RBP19.47■□□□□ 0.71
USE1-201ENST00000263897 PTCH2Q9Y6C5 1203 aa19.47■□□□□ 0.71
USE1-201ENST00000263897 KIAA0100Q14667 2235 aaKnown RBP19.47■□□□□ 0.71
USE1-201ENST00000263897 CTGFP29279 349 aa19.46■□□□□ 0.71
USE1-201ENST00000263897 PSMC4P43686 418 aa19.46■□□□□ 0.71
USE1-201ENST00000263897 HMGCS2P54868 508 aa19.46■□□□□ 0.71
USE1-201ENST00000263897 TREML2Q5T2D2 321 aa19.46■□□□□ 0.71
USE1-201ENST00000263897 TATDN1Q6P1N9 297 aa19.46■□□□□ 0.71
USE1-201ENST00000263897 ARMC5Q96C12 935 aa19.46■□□□□ 0.71
USE1-201ENST00000263897 EHD4Q9H223 541 aa19.46■□□□□ 0.71
USE1-201ENST00000263897 ECHDC1Q9NTX5 307 aa19.46■□□□□ 0.71
USE1-201ENST00000263897 SERPINB13Q9UIV8 391 aa19.46■□□□□ 0.71
USE1-201ENST00000263897 GDF11O95390 407 aa19.45■□□□□ 0.7
USE1-201ENST00000263897 ADD2P35612 726 aa19.45■□□□□ 0.7
USE1-201ENST00000263897 PRMT2P55345 433 aa19.45■□□□□ 0.7
USE1-201ENST00000263897 TRIM47Q96LD4 638 aa19.45■□□□□ 0.7
USE1-201ENST00000263897 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.45■□□□□ 0.7
USE1-201ENST00000263897 ZSWIM8A7E2V4 1837 aa19.44■□□□□ 0.7
USE1-201ENST00000263897 ECM2O94769 699 aaPredicted RBP19.44■□□□□ 0.7
USE1-201ENST00000263897 FMNL1O95466 1100 aaPredicted RBP19.44■□□□□ 0.7
USE1-201ENST00000263897 HOXD10P28358 340 aa19.44■□□□□ 0.7
USE1-201ENST00000263897 PLCD1P51178 756 aa19.44■□□□□ 0.7
USE1-201ENST00000263897 BACE1P56817 501 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms