RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 PHACTR2O75167 634 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 IFIT1P09914 478 aaKnown RBP13.08□□□□□ -0.32
TROAP-201ENST00000257909 MYL6BP14649 208 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 PLCD1P51178 756 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 MAP9Q49MG5 647 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 KANK3Q6NY19 840 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 UBE3BQ7Z3V4 1068 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 TADA2BQ86TJ2 420 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 CNGA4Q8IV77 575 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 SAMSN1Q9NSI8 373 aaKnown RBP13.08□□□□□ -0.32
TROAP-201ENST00000257909 CCDC9Q9Y3X0 531 aaKnown RBP13.08□□□□□ -0.32
TROAP-201ENST00000257909 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 NWD2Q9ULI1 1742 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 AFDNP55196 1824 aaKnown RBP13.07□□□□□ -0.32
TROAP-201ENST00000257909 RBL2Q08999 1139 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 TRIM29Q14134 588 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 SWT1Q5T5J6 900 aaKnown RBP13.07□□□□□ -0.32
TROAP-201ENST00000257909 MMS22LQ6ZRQ5 1243 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 CCDC148Q8NFR7 591 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 CTAGE1Q96RT6 745 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 CPDO75976 1380 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 CAMTA1Q9Y6Y1 1673 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 FOXN1O15353 648 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 MFAP3LO75121 409 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 ZFYP08048 801 aaPredicted RBP13.07□□□□□ -0.32
TROAP-201ENST00000257909 FECHP22830 423 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 ANTXR2P58335 489 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 HAND2P61296 217 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 TRMT44Q8IYL2 757 aaKnown RBP13.07□□□□□ -0.32
TROAP-201ENST00000257909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.07□□□□□ -0.32
TROAP-201ENST00000257909 OSBP2Q969R2 916 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 DRC1Q96MC2 740 aa13.07□□□□□ -0.32
TROAP-201ENST00000257909 TRDNQ13061 729 aa13.06□□□□□ -0.32
TROAP-201ENST00000257909 RAB11FIP4Q86YS3 637 aa13.06□□□□□ -0.32
TROAP-201ENST00000257909 LMTK3Q96Q04 1460 aa13.06□□□□□ -0.32
TROAP-201ENST00000257909 PRPF6O94906 941 aaKnown RBP13.06□□□□□ -0.32
TROAP-201ENST00000257909 FGAP02671 866 aa13.06□□□□□ -0.32
TROAP-201ENST00000257909 PBX1P40424 430 aa13.06□□□□□ -0.32
TROAP-201ENST00000257909 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
TROAP-201ENST00000257909 FILIP1LQ4L180 1135 aa13.06□□□□□ -0.32
TROAP-201ENST00000257909 TMTC1Q8IUR5 882 aa13.06□□□□□ -0.32
TROAP-201ENST00000257909 AIFM3Q96NN9 605 aa13.06□□□□□ -0.32
TROAP-201ENST00000257909 CEP89Q96ST8 783 aa13.06□□□□□ -0.32
TROAP-201ENST00000257909 WWC3Q9ULE0 1092 aa13.06□□□□□ -0.32
TROAP-201ENST00000257909 MYO6Q9UM54 1294 aa13.06□□□□□ -0.32
TROAP-201ENST00000257909 A0A087WZG4 1122 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 ZNF213O14771 459 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 SYF2O95926 243 aaKnown RBP13.05□□□□□ -0.32
TROAP-201ENST00000257909 IL15P40933 162 aaPredicted RBP13.05□□□□□ -0.32
TROAP-201ENST00000257909 MCTP2Q6DN12 878 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 ATG9AQ7Z3C6 839 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 CCDC91Q7Z6B0 441 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 KCNH5Q8NCM2 988 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 ANGEL1Q9UNK9 670 aaKnown RBP13.05□□□□□ -0.32
TROAP-201ENST00000257909 A0A0U1RQJ8 604 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 SEMA3EO15041 775 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 TEX33O43247 280 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 TIMM10P62072 90 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 SLC9C2Q5TAH2 1124 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 SPATA1Q5VX52 437 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 LMBR1LQ6UX01 489 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 APTXQ7Z2E3 356 aaKnown RBP13.05□□□□□ -0.32
TROAP-201ENST00000257909 ATRIPQ8WXE1 791 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 ITIH6Q6UXX5 1313 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 SLIT3O75094 1523 aa13.05□□□□□ -0.32
TROAP-201ENST00000257909 FOXP2O15409 715 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 POLR2DO15514 142 aaKnown RBP13.04□□□□□ -0.32
TROAP-201ENST00000257909 KCNA4P22459 653 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 ZNF790Q6PG37 636 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 NOA1Q8NC60 698 aaKnown RBP13.04□□□□□ -0.32
TROAP-201ENST00000257909 SPATA20Q8TB22 786 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 CPLX3Q8WVH0 158 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 SMARCC1Q92922 1105 aaPredicted RBP13.04□□□□□ -0.32
TROAP-201ENST00000257909 MED15Q96RN5 788 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 CDC5LQ99459 802 aaKnown RBP13.04□□□□□ -0.32
TROAP-201ENST00000257909 TOMM22Q9NS69 142 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 ADD3Q9UEY8 706 aaKnown RBP13.04□□□□□ -0.32
TROAP-201ENST00000257909 SERTAD1Q9UHV2 236 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 PHF8Q9UPP1 1060 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 TMEM94Q12767 1356 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 SHOX2O60902 331 aaPredicted RBP13.04□□□□□ -0.32
TROAP-201ENST00000257909 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 PTPREP23469 700 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 AMPD2Q01433 879 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 ZNF827Q17R98 1081 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 WASHC4Q2M389 1173 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 MICALL1Q8N3F8 863 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
TROAP-201ENST00000257909 RBM33Q96EV2 1170 aaKnown RBP13.04□□□□□ -0.32
TROAP-201ENST00000257909 HPCAL4Q9UM19 191 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 WDR17Q8IZU2 1322 aa13.04□□□□□ -0.32
TROAP-201ENST00000257909 CASP14P31944 242 aa13.03□□□□□ -0.32
TROAP-201ENST00000257909 IARSP41252 1262 aaKnown RBP13.03□□□□□ -0.32
TROAP-201ENST00000257909 USP14P54578 494 aa13.03□□□□□ -0.32
TROAP-201ENST00000257909 CASP7P55210 303 aa13.03□□□□□ -0.32
TROAP-201ENST00000257909 KDM6AO15550 1401 aaPredicted RBP13.03□□□□□ -0.32
TROAP-201ENST00000257909 SCN11AQ9UI33 1791 aa13.03□□□□□ -0.32
TROAP-201ENST00000257909 LOC102724159A0A0B4J2E5 919 aa13.03□□□□□ -0.32
TROAP-201ENST00000257909 TARSL2A2RTX5 802 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms