RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 MRPL46Q9H2W6 279 aaKnown RBP8.72□□□□□ -1.01
GPNMB-201ENST00000258733 NRDE2Q9H7Z3 1164 aa8.72□□□□□ -1.01
GPNMB-201ENST00000258733 ZWILCHQ9H900 591 aa8.72□□□□□ -1.01
GPNMB-201ENST00000258733 FAM169AQ9Y6X4 670 aa8.72□□□□□ -1.01
GPNMB-201ENST00000258733 ELP1O95163 1332 aa8.72□□□□□ -1.01
GPNMB-201ENST00000258733 ANKRD36BQ8N2N9 1353 aa8.72□□□□□ -1.01
GPNMB-201ENST00000258733 NDUFAB1O14561 156 aa8.72□□□□□ -1.01
GPNMB-201ENST00000258733 PDGFRBP09619 1106 aa8.72□□□□□ -1.01
GPNMB-201ENST00000258733 XAGE2Q96GT9 111 aa8.72□□□□□ -1.01
GPNMB-201ENST00000258733 PLEKHA4Q9H4M7 779 aa8.72□□□□□ -1.01
GPNMB-201ENST00000258733 VPS18Q9P253 973 aa8.72□□□□□ -1.01
GPNMB-201ENST00000258733 PRR12Q9ULL5 1215 aa8.72□□□□□ -1.01
GPNMB-201ENST00000258733 MYO1FO00160 1098 aa8.71□□□□□ -1.01
GPNMB-201ENST00000258733 GNAI1P63096 354 aa8.71□□□□□ -1.01
GPNMB-201ENST00000258733 NBPF14Q5TI25 921 aa8.71□□□□□ -1.01
GPNMB-201ENST00000258733 RSPH3Q86UC2 560 aa8.71□□□□□ -1.01
GPNMB-201ENST00000258733 USP6NLQ92738 828 aa8.71□□□□□ -1.01
GPNMB-201ENST00000258733 NAP1L3Q99457 506 aaPredicted RBP8.71□□□□□ -1.01
GPNMB-201ENST00000258733 UBE2OQ9C0C9 1292 aaKnown RBP8.71□□□□□ -1.01
GPNMB-201ENST00000258733 CNPY2Q9Y2B0 182 aa8.71□□□□□ -1.01
GPNMB-201ENST00000258733 TTLL3Q9Y4R7 772 aa8.71□□□□□ -1.01
GPNMB-201ENST00000258733 GMEB1Q9Y692 573 aa8.71□□□□□ -1.01
GPNMB-201ENST00000258733 TSPOAP1O95153 1857 aa8.71□□□□□ -1.01
GPNMB-201ENST00000258733 A0A0B4J203 849 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 TMEM232C9JQI7 657 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 TUFMP49411 452 aaKnown RBP8.71□□□□□ -1.02
GPNMB-201ENST00000258733 PDE3BQ13370 1112 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 CAMK2BQ13554 666 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 CCDC144BQ3MJ40 725 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 FIP1L1Q6UN15 594 aaKnown RBP8.71□□□□□ -1.02
GPNMB-201ENST00000258733 MCM10Q7L590 875 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 KRT77Q7Z794 578 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 PCGF5Q86SE9 256 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 TTC39CQ8N584 583 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 ESX1Q8N693 406 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 CEP112Q8N8E3 955 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.71□□□□□ -1.02
GPNMB-201ENST00000258733 PPP1R14BQ96C90 147 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 HOOK2Q96ED9 719 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 EPSTI1Q96J88 318 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 CDHR1Q96JP9 859 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 XPO4Q9C0E2 1151 aaKnown RBP8.71□□□□□ -1.02
GPNMB-201ENST00000258733 SEC31AO94979 1220 aaKnown RBP8.71□□□□□ -1.02
GPNMB-201ENST00000258733 POLR2FP61218 127 aaKnown RBP8.71□□□□□ -1.02
GPNMB-201ENST00000258733 POTEEQ6S8J3 1075 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 ZNF804AQ7Z570 1209 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 TMEM151BQ8IW70 566 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 VPS52Q8N1B4 723 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 ANKRD49Q8WVL7 239 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 ASIC4Q96FT7 647 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 UROC1Q96N76 676 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 NR1H4Q96RI1 486 aaPredicted RBP8.71□□□□□ -1.02
GPNMB-201ENST00000258733 KLC4Q9NSK0 619 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 MYO1AQ9UBC5 1043 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 ACAD8Q9UKU7 415 aa8.71□□□□□ -1.02
GPNMB-201ENST00000258733 ADAMTS12P58397 1594 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 FHOD3Q2V2M9 1422 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 EIF3AQ14152 1382 aaKnown RBP8.7□□□□□ -1.02
GPNMB-201ENST00000258733 PIK3R4Q99570 1358 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 H3BQF6 201 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 PPP1R12BO60237 982 aaPredicted RBP8.7□□□□□ -1.02
GPNMB-201ENST00000258733 BCRP11274 1271 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 CCNCP24863 283 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 FNTAP49354 379 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 C10orf76Q5T2E6 689 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 BZW1Q7L1Q6 419 aaKnown RBP8.7□□□□□ -1.02
GPNMB-201ENST00000258733 MAGEC3Q8TD91 643 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 MAML3Q96JK9 1138 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 DKK3Q9UBP4 350 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 SFMBT1Q9UHJ3 866 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 GOLGA6L4A6NEF3 574 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 TMEM247A6NEH6 219 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 PRPF40AO75400 957 aaKnown RBP8.7□□□□□ -1.02
GPNMB-201ENST00000258733 CHGAP10645 457 aaKnown RBP8.7□□□□□ -1.02
GPNMB-201ENST00000258733 CD53P19397 219 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 TUBA1BP68363 451 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 LBRQ14739 615 aaKnown RBP8.7□□□□□ -1.02
GPNMB-201ENST00000258733 EFCAB2Q5VUJ9 269 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 CCDC174Q6PII3 467 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 TUBA1AQ71U36 451 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 ZNF713Q8N859 430 aaPredicted RBP8.7□□□□□ -1.02
GPNMB-201ENST00000258733 USP26Q9BXU7 913 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 QTRT2Q9H974 415 aaKnown RBP8.7□□□□□ -1.02
GPNMB-201ENST00000258733 PREBQ9HCU5 417 aa8.7□□□□□ -1.02
GPNMB-201ENST00000258733 H0Y3Z8 333 aa8.69□□□□□ -1.02
GPNMB-201ENST00000258733 DIAPH1O60610 1272 aaKnown RBP8.69□□□□□ -1.02
GPNMB-201ENST00000258733 PPIDQ08752 370 aaKnown RBP8.69□□□□□ -1.02
GPNMB-201ENST00000258733 SEPT7Q16181 437 aaKnown RBP8.69□□□□□ -1.02
GPNMB-201ENST00000258733 MUM1Q2TAK8 710 aa8.69□□□□□ -1.02
GPNMB-201ENST00000258733 CTAGE1Q96RT6 745 aa8.69□□□□□ -1.02
GPNMB-201ENST00000258733 CEP131Q9UPN4 1083 aa8.69□□□□□ -1.02
GPNMB-201ENST00000258733 CHMP3Q9Y3E7 222 aa8.69□□□□□ -1.02
GPNMB-201ENST00000258733 ARIH1Q9Y4X5 557 aaPredicted RBP8.69□□□□□ -1.02
GPNMB-201ENST00000258733 MIA2Q96PC5 1412 aa8.69□□□□□ -1.02
GPNMB-201ENST00000258733 EBAG9O00559 213 aa8.69□□□□□ -1.02
GPNMB-201ENST00000258733 HOXA2O43364 376 aa8.69□□□□□ -1.02
GPNMB-201ENST00000258733 MBD3O95983 291 aa8.69□□□□□ -1.02
GPNMB-201ENST00000258733 IDO1P14902 403 aa8.69□□□□□ -1.02
GPNMB-201ENST00000258733 DYNC1I2Q13409 638 aaKnown RBP8.69□□□□□ -1.02
GPNMB-201ENST00000258733 PABPC1LQ4VXU2 614 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms