RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TRPM2O94759 1503 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 PDE8AO60658 829 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 KCNJ14Q9UNX9 436 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 SORBS3O60504 671 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 STRN3Q13033 797 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 CNNM4Q6P4Q7 775 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 INTS4Q96HW7 963 aaKnown RBP13.53□□□□□ -0.24
COL8A1-201ENST00000261037 TESK2Q96S53 571 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 RBSNQ9H1K0 784 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 ANAPC4Q9UJX5 808 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 LMTK3Q96Q04 1460 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 TTC38Q5R3I4 469 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 SNX16P57768 344 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 JAKMIP2Q96AA8 810 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 TRIM31Q9BZY9 425 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 BLZF1Q9H2G9 400 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 USTQ9Y2C2 406 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 STX10O60499 249 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 SMTNP53814 917 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 TRPC3Q13507 836 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 NELFCDQ8IXH7 590 aa13.53□□□□□ -0.24
COL8A1-201ENST00000261037 EVCP57679 992 aa13.52□□□□□ -0.24
COL8A1-201ENST00000261037 PPP2R5DQ14738 602 aa13.52□□□□□ -0.24
COL8A1-201ENST00000261037 FAM47AQ5JRC9 791 aa13.52□□□□□ -0.24
COL8A1-201ENST00000261037 TRIM7Q9C029 511 aa13.52□□□□□ -0.24
COL8A1-201ENST00000261037 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.52□□□□□ -0.25
COL8A1-201ENST00000261037 C17orf53Q8N3J3 647 aaPredicted RBP13.52□□□□□ -0.25
COL8A1-201ENST00000261037 CSGALNACT2Q8N6G5 542 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 PPANQ9NQ55 473 aaKnown RBP13.52□□□□□ -0.25
COL8A1-201ENST00000261037 SAMD15Q9P1V8 674 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 U2AF2P26368 475 aaKnown RBP eCLIP13.52□□□□□ -0.25
COL8A1-201ENST00000261037 CPXCR1Q8N123 301 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 FAM76AQ8TAV0 307 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 TMEM87BQ96K49 555 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 RABEP2Q9H5N1 569 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 TAB2Q9NYJ8 693 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 ARHGEF35A5YM69 484 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 CRCPO75575 148 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 GEN1Q17RS7 908 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 CCDC14Q49A88 953 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 RILPL1Q5EBL4 403 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 TGFBRAP1Q8WUH2 860 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 NOD1Q9Y239 953 aa13.52□□□□□ -0.25
COL8A1-201ENST00000261037 ADCY7P51828 1080 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 INF2Q27J81 1249 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 DIS3L2Q8IYB7 885 aaKnown RBP13.51□□□□□ -0.25
COL8A1-201ENST00000261037 SMC1BQ8NDV3 1235 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 IFT74Q96LB3 600 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 NOP56O00567 594 aaKnown RBP13.51□□□□□ -0.25
COL8A1-201ENST00000261037 PAK1Q13153 545 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 CYP26C1Q6V0L0 522 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 SNX29Q8TEQ0 813 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 FAM204AQ9H8W3 233 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 ZAP70P43403 619 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 FAM98CQ17RN3 349 aaKnown RBP13.51□□□□□ -0.25
COL8A1-201ENST00000261037 STAMQ92783 540 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 PSMB7Q99436 277 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 PLEKHA4Q9H4M7 779 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 SH3TC1Q8TE82 1336 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 PNMA6EA0A0J9YXQ4 647 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 HGSO14964 777 aaPredicted RBP13.51□□□□□ -0.25
COL8A1-201ENST00000261037 DAPK3O43293 454 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 VIMP08670 466 aaKnown RBP13.51□□□□□ -0.25
COL8A1-201ENST00000261037 DPP8Q6V1X1 898 aaPredicted RBP13.51□□□□□ -0.25
COL8A1-201ENST00000261037 SPATA5Q8NB90 893 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 CCDC26Q8TAB7 109 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 NAPGQ99747 312 aaPredicted RBP13.51□□□□□ -0.25
COL8A1-201ENST00000261037 ANGEL1Q9UNK9 670 aaKnown RBP13.51□□□□□ -0.25
COL8A1-201ENST00000261037 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.51□□□□□ -0.25
COL8A1-201ENST00000261037 ZNF532Q9HCE3 1301 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 GTF2A1P52655 376 aaPredicted RBP13.51□□□□□ -0.25
COL8A1-201ENST00000261037 FANCCQ00597 558 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 HAUS3Q68CZ6 603 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 MYCT1Q8N699 235 aa13.51□□□□□ -0.25
COL8A1-201ENST00000261037 GADD45BO75293 160 aaPredicted RBP13.5□□□□□ -0.25
COL8A1-201ENST00000261037 GAS8O95995 478 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 CDC37L1Q7L3B6 337 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 HDXQ7Z353 690 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 APPBP2Q92624 585 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 CCDC117Q8IWD4 279 aaPredicted RBP13.5□□□□□ -0.25
COL8A1-201ENST00000261037 CLSTN2Q9H4D0 955 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 KRT19P08727 400 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 SF3A3Q12874 501 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL8A1-201ENST00000261037 GTPBP4Q9BZE4 634 aaKnown RBP13.5□□□□□ -0.25
COL8A1-201ENST00000261037 SLC52A2Q9HAB3 445 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 STK32BQ9NY57 414 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 TBX22Q9Y458 520 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 NEO1Q92859 1461 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 SETDB1Q15047 1291 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 CMTR1Q8N1G2 835 aaKnown RBP13.5□□□□□ -0.25
COL8A1-201ENST00000261037 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
COL8A1-201ENST00000261037 KIAA1524Q8TCG1 905 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 ORAI2Q96SN7 254 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 HAUS7Q99871 368 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 EBAG9O00559 213 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 JAK2O60674 1132 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 GCNT3O95395 438 aa13.49□□□□□ -0.25
COL8A1-201ENST00000261037 TUBB4AP04350 444 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms