RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 LRRC45Q96CN5 670 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 ASAP1Q9ULH1 1129 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 ABL1P00519 1130 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 CCDC117Q8IWD4 279 aaPredicted RBP13.64□□□□□ -0.23
SPG11-201ENST00000261866 SNX29Q8TEQ0 813 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 LRRC24Q50LG9 513 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 PLEKHA4Q9H4M7 779 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 TLDC2A0PJX2 215 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 SUPT20HQ8NEM7 779 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 GLG1Q92896 1179 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 ATP10AO60312 1499 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 CTAGE15A4D2H0 777 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 GCNT3O95395 438 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 DEXIO95424 95 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 CTAGE8P0CG41 777 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 EIF4A1P60842 406 aaKnown RBP13.64□□□□□ -0.23
SPG11-201ENST00000261866 RPS8P62241 208 aaKnown RBP13.64□□□□□ -0.23
SPG11-201ENST00000261866 CKAP4Q07065 602 aaKnown RBP13.64□□□□□ -0.23
SPG11-201ENST00000261866 KIF5AQ12840 1032 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 BRDTQ58F21 947 aaPredicted RBP13.64□□□□□ -0.23
SPG11-201ENST00000261866 CTAGE6Q86UF2 777 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 SESTD1Q86VW0 696 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 CTAGE4Q8IX94 777 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 RASAL2Q9UJF2 1139 aa13.64□□□□□ -0.23
SPG11-201ENST00000261866 UBXN2AP68543 259 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 UTP14CQ5TAP6 766 aaKnown RBP13.63□□□□□ -0.23
SPG11-201ENST00000261866 SPICE1Q8N0Z3 855 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 PLVAPQ9BX97 442 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 DAPK3O43293 454 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 MAST3O60307 1309 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 PRAMEF22A3QJZ6 481 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 ARHGEF16Q5VV41 709 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 FAM200AQ8TCP9 573 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 NEURL1BA8MQ27 555 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 BEND3Q5T5X7 828 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 JAK2O60674 1132 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 SF3A3Q12874 501 aaKnown RBP eCLIP13.63□□□□□ -0.233e-6■□□□□ 9.9
SPG11-201ENST00000261866 EHBP1Q8NDI1 1231 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 PKNOX2Q96KN3 472 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 GPR101Q96P66 508 aaPredicted RBP13.63□□□□□ -0.23
SPG11-201ENST00000261866 DBNDD1Q9H9R9 158 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 EIF2AK4Q9P2K8 1649 aaKnown RBP13.63□□□□□ -0.23
SPG11-201ENST00000261866 GABPAQ06546 454 aa13.63□□□□□ -0.23
SPG11-201ENST00000261866 MROH5Q6ZUA9 1318 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 FAM160A1Q05DH4 1040 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 Q3C1V9 767 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 TTC38Q5R3I4 469 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 ERCC5P28715 1186 aaPredicted RBP13.62□□□□□ -0.23
SPG11-201ENST00000261866 CALCRLQ16602 461 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 FAM102BQ5T8I3 360 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 DPY19L2Q6NUT2 758 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 DIS3L2Q8IYB7 885 aaKnown RBP13.62□□□□□ -0.23
SPG11-201ENST00000261866 DCPSQ96C86 337 aaKnown RBP13.62□□□□□ -0.23
SPG11-201ENST00000261866 THRAP3Q9Y2W1 955 aaKnown RBP13.62□□□□□ -0.23
SPG11-201ENST00000261866 CTAGE9A4FU28 777 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 PHKG2P15735 406 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 ANGEL1Q9UNK9 670 aaKnown RBP13.62□□□□□ -0.23
SPG11-201ENST00000261866 TEKT1Q969V4 418 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 HAUS7Q99871 368 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 GTPBP4Q9BZE4 634 aaKnown RBP13.62□□□□□ -0.23
SPG11-201ENST00000261866 TRPC6Q9Y210 931 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 EDC4Q6P2E9 1401 aaKnown RBP13.62□□□□□ -0.23
SPG11-201ENST00000261866 ADAMTS12P58397 1594 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.62□□□□□ -0.23
SPG11-201ENST00000261866 USP17L12C9JPN9 530 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 USP17L21D6R901 530 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 JAKMIP2Q96AA8 810 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 PPANQ9NQ55 473 aaKnown RBP13.62□□□□□ -0.23
SPG11-201ENST00000261866 PPARAQ07869 468 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 MRPL44Q9H9J2 332 aaKnown RBP13.62□□□□□ -0.23
SPG11-201ENST00000261866 FAM169AQ9Y6X4 670 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 TSPOAP1O95153 1857 aa13.62□□□□□ -0.23
SPG11-201ENST00000261866 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
SPG11-201ENST00000261866 GPKOWQ92917 476 aaPredicted RBP eCLIP13.61□□□□□ -0.23
SPG11-201ENST00000261866 BRAPQ7Z569 592 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 KCNK9Q9NPC2 374 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 WDR62O43379 1518 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 STX10O60499 249 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 MLXIPQ9HAP2 919 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 BTDP43251 543 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 SPAG1Q07617 926 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 PTPROQ16827 1216 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 M0QZ92 97 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 TNFAIP3P21580 790 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 PSMB7Q99436 277 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 GOLGA6L9A6NEM1 432 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 ARID4AP29374 1257 aaPredicted RBP13.61□□□□□ -0.23
SPG11-201ENST00000261866 SYT10Q6XYQ8 523 aa13.61□□□□□ -0.23
SPG11-201ENST00000261866 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 RXRBP28702 533 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 BBXQ8WY36 941 aaPredicted RBP13.6□□□□□ -0.23
SPG11-201ENST00000261866 LRWD1Q9UFC0 647 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 CHRNDQ07001 517 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 E7EVH7 732 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 SPOPO43791 374 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 HERC4Q5GLZ8 1057 aaPredicted RBP13.6□□□□□ -0.23
SPG11-201ENST00000261866 TXNDC16Q9P2K2 825 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 ODF2LQ9ULJ1 636 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 ABCC2Q92887 1545 aa13.6□□□□□ -0.23
SPG11-201ENST00000261866 ANO1Q5XXA6 986 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms