RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.96□□□□□ -0.17
PFDN1-201ENST00000261813 TMOD2Q9NZR1 351 aa13.96□□□□□ -0.17
PFDN1-201ENST00000261813 FAM198AQ9UFP1 575 aa13.96□□□□□ -0.17
PFDN1-201ENST00000261813 BAG3O95817 575 aa13.96□□□□□ -0.18
PFDN1-201ENST00000261813 TNFAIP1Q13829 316 aa13.96□□□□□ -0.18
PFDN1-201ENST00000261813 UBE3CQ15386 1083 aa13.96□□□□□ -0.18
PFDN1-201ENST00000261813 CST9Q5W186 159 aa13.96□□□□□ -0.18
PFDN1-201ENST00000261813 TEPSINQ96N21 525 aa13.96□□□□□ -0.18
PFDN1-201ENST00000261813 RIOK1Q9BRS2 568 aaKnown RBP13.96□□□□□ -0.18
PFDN1-201ENST00000261813 FSD1Q9BTV5 496 aa13.96□□□□□ -0.18
PFDN1-201ENST00000261813 IDI2Q9BXS1 227 aa13.96□□□□□ -0.18
PFDN1-201ENST00000261813 TMEM39BQ9GZU3 492 aa13.96□□□□□ -0.18
PFDN1-201ENST00000261813 ZNF408Q9H9D4 720 aa13.96□□□□□ -0.18
PFDN1-201ENST00000261813 DDX4Q9NQI0 724 aaKnown RBP13.96□□□□□ -0.18
PFDN1-201ENST00000261813 PPP2R3BQ9Y5P8 575 aa13.96□□□□□ -0.18
PFDN1-201ENST00000261813 MYH7P12883 1935 aa13.95□□□□□ -0.18
PFDN1-201ENST00000261813 SSC5DA1L4H1 1573 aa13.95□□□□□ -0.18
PFDN1-201ENST00000261813 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
PFDN1-201ENST00000261813 CELF2O95319 508 aaKnown RBP13.95□□□□□ -0.18
PFDN1-201ENST00000261813 GSPT1P15170 499 aaKnown RBP13.95□□□□□ -0.18
PFDN1-201ENST00000261813 TNNI2P48788 182 aa13.95□□□□□ -0.18
PFDN1-201ENST00000261813 PPP1R15BQ5SWA1 713 aa13.95□□□□□ -0.18
PFDN1-201ENST00000261813 ZSCAN25Q6NSZ9 544 aa13.95□□□□□ -0.18
PFDN1-201ENST00000261813 FAM83AQ86UY5 434 aa13.95□□□□□ -0.18
PFDN1-201ENST00000261813 ZFPM1Q8IX07 1006 aa13.95□□□□□ -0.18
PFDN1-201ENST00000261813 TEX11Q8IYF3 940 aa13.95□□□□□ -0.18
PFDN1-201ENST00000261813 EVI5LQ96CN4 794 aa13.95□□□□□ -0.18
PFDN1-201ENST00000261813 LARP6Q9BRS8 491 aaKnown RBP13.95□□□□□ -0.18
PFDN1-201ENST00000261813 NOL10Q9BSC4 688 aaKnown RBP13.95□□□□□ -0.18
PFDN1-201ENST00000261813 RNF113AO15541 343 aaKnown RBP13.94□□□□□ -0.18
PFDN1-201ENST00000261813 TCP10Q12799 353 aa13.94□□□□□ -0.18
PFDN1-201ENST00000261813 PICALMQ13492 652 aa13.94□□□□□ -0.18
PFDN1-201ENST00000261813 BMP2KLQ5H9B9 411 aa13.94□□□□□ -0.18
PFDN1-201ENST00000261813 TTC22Q5TAA0 569 aa13.94□□□□□ -0.18
PFDN1-201ENST00000261813 NBPF12Q5TAG4 269 aaPredicted RBP13.94□□□□□ -0.18
PFDN1-201ENST00000261813 PTCD2Q8WV60 388 aaKnown RBP13.94□□□□□ -0.18
PFDN1-201ENST00000261813 FAM151AQ8WW52 585 aa13.94□□□□□ -0.18
PFDN1-201ENST00000261813 MARVELD3Q96A59 401 aa13.94□□□□□ -0.18
PFDN1-201ENST00000261813 PUS7LQ9H0K6 701 aaKnown RBP13.94□□□□□ -0.18
PFDN1-201ENST00000261813 RPAP1Q9BWH6 1393 aaPredicted RBP13.93□□□□□ -0.18
PFDN1-201ENST00000261813 TRPM7Q96QT4 1865 aa13.93□□□□□ -0.18
PFDN1-201ENST00000261813 MAGEB6P1A0A0J9YX57 407 aa13.93□□□□□ -0.18
PFDN1-201ENST00000261813 TRIM6-TRIM34B2RNG4 842 aa13.93□□□□□ -0.18
PFDN1-201ENST00000261813 ENTPD3O75355 529 aa13.93□□□□□ -0.18
PFDN1-201ENST00000261813 ZFYP08048 801 aaPredicted RBP13.93□□□□□ -0.18
PFDN1-201ENST00000261813 MAP2K1Q02750 393 aaPredicted RBP13.93□□□□□ -0.18
PFDN1-201ENST00000261813 DEFB115Q30KQ5 88 aa13.93□□□□□ -0.18
PFDN1-201ENST00000261813 LCORLQ8N3X6 602 aa13.93□□□□□ -0.18
PFDN1-201ENST00000261813 APPBP2Q92624 585 aa13.93□□□□□ -0.18
PFDN1-201ENST00000261813 RILPL2Q969X0 211 aa13.93□□□□□ -0.18
PFDN1-201ENST00000261813 PLSCR2Q9NRY7 297 aa13.93□□□□□ -0.18
PFDN1-201ENST00000261813 WBP1LQ9NX94 342 aa13.93□□□□□ -0.18
PFDN1-201ENST00000261813 MBD4O95243 580 aa13.92□□□□□ -0.18
PFDN1-201ENST00000261813 LBX1P52954 281 aa13.92□□□□□ -0.18
PFDN1-201ENST00000261813 SH3BP5LQ7L8J4 393 aa13.92□□□□□ -0.18
PFDN1-201ENST00000261813 TGFBRAP1Q8WUH2 860 aa13.92□□□□□ -0.18
PFDN1-201ENST00000261813 OSBP2Q969R2 916 aa13.92□□□□□ -0.18
PFDN1-201ENST00000261813 DDX27Q96GQ7 796 aaKnown RBP13.92□□□□□ -0.18
PFDN1-201ENST00000261813 ARMT1Q9H993 441 aa13.92□□□□□ -0.18
PFDN1-201ENST00000261813 ABT1Q9ULW3 272 aaKnown RBP13.92□□□□□ -0.18
PFDN1-201ENST00000261813 FZD1Q9UP38 647 aa13.92□□□□□ -0.18
PFDN1-201ENST00000261813 FLT1P17948 1338 aa13.91□□□□□ -0.18
PFDN1-201ENST00000261813 CDK5RAP2Q96SN8 1893 aa13.91□□□□□ -0.18
PFDN1-201ENST00000261813 DDTLA6NHG4 134 aaPredicted RBP13.91□□□□□ -0.18
PFDN1-201ENST00000261813 RASSF10A6NK89 507 aa13.91□□□□□ -0.18
PFDN1-201ENST00000261813 LRRFIP1Q32MZ4 808 aaKnown RBP13.91□□□□□ -0.18
PFDN1-201ENST00000261813 ZMYM1Q5SVZ6 1142 aa13.91□□□□□ -0.18
PFDN1-201ENST00000261813 MOB2Q70IA6 237 aa13.91□□□□□ -0.18
PFDN1-201ENST00000261813 CERS3Q8IU89 383 aa13.91□□□□□ -0.18
PFDN1-201ENST00000261813 MAPKAPK5Q8IW41 473 aa13.91□□□□□ -0.18
PFDN1-201ENST00000261813 SEC62Q99442 399 aaKnown RBP13.91□□□□□ -0.18
PFDN1-201ENST00000261813 OSBPL5Q9H0X9 879 aaPredicted RBP13.91□□□□□ -0.18
PFDN1-201ENST00000261813 GBA2Q9HCG7 927 aaPredicted RBP13.91□□□□□ -0.18
PFDN1-201ENST00000261813 FOCADQ5VW36 1801 aa13.91□□□□□ -0.18
PFDN1-201ENST00000261813 PAPPA2Q9BXP8 1791 aa13.9□□□□□ -0.18
PFDN1-201ENST00000261813 M0R2C6 588 aa13.9□□□□□ -0.18
PFDN1-201ENST00000261813 SDSP20132 328 aa13.9□□□□□ -0.18
PFDN1-201ENST00000261813 EMP3P54852 163 aa13.9□□□□□ -0.18
PFDN1-201ENST00000261813 SUPT20HL1Q3ZLR7 823 aa13.9□□□□□ -0.18
PFDN1-201ENST00000261813 ARSIQ5FYB1 569 aa13.9□□□□□ -0.18
PFDN1-201ENST00000261813 BEGAINQ9BUH8 593 aa13.9□□□□□ -0.18
PFDN1-201ENST00000261813 ATRNL1Q5VV63 1379 aa13.89□□□□□ -0.19
PFDN1-201ENST00000261813 WDR33Q9C0J8 1336 aaKnown RBP13.89□□□□□ -0.19
PFDN1-201ENST00000261813 COL2A1P02458 1487 aaPredicted RBP13.89□□□□□ -0.19
PFDN1-201ENST00000261813 PRKAB2O43741 272 aa13.89□□□□□ -0.19
PFDN1-201ENST00000261813 NF2P35240 595 aa13.89□□□□□ -0.19
PFDN1-201ENST00000261813 USP5P45974 858 aa13.89□□□□□ -0.19
PFDN1-201ENST00000261813 PRKG1Q13976 671 aa13.89□□□□□ -0.19
PFDN1-201ENST00000261813 TICAM2Q86XR7 235 aa13.89□□□□□ -0.19
PFDN1-201ENST00000261813 C2orf69Q8N8R5 385 aa13.89□□□□□ -0.19
PFDN1-201ENST00000261813 SDR42E1Q8WUS8 393 aa13.89□□□□□ -0.19
PFDN1-201ENST00000261813 FAM227BQ96M60 508 aa13.89□□□□□ -0.19
PFDN1-201ENST00000261813 STRBPQ96SI9 672 aaKnown RBP13.89□□□□□ -0.19
PFDN1-201ENST00000261813 CRNKL1Q9BZJ0 848 aaKnown RBP13.89□□□□□ -0.19
PFDN1-201ENST00000261813 PCDHGA4Q9Y5G9 962 aa13.89□□□□□ -0.19
PFDN1-201ENST00000261813 TLL2Q9Y6L7 1015 aa13.89□□□□□ -0.19
PFDN1-201ENST00000261813 DDX60LQ5H9U9 1706 aaKnown RBP13.89□□□□□ -0.19
PFDN1-201ENST00000261813 GPAA1O43292 621 aa13.88□□□□□ -0.19
PFDN1-201ENST00000261813 SLURP2P0DP57 97 aa13.88□□□□□ -0.19
PFDN1-201ENST00000261813 ECE1P42892 770 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms