RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 DOCK1Q14185 1865 aa24.64■■□□□ 1.53
RTCA-201ENST00000260563 TRIM34Q9BYJ4 488 aa24.64■■□□□ 1.53
RTCA-201ENST00000260563 PPP1R12BO60237 982 aaPredicted RBP24.63■■□□□ 1.53
RTCA-201ENST00000260563 PLCD1P51178 756 aa24.63■■□□□ 1.53
RTCA-201ENST00000260563 TTLL12Q14166 644 aaPredicted RBP24.63■■□□□ 1.53
RTCA-201ENST00000260563 ALX1Q15699 326 aa24.63■■□□□ 1.53
RTCA-201ENST00000260563 SBK1Q52WX2 424 aa24.63■■□□□ 1.53
RTCA-201ENST00000260563 MIGA2Q7L4E1 593 aa24.63■■□□□ 1.53
RTCA-201ENST00000260563 CRACR2BQ8N4Y2 399 aaPredicted RBP24.63■■□□□ 1.53
RTCA-201ENST00000260563 EHD4Q9H223 541 aa24.63■■□□□ 1.53
RTCA-201ENST00000260563 MINDY4BA8MYZ0 360 aa24.62■■□□□ 1.53
RTCA-201ENST00000260563 CYP2D6P10635 497 aa24.62■■□□□ 1.53
RTCA-201ENST00000260563 PRKG1Q13976 671 aa24.62■■□□□ 1.53
RTCA-201ENST00000260563 C12orf60Q5U649 245 aa24.62■■□□□ 1.53
RTCA-201ENST00000260563 GBA2Q9HCG7 927 aaPredicted RBP24.62■■□□□ 1.53
RTCA-201ENST00000260563 HERC5Q9UII4 1024 aaKnown RBP24.62■■□□□ 1.53
RTCA-201ENST00000260563 SERPINB13Q9UIV8 391 aa24.62■■□□□ 1.53
RTCA-201ENST00000260563 ROBO3Q96MS0 1386 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 CYP2D7A0A087X1C5 515 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 FGAP02671 866 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 RBM25P49756 843 aaKnown RBP24.61■■□□□ 1.53
RTCA-201ENST00000260563 MAP4K1Q92918 833 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 ZNF341Q9BYN7 854 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.61■■□□□ 1.53
RTCA-201ENST00000260563 FZD1Q9UP38 647 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 TBC1D12O60347 775 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 MCCP23508 829 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 FKBP1BP68106 108 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 CST9Q5W186 159 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 ARMC9Q7Z3E5 817 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 FOXP4Q8IVH2 680 aaPredicted RBP24.61■■□□□ 1.53
RTCA-201ENST00000260563 C2orf69Q8N8R5 385 aa24.61■■□□□ 1.53
RTCA-201ENST00000260563 ANGEL1Q9UNK9 670 aaKnown RBP24.61■■□□□ 1.53
RTCA-201ENST00000260563 EVX2Q03828 476 aa24.6■■□□□ 1.53
RTCA-201ENST00000260563 PPARAQ07869 468 aa24.6■■□□□ 1.53
RTCA-201ENST00000260563 FAM196BA6NMK8 535 aa24.59■■□□□ 1.53
RTCA-201ENST00000260563 SLURP2P0DP57 97 aa24.59■■□□□ 1.53
RTCA-201ENST00000260563 IREB2P48200 963 aaKnown RBP24.59■■□□□ 1.53
RTCA-201ENST00000260563 METTL16Q86W50 562 aaKnown RBP24.59■■□□□ 1.53
RTCA-201ENST00000260563 CTNNA3Q9UI47 895 aa24.59■■□□□ 1.53
RTCA-201ENST00000260563 RBM8AQ9Y5S9 174 aaKnown RBP24.59■■□□□ 1.53
RTCA-201ENST00000260563 TMEM88BA6NKF7 163 aa24.58■■□□□ 1.53
RTCA-201ENST00000260563 HSPA4P34932 840 aa24.58■■□□□ 1.53
RTCA-201ENST00000260563 APLP1P51693 650 aa24.58■■□□□ 1.53
RTCA-201ENST00000260563 MAP3K10Q02779 954 aa24.58■■□□□ 1.53
RTCA-201ENST00000260563 DNAJC18Q9H819 358 aa24.58■■□□□ 1.53
RTCA-201ENST00000260563 RBM19Q9Y4C8 960 aaKnown RBP24.58■■□□□ 1.53
RTCA-201ENST00000260563 USP2O75604 605 aaPredicted RBP24.57■■□□□ 1.52
RTCA-201ENST00000260563 SLC3A2P08195 630 aaKnown RBP24.57■■□□□ 1.52
RTCA-201ENST00000260563 GABPAQ06546 454 aa24.57■■□□□ 1.52
RTCA-201ENST00000260563 MAP3K11Q16584 847 aa24.57■■□□□ 1.52
RTCA-201ENST00000260563 WRNIP1Q96S55 665 aa24.57■■□□□ 1.52
RTCA-201ENST00000260563 SWAP70Q9UH65 585 aa24.57■■□□□ 1.52
RTCA-201ENST00000260563 TAOK2Q9UL54 1235 aa24.57■■□□□ 1.52
RTCA-201ENST00000260563 U3KPZ7 1027 aaPredicted RBP24.57■■□□□ 1.52
RTCA-201ENST00000260563 NECTIN1Q15223 517 aa24.56■■□□□ 1.52
RTCA-201ENST00000260563 C16orf86Q6ZW13 317 aa24.56■■□□□ 1.52
RTCA-201ENST00000260563 MOB2Q70IA6 237 aa24.56■■□□□ 1.52
RTCA-201ENST00000260563 KLRG1Q96E93 195 aa24.56■■□□□ 1.52
RTCA-201ENST00000260563 DYNLL2Q96FJ2 89 aa24.56■■□□□ 1.52
RTCA-201ENST00000260563 SMIM22K7EJ46 135 aa24.56■■□□□ 1.52
RTCA-201ENST00000260563 C1QTNF8P60827 252 aa24.56■■□□□ 1.52
RTCA-201ENST00000260563 HAND2P61296 217 aa24.56■■□□□ 1.52
RTCA-201ENST00000260563 IMMTQ16891 758 aaKnown RBP24.56■■□□□ 1.52
RTCA-201ENST00000260563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.56■■□□□ 1.52
RTCA-201ENST00000260563 ZNF213O14771 459 aa24.55■■□□□ 1.52
RTCA-201ENST00000260563 STK11IPQ8N1F8 1099 aa24.55■■□□□ 1.52
RTCA-201ENST00000260563 SLC44A5Q8NCS7 719 aa24.55■■□□□ 1.52
RTCA-201ENST00000260563 ANAPC4Q9UJX5 808 aa24.55■■□□□ 1.52
RTCA-201ENST00000260563 CTDSPL2Q05D32 466 aa24.54■■□□□ 1.52
RTCA-201ENST00000260563 ZNF287Q9HBT7 754 aa24.54■■□□□ 1.52
RTCA-201ENST00000260563 CREBZFQ9NS37 354 aa24.54■■□□□ 1.52
RTCA-201ENST00000260563 ZNF112Q9UJU3 913 aa24.54■■□□□ 1.52
RTCA-201ENST00000260563 ABT1Q9ULW3 272 aaKnown RBP24.54■■□□□ 1.52
RTCA-201ENST00000260563 GREB1LQ9C091 1923 aaPredicted RBP24.53■■□□□ 1.52
RTCA-201ENST00000260563 PHF20L1A8MW92 1017 aa24.53■■□□□ 1.52
RTCA-201ENST00000260563 SHMT1P34896 483 aa24.53■■□□□ 1.52
RTCA-201ENST00000260563 CDK8P49336 464 aa24.53■■□□□ 1.52
RTCA-201ENST00000260563 HUNKP57058 714 aa24.53■■□□□ 1.52
RTCA-201ENST00000260563 PDE4BQ07343 736 aa24.53■■□□□ 1.52
RTCA-201ENST00000260563 ANKRD13AQ8IZ07 590 aa24.53■■□□□ 1.52
RTCA-201ENST00000260563 TLL2Q9Y6L7 1015 aa24.53■■□□□ 1.52
RTCA-201ENST00000260563 PHIPQ8WWQ0 1821 aa24.53■■□□□ 1.52
RTCA-201ENST00000260563 UBE2Q2LH0YL09 131 aa24.52■■□□□ 1.52
RTCA-201ENST00000260563 ANAPC15P60006 121 aa24.52■■□□□ 1.52
RTCA-201ENST00000260563 MAP3K9P80192 1104 aa24.52■■□□□ 1.52
RTCA-201ENST00000260563 RNF20Q5VTR2 975 aa24.52■■□□□ 1.52
RTCA-201ENST00000260563 CREB3L3Q68CJ9 461 aa24.52■■□□□ 1.52
RTCA-201ENST00000260563 TATDN1Q6P1N9 297 aa24.52■■□□□ 1.52
RTCA-201ENST00000260563 SAPCD2Q86UD0 394 aa24.52■■□□□ 1.52
RTCA-201ENST00000260563 CSADQ9Y600 493 aa24.52■■□□□ 1.52
RTCA-201ENST00000260563 SLC27A2O14975 620 aa24.51■■□□□ 1.51
RTCA-201ENST00000260563 INPP5BP32019 993 aa24.51■■□□□ 1.51
RTCA-201ENST00000260563 KCNB2Q92953 911 aa24.51■■□□□ 1.51
RTCA-201ENST00000260563 MKNK2Q9HBH9 465 aa24.51■■□□□ 1.51
RTCA-201ENST00000260563 UNCXA6NJT0 531 aa24.51■■□□□ 1.51
RTCA-201ENST00000260563 CTNND1O60716 968 aaKnown RBP24.51■■□□□ 1.51
RTCA-201ENST00000260563 VGLL4Q14135 290 aa24.51■■□□□ 1.51
RTCA-201ENST00000260563 CERKLQ49MI3 558 aaPredicted RBP24.51■■□□□ 1.51
RTCA-201ENST00000260563 LDLRAD1Q5T700 205 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms