RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 NIP7Q9Y221 180 aaKnown RBP eCLIP11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 A0A0G2JLW4 131 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 CTIFO43310 598 aaKnown RBP11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 ADD2P35612 726 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 FOXO4P98177 505 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 UBXN1Q04323 297 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 ZNF654Q8IZM8 581 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 TCP11L1Q9NUJ3 509 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 C3P01024 1663 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 PALLDQ8WX93 1383 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 EFCAB8A8MWE9 144 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 SH2B2O14492 632 aaPredicted RBP11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 CLSTN1O94985 981 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 CALM1P0DP23 149 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 CALM2P0DP24 149 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 CALM3P0DP25 149 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 CCZ1BP86790 482 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 CCZ1P86791 482 aaPredicted RBP11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 LONRF3Q496Y0 759 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 CRNKL1Q9BZJ0 848 aaKnown RBP11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 VPS18Q9P253 973 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 MAPK8IP1Q9UQF2 711 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 WDHD1O75717 1129 aaPredicted RBP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 KRT18P05783 430 aaKnown RBP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 KMT5BQ4FZB7 885 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 RBM43Q6ZSC3 357 aaKnown RBP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 ANKRD18AQ8IVF6 992 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 ZHX3Q9H4I2 956 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 LUC7LQ9NQ29 371 aaKnown RBP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 JADE2Q9NQC1 790 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 TCHHQ07283 1943 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 PSMA7O14818 248 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 PHACTR2O75167 634 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 OAS2P29728 719 aaKnown RBP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 PIP4K2BP78356 416 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 SETQ01105 290 aaPredicted RBP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 MB21D2Q8IYB1 491 aaPredicted RBP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 ZNF444Q8N0Y2 327 aaPredicted RBP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 SMARCC1Q92922 1105 aaPredicted RBP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 TSPYL1Q9H0U9 437 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 TMX4Q9H1E5 349 aaPredicted RBP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 WWC3Q9ULE0 1092 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 USO1O60763 962 aaKnown RBP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 PDE8BO95263 885 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 VSTM4Q8IW00 320 aa11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.42□□□□□ -0.58
SEMA6A-201ENST00000257414 COL9A3Q14050 684 aaPredicted RBP11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 TTC38Q5R3I4 469 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 TICAM2Q86XR7 235 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 GRAMD1CQ8IYS0 662 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 GPR161Q8N6U8 529 aaKnown RBP11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 PHLPP2Q6ZVD8 1323 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 NBPF26B4DH59 902 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 STX10O60499 249 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 CAPN2P17655 700 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 CYLC1P35663 651 aaPredicted RBP11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 CLCN6P51797 869 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 ATP2B2Q01814 1243 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 CCDC178Q5BJE1 867 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 NBPF14Q5TI25 921 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 NBPF10Q6P3W6 841 aaKnown RBP11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 NBPF15Q8N660 670 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 STX8Q9UNK0 236 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 KIF28PB7ZC32 967 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 ARMCX5Q6P1M9 558 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 CACNA2D4Q7Z3S7 1137 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 FCHSD1Q86WN1 690 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 FANCBQ8NB91 859 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 BPIFA3Q9BQP9 254 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 TAB2Q9NYJ8 693 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 SEC63Q9UGP8 760 aaKnown RBP11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 MROH5Q6ZUA9 1318 aa11.41□□□□□ -0.58
SEMA6A-201ENST00000257414 DNA2P51530 1060 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 SCARF1Q14162 830 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 PIK3AP1Q6ZUJ8 805 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 EHBP1Q8NDI1 1231 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 ENGASEQ8NFI3 743 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 PLIN2Q99541 437 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 NAPGQ99747 312 aaPredicted RBP11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 TTF2Q9UNY4 1162 aaKnown RBP11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 LUC7L2Q9Y383 392 aaKnown RBP11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 H0YHG0 523 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 SEC31AO94979 1220 aaKnown RBP11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 IDEP14735 1019 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 MCAMP43121 646 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 SMC1AQ14683 1233 aaKnown RBP11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 CTR9Q6PD62 1173 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 HDXQ7Z353 690 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 TBC1D10CQ8IV04 446 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 TRIML1Q8N9V2 468 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 CAPZA3Q96KX2 299 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 PIH1D3Q9NQM4 214 aaKnown RBP11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 RBM28Q9NW13 759 aaKnown RBP11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 FDPSP14324 419 aaKnown RBP11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 ZSCAN20P17040 1043 aaPredicted RBP11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 CALML3P27482 149 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 KRT9P35527 623 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 ATP6V1AP38606 617 aa11.4□□□□□ -0.58
SEMA6A-201ENST00000257414 MATR3P43243 847 aaKnown RBP eCLIP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms