RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 TTF2Q9UNY4 1162 aaKnown RBP8.7□□□□□ -1.02
TRA2B-201ENST00000259043 SAMM50Q9Y512 469 aa8.7□□□□□ -1.02
TRA2B-201ENST00000259043 CTSHP09668 335 aa8.69□□□□□ -1.02
TRA2B-201ENST00000259043 ERCC3P19447 782 aa8.69□□□□□ -1.02
TRA2B-201ENST00000259043 ERVK-24P63145 666 aa8.69□□□□□ -1.02
TRA2B-201ENST00000259043 HNRNPUQ00839 825 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRA2B-201ENST00000259043 RING1Q06587 406 aa8.69□□□□□ -1.02
TRA2B-201ENST00000259043 PKN1Q16512 942 aa8.69□□□□□ -1.02
TRA2B-201ENST00000259043 TMC4Q7Z404 712 aa8.69□□□□□ -1.02
TRA2B-201ENST00000259043 PLD6Q8N2A8 252 aaKnown RBP8.69□□□□□ -1.02
TRA2B-201ENST00000259043 FAM168AQ92567 244 aa8.69□□□□□ -1.02
TRA2B-201ENST00000259043 CYP8B1Q9UNU6 501 aa8.69□□□□□ -1.02
TRA2B-201ENST00000259043 CD8BP10966 210 aa8.68□□□□□ -1.02
TRA2B-201ENST00000259043 NTF4P34130 210 aa8.68□□□□□ -1.02
TRA2B-201ENST00000259043 LRRC14Q15048 493 aa8.68□□□□□ -1.02
TRA2B-201ENST00000259043 TMEM40Q8WWA1 233 aa8.68□□□□□ -1.02
TRA2B-201ENST00000259043 VAV3Q9UKW4 847 aa8.68□□□□□ -1.02
TRA2B-201ENST00000259043 RNASE1P07998 156 aaKnown RBP8.67□□□□□ -1.02
TRA2B-201ENST00000259043 FAM87AP0C7U9 286 aa8.67□□□□□ -1.02
TRA2B-201ENST00000259043 HCLS1P14317 486 aaPredicted RBP8.67□□□□□ -1.02
TRA2B-201ENST00000259043 PTPN11Q06124 597 aaPredicted RBP8.67□□□□□ -1.02
TRA2B-201ENST00000259043 MEI1Q5TIA1 1274 aa8.67□□□□□ -1.02
TRA2B-201ENST00000259043 SPOCD1Q6ZMY3 1216 aa8.67□□□□□ -1.02
TRA2B-201ENST00000259043 SMYD4Q8IYR2 804 aaPredicted RBP8.67□□□□□ -1.02
TRA2B-201ENST00000259043 RNF214Q8ND24 703 aa8.67□□□□□ -1.02
TRA2B-201ENST00000259043 GAL3ST3Q96A11 431 aa8.67□□□□□ -1.02
TRA2B-201ENST00000259043 FAM161BQ96MY7 647 aa8.67□□□□□ -1.02
TRA2B-201ENST00000259043 PIDD1Q9HB75 910 aa8.67□□□□□ -1.02
TRA2B-201ENST00000259043 MBNL3Q9NUK0 354 aaKnown RBP8.67□□□□□ -1.02
TRA2B-201ENST00000259043 PRKCQQ04759 706 aa8.66□□□□□ -1.02
TRA2B-201ENST00000259043 PSMD2Q13200 908 aa8.66□□□□□ -1.02
TRA2B-201ENST00000259043 KSR1Q8IVT5 923 aa8.66□□□□□ -1.02
TRA2B-201ENST00000259043 FAM181AQ8N9Y4 354 aa8.66□□□□□ -1.02
TRA2B-201ENST00000259043 ISL2Q96A47 359 aa8.66□□□□□ -1.02
TRA2B-201ENST00000259043 ACSBG1Q96GR2 724 aa8.66□□□□□ -1.02
TRA2B-201ENST00000259043 CDK5R2Q13319 367 aa8.65□□□□□ -1.02
TRA2B-201ENST00000259043 CCDC85BQ15834 202 aaPredicted RBP8.65□□□□□ -1.02
TRA2B-201ENST00000259043 TTBK2Q6IQ55 1244 aa8.65□□□□□ -1.02
TRA2B-201ENST00000259043 PI4K2BQ8TCG2 481 aa8.65□□□□□ -1.02
TRA2B-201ENST00000259043 KRTAP4-2Q9BYR5 136 aa8.65□□□□□ -1.02
TRA2B-201ENST00000259043 MKNK2Q9HBH9 465 aa8.65□□□□□ -1.02
TRA2B-201ENST00000259043 ADAMTS6Q9UKP5 1117 aa8.65□□□□□ -1.02
TRA2B-201ENST00000259043 PPM1JQ5JR12 505 aa8.64□□□□□ -1.03
TRA2B-201ENST00000259043 SLC38A3Q99624 504 aa8.64□□□□□ -1.03
TRA2B-201ENST00000259043 PCOLCE2Q9UKZ9 415 aa8.64□□□□□ -1.03
TRA2B-201ENST00000259043 PCDHA4Q9UN74 947 aa8.64□□□□□ -1.03
TRA2B-201ENST00000259043 USP31Q70CQ4 1352 aa8.63□□□□□ -1.03
TRA2B-201ENST00000259043 DCDC2CA8MYV0 355 aa8.63□□□□□ -1.03
TRA2B-201ENST00000259043 RNGTTO60942 597 aaKnown RBP8.63□□□□□ -1.03
TRA2B-201ENST00000259043 ST13P50502 369 aaKnown RBP8.63□□□□□ -1.03
TRA2B-201ENST00000259043 RPS26P62854 115 aaKnown RBP8.63□□□□□ -1.03
TRA2B-201ENST00000259043 XPCQ01831 940 aaPredicted RBP8.63□□□□□ -1.03
TRA2B-201ENST00000259043 INPP5AQ14642 412 aa8.63□□□□□ -1.03
TRA2B-201ENST00000259043 IFI16Q16666 785 aaKnown RBP8.63□□□□□ -1.03
TRA2B-201ENST00000259043 UBE3DQ7Z6J8 389 aa8.63□□□□□ -1.03
TRA2B-201ENST00000259043 C12orf40Q86WS4 652 aa8.63□□□□□ -1.03
TRA2B-201ENST00000259043 LRRN4CLQ8ND94 238 aa8.63□□□□□ -1.03
TRA2B-201ENST00000259043 CSADQ9Y600 493 aa8.63□□□□□ -1.03
TRA2B-201ENST00000259043 TAF1CQ15572 869 aaPredicted RBP8.62□□□□□ -1.03
TRA2B-201ENST00000259043 ZBTB37Q5TC79 503 aa8.62□□□□□ -1.03
TRA2B-201ENST00000259043 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.62□□□□□ -1.03
TRA2B-201ENST00000259043 AGMOQ6ZNB7 445 aa8.62□□□□□ -1.03
TRA2B-201ENST00000259043 PCDHB5Q9Y5E4 795 aa8.62□□□□□ -1.03
TRA2B-201ENST00000259043 CD96P40200 585 aa8.61□□□□□ -1.03
TRA2B-201ENST00000259043 LIG3P49916 1009 aa8.61□□□□□ -1.03
TRA2B-201ENST00000259043 AOC3Q16853 763 aa8.61□□□□□ -1.03
TRA2B-201ENST00000259043 LRFN4Q6PJG9 635 aa8.61□□□□□ -1.03
TRA2B-201ENST00000259043 CYFIP1Q7L576 1253 aa8.61□□□□□ -1.03
TRA2B-201ENST00000259043 HRASLS5Q96KN8 279 aa8.61□□□□□ -1.03
TRA2B-201ENST00000259043 NOC4LQ9BVI4 516 aaKnown RBP8.61□□□□□ -1.03
TRA2B-201ENST00000259043 FANCGO15287 622 aa8.6□□□□□ -1.03
TRA2B-201ENST00000259043 SORBS3O60504 671 aa8.6□□□□□ -1.03
TRA2B-201ENST00000259043 CDK8P49336 464 aa8.6□□□□□ -1.03
TRA2B-201ENST00000259043 KRTAP19-4Q3LI73 84 aa8.6□□□□□ -1.03
TRA2B-201ENST00000259043 HOMEZQ8IX15 550 aa8.6□□□□□ -1.03
TRA2B-201ENST00000259043 BHLHE22Q8NFJ8 381 aaPredicted RBP8.6□□□□□ -1.03
TRA2B-201ENST00000259043 PLPPR2Q96GM1 343 aa8.6□□□□□ -1.03
TRA2B-201ENST00000259043 CRELD1Q96HD1 420 aa8.6□□□□□ -1.03
TRA2B-201ENST00000259043 U3KQE9 123 aa8.6□□□□□ -1.03
TRA2B-201ENST00000259043 TMEM265A0A087WTH1 108 aa8.59□□□□□ -1.03
TRA2B-201ENST00000259043 LEFTY1O75610 366 aa8.59□□□□□ -1.03
TRA2B-201ENST00000259043 CEACAM5P06731 702 aa8.59□□□□□ -1.03
TRA2B-201ENST00000259043 MESP2Q0VG99 397 aa8.59□□□□□ -1.03
TRA2B-201ENST00000259043 ANGEL2Q5VTE6 544 aaKnown RBP8.59□□□□□ -1.03
TRA2B-201ENST00000259043 ARHGAP27Q6ZUM4 889 aa8.59□□□□□ -1.03
TRA2B-201ENST00000259043 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.59□□□□□ -1.03
TRA2B-201ENST00000259043 FAM84AQ96KN4 292 aa8.59□□□□□ -1.03
TRA2B-201ENST00000259043 DUSP23Q9BVJ7 150 aa8.59□□□□□ -1.03
TRA2B-201ENST00000259043 TFE3P19532 575 aaPredicted RBP8.58□□□□□ -1.04
TRA2B-201ENST00000259043 OXCT1P55809 520 aa8.58□□□□□ -1.04
TRA2B-201ENST00000259043 SEPT6Q14141 434 aa8.58□□□□□ -1.04
TRA2B-201ENST00000259043 MAP3K11Q16584 847 aa8.58□□□□□ -1.04
TRA2B-201ENST00000259043 SLC23A3Q6PIS1 610 aa8.58□□□□□ -1.04
TRA2B-201ENST00000259043 PHC3Q8NDX5 983 aa8.57□□□□□ -1.04
TRA2B-201ENST00000259043 FLAD1Q8NFF5 587 aa8.57□□□□□ -1.04
TRA2B-201ENST00000259043 ELMO3Q96BJ8 720 aa8.57□□□□□ -1.04
TRA2B-201ENST00000259043 PLAGL2Q9UPG8 496 aa8.57□□□□□ -1.04
TRA2B-201ENST00000259043 TLR6Q9Y2C9 796 aa8.57□□□□□ -1.04
TRA2B-201ENST00000259043 SNCAIPQ9Y6H5 919 aa8.57□□□□□ -1.04
TRA2B-201ENST00000259043 GFRA2O00451 464 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms