RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 VEZTQ9HBM0 779 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 FAN1Q9Y2M0 1017 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 KDM5CP41229 1560 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 LRRC27Q9C0I9 530 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 ATP2A1O14983 1001 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 ETF1P62495 437 aaKnown RBP10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 NAA16Q6N069 864 aaPredicted RBP10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 KSR1Q8IVT5 923 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 GBP5Q96PP8 586 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 UTP11Q9Y3A2 253 aaKnown RBP10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 ATP6V0A2Q9Y487 856 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 GOLGA8FQ08AF8 430 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 GOLGA8DPQ0D2H9 430 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 RUFY4Q6ZNE9 571 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 DDX41Q9UJV9 622 aaKnown RBP10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 ANAPC4Q9UJX5 808 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 YTHDC2Q9H6S0 1430 aaKnown RBP10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 MAGEB6P1A0A0J9YX57 407 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 KIF3CO14782 793 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 PAK2Q13177 524 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 MUM1Q2TAK8 710 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 UNC5CLQ8IV45 518 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 COMMD10Q9Y6G5 202 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 BAG3O95817 575 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 ZNF853P0CG23 659 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 ERCC5P28715 1186 aaPredicted RBP10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 PTPN21Q16825 1174 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 KRT71Q3SY84 523 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 KCTD16Q68DU8 428 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 DTHD1Q6ZMT9 781 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 SMARCC2Q8TAQ2 1214 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 STAMQ92783 540 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 PPP1R13BQ96KQ4 1090 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 TPD52P55327 224 aaPredicted RBP10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 SESN3P58005 492 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 RPUSD2Q8IZ73 545 aaKnown RBP10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 FAM71BQ8TC56 605 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 DDX23Q9BUQ8 820 aaKnown RBP10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 TEX13AQ9BXU3 409 aaPredicted RBP10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 SPATS2LQ9NUQ6 558 aaKnown RBP10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 CEP104O60308 925 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 TMTC1Q8IUR5 882 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 LRRC45Q96CN5 670 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 MAGI3Q5TCQ9 1506 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 IRX5P78411 483 aaPredicted RBP10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 CCDC152Q4G0S7 254 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 CEP128Q6ZU80 1094 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 USP28Q96RU2 1077 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 POGZQ7Z3K3 1410 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 ZMYM3Q14202 1370 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 A0A087WWV3 80 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 A0A0D9SFI3 127 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 MBD4O95243 580 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 SF3B2Q13435 895 aaKnown RBP10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 ANKRD42Q8N9B4 389 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 DCAF17Q5H9S7 520 aaPredicted RBP10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 FYB2Q5VWT5 728 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 USP44Q9H0E7 712 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 VCX3BQ9H321 246 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 SAR1BQ9Y6B6 198 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 USH1CQ9Y6N9 552 aa10.88□□□□□ -0.67
CTDSPL2-201ENST00000260327 MAST1Q9Y2H9 1570 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 TRIM14Q14142 442 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 TERF2Q15554 542 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 NOX5Q96PH1 765 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 JAG2Q9Y219 1238 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 ADGRL2O95490 1459 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 KDM5AP29375 1690 aaKnown RBP10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 C6orf229H3BNL8 230 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 ADCK5Q3MIX3 580 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 EFCC1Q9HA90 598 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 ABCC10Q5T3U5 1492 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 CLCN6P51797 869 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 MAP7D1Q3KQU3 841 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 CCDC174Q6PII3 467 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 STXBP4Q6ZWJ1 553 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 DIS3L2Q8IYB7 885 aaKnown RBP10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 ZCRB1Q8TBF4 217 aaKnown RBP10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 CABLES1Q8TDN4 633 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 ANGEL1Q9UNK9 670 aaKnown RBP10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 IFT88Q13099 833 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 RILPL1Q5EBL4 403 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 FBXO38Q6PIJ6 1188 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 EFCAB13Q8IY85 973 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 SREK1Q8WXA9 508 aaKnown RBP10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 PLEKHF1Q96S99 279 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 PPP1R1BQ9UD71 204 aaPredicted RBP10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 KCNJ14Q9UNX9 436 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 CETN3O15182 167 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 SEL1L2Q5TEA6 688 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 N4BP2L2Q92802 583 aaPredicted RBP10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 FAM89AQ96GI7 184 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 GOLGA8KD6RF30 607 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 EXOC5O00471 708 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 GPAA1O43292 621 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 SMIM24O75264 130 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 ATP5DP30049 168 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 POSTNQ15063 836 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms