RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 EVX2Q03828 476 aa15.27■□□□□ 0.04
VAMP7-201ENST00000262640 NFXL1Q6ZNB6 911 aa15.27■□□□□ 0.04
VAMP7-201ENST00000262640 TNPO1Q92973 898 aaKnown RBP15.27■□□□□ 0.04
VAMP7-201ENST00000262640 ZNF287Q9HBT7 754 aa15.27■□□□□ 0.04
VAMP7-201ENST00000262640 PRDM1O75626 825 aa15.27■□□□□ 0.03
VAMP7-201ENST00000262640 WTAPQ15007 396 aa15.27■□□□□ 0.03
VAMP7-201ENST00000262640 NFKBIBQ15653 356 aa15.27■□□□□ 0.03
VAMP7-201ENST00000262640 IQCA1Q86XH1 822 aa15.27■□□□□ 0.03
VAMP7-201ENST00000262640 AGBL3Q8NEM8 1001 aa15.27■□□□□ 0.03
VAMP7-201ENST00000262640 HDAC9Q9UKV0 1011 aa15.27■□□□□ 0.03
VAMP7-201ENST00000262640 ADAMTSL1Q8N6G6 1762 aa15.27■□□□□ 0.03
VAMP7-201ENST00000262640 FOCADQ5VW36 1801 aa15.27■□□□□ 0.03
VAMP7-201ENST00000262640 ARFGEF1Q9Y6D6 1849 aa15.27■□□□□ 0.03
VAMP7-201ENST00000262640 CCDC69A6NI79 296 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 DHX16O60231 1041 aaKnown RBP15.26■□□□□ 0.03
VAMP7-201ENST00000262640 PDIA4P13667 645 aaKnown RBP15.26■□□□□ 0.03
VAMP7-201ENST00000262640 PLCD1P51178 756 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 PKP1Q13835 747 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 SLC4A8Q2Y0W8 1093 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 APOA5Q6Q788 366 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 HPS5Q9UPZ3 1129 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 BRD1O95696 1058 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 CCT2P78371 535 aaKnown RBP15.26■□□□□ 0.03
VAMP7-201ENST00000262640 CXCL9Q07325 125 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 PICALMQ13492 652 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 CIAPIN1Q6FI81 312 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 TTC6Q86TZ1 520 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 DYNLL2Q96FJ2 89 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 ZSCAN10Q96SZ4 725 aaPredicted RBP15.26■□□□□ 0.03
VAMP7-201ENST00000262640 ZKSCAN3Q9BRR0 538 aa15.26■□□□□ 0.03
VAMP7-201ENST00000262640 DDX4Q9NQI0 724 aaKnown RBP15.26■□□□□ 0.03
VAMP7-201ENST00000262640 PDCP20941 246 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 CFAP100Q494V2 611 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 SYNE3Q6ZMZ3 975 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 C16orf86Q6ZW13 317 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 OGFOD1Q8N543 542 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 SMARCC2Q8TAQ2 1214 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 FHDC1Q9C0D6 1143 aaPredicted RBP15.25■□□□□ 0.03
VAMP7-201ENST00000262640 MKNK2Q9HBH9 465 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 ZDHHC9Q9Y397 364 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 WDR33Q9C0J8 1336 aaKnown RBP15.25■□□□□ 0.03
VAMP7-201ENST00000262640 NPM3O75607 178 aaKnown RBP15.25■□□□□ 0.03
VAMP7-201ENST00000262640 HMGN5P82970 282 aaKnown RBP15.25■□□□□ 0.03
VAMP7-201ENST00000262640 TNIP1Q15025 636 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 SEC23AQ15436 765 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 NSUN7Q8NE18 718 aaKnown RBP15.25■□□□□ 0.03
VAMP7-201ENST00000262640 IDI2Q9BXS1 227 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 OSBPL5Q9H0X9 879 aaPredicted RBP15.25■□□□□ 0.03
VAMP7-201ENST00000262640 SENP2Q9HC62 589 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 NCOA5Q9HCD5 579 aaKnown RBP15.25■□□□□ 0.03
VAMP7-201ENST00000262640 SLC12A7Q9Y666 1083 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 TNKSO95271 1327 aa15.25■□□□□ 0.03
VAMP7-201ENST00000262640 ZBTB43O43298 467 aa15.24■□□□□ 0.03
VAMP7-201ENST00000262640 SYT1P21579 422 aa15.24■□□□□ 0.03
VAMP7-201ENST00000262640 RCAN1P53805 252 aa15.24■□□□□ 0.03
VAMP7-201ENST00000262640 RASSF7Q02833 373 aa15.24■□□□□ 0.03
VAMP7-201ENST00000262640 GBP4Q96PP9 640 aa15.24■□□□□ 0.03
VAMP7-201ENST00000262640 PCDHAC2Q9Y5I4 1007 aa15.24■□□□□ 0.03
VAMP7-201ENST00000262640 TSPY2A6NKD2 308 aa15.24■□□□□ 0.03
VAMP7-201ENST00000262640 STX6O43752 255 aa15.24■□□□□ 0.03
VAMP7-201ENST00000262640 METAP2P50579 478 aaKnown RBP eCLIP15.24■□□□□ 0.03
VAMP7-201ENST00000262640 CCDC178Q5BJE1 867 aa15.24■□□□□ 0.03
VAMP7-201ENST00000262640 CLEC17AQ6ZS10 378 aa15.24■□□□□ 0.03
VAMP7-201ENST00000262640 ENAHQ8N8S7 591 aaPredicted RBP15.24■□□□□ 0.03
VAMP7-201ENST00000262640 KIF3AQ9Y496 699 aa15.24■□□□□ 0.03
VAMP7-201ENST00000262640 NID2Q14112 1375 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 JAK2O60674 1132 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 CTDNEP1O95476 244 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 CDK8P49336 464 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 MMP14P50281 582 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 FAM47AQ5JRC9 791 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 ZNF444Q8N0Y2 327 aaPredicted RBP15.23■□□□□ 0.03
VAMP7-201ENST00000262640 ZBTB12Q9Y330 459 aaPredicted RBP15.23■□□□□ 0.03
VAMP7-201ENST00000262640 MYH1P12882 1939 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 PTPDC1A2A3K4 754 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 CPLX1O14810 134 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 HLA-DOAP06340 250 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 NFIAQ12857 509 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 ECM29Q5VYK3 1845 aa15.23■□□□□ 0.03
VAMP7-201ENST00000262640 SPDYE2BA6NHP3 402 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 GOLGA8AA7E2F4 631 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 SPDYE6P0CI01 402 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 RASA1P20936 1047 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 TFAP4Q01664 338 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 DLGAP5Q15398 846 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 IFIT1BQ5T764 474 aaKnown RBP15.22■□□□□ 0.03
VAMP7-201ENST00000262640 LARP1BQ659C4 914 aaKnown RBP15.22■□□□□ 0.03
VAMP7-201ENST00000262640 MICU3Q86XE3 530 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 DHX36Q9H2U1 1008 aaKnown RBP15.22■□□□□ 0.03
VAMP7-201ENST00000262640 RPS12P25398 132 aaKnown RBP15.22■□□□□ 0.03
VAMP7-201ENST00000262640 NBR1Q14596 966 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 CPLX2Q6PUV4 134 aaKnown RBP15.22■□□□□ 0.03
VAMP7-201ENST00000262640 RAB11FIP4Q86YS3 637 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 FAM184AQ8NB25 1140 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 MTMR14Q8NCE2 650 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 SLC44A5Q8NCS7 719 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 PRMT6Q96LA8 375 aaPredicted RBP15.22■□□□□ 0.03
VAMP7-201ENST00000262640 TDRD3Q9H7E2 651 aaKnown RBP15.22■□□□□ 0.03
VAMP7-201ENST00000262640 TCP11L1Q9NUJ3 509 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 SWAP70Q9UH65 585 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms