RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZNF384Q8TF68 577 aa22.56■■□□□ 1.2
CDC42EP1-201ENST00000249014 WASF1Q92558 559 aa22.56■■□□□ 1.2
CDC42EP1-201ENST00000249014 CELF1Q92879 486 aaKnown RBP22.56■■□□□ 1.2
CDC42EP1-201ENST00000249014 GNL3LQ9NVN8 582 aaKnown RBP22.56■■□□□ 1.2
CDC42EP1-201ENST00000249014 MYH6P13533 1939 aa22.56■■□□□ 1.2
CDC42EP1-201ENST00000249014 TOB1P50616 345 aaPredicted RBP22.56■■□□□ 1.2
CDC42EP1-201ENST00000249014 ISM2Q6H9L7 571 aa22.56■■□□□ 1.2
CDC42EP1-201ENST00000249014 CRACR2BQ8N4Y2 399 aaPredicted RBP22.56■■□□□ 1.2
CDC42EP1-201ENST00000249014 ANAPC4Q9UJX5 808 aa22.56■■□□□ 1.2
CDC42EP1-201ENST00000249014 DYNLL1P63167 89 aaKnown RBP22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 SEC23AQ15436 765 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 FAM98CQ17RN3 349 aaKnown RBP22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 TBC1D9BQ66K14 1250 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 FILIP1Q7Z7B0 1213 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 DIS3L2Q8IYB7 885 aaKnown RBP22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 TRIM22Q8IYM9 498 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 TMTC2Q8N394 836 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 FANCBQ8NB91 859 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 NUP133Q8WUM0 1156 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 FAM84BQ96KN1 310 aaPredicted RBP22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 NCAPHQ15003 741 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 PTF1AQ7RTS3 328 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 C16orf45Q96MC5 204 aaPredicted RBP22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 UBAC1Q9BSL1 405 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 BCL2L12Q9HB09 334 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 TUBE1Q9UJT0 475 aa22.55■■□□□ 1.2
CDC42EP1-201ENST00000249014 TNKSO95271 1327 aa22.54■■□□□ 1.2
CDC42EP1-201ENST00000249014 CUTAO60888 179 aa22.54■■□□□ 1.2
CDC42EP1-201ENST00000249014 CAVIN4Q5BKX8 364 aa22.54■■□□□ 1.2
CDC42EP1-201ENST00000249014 DUOX1Q9NRD9 1551 aa22.54■■□□□ 1.2
CDC42EP1-201ENST00000249014 CYP2D7A0A087X1C5 515 aa22.53■■□□□ 1.2
CDC42EP1-201ENST00000249014 DEXIO95424 95 aa22.53■■□□□ 1.2
CDC42EP1-201ENST00000249014 KLRK1P26718 216 aa22.53■■□□□ 1.2
CDC42EP1-201ENST00000249014 PNOCQ13519 176 aa22.53■■□□□ 1.2
CDC42EP1-201ENST00000249014 RIOK3O14730 519 aaKnown RBP22.53■■□□□ 1.2
CDC42EP1-201ENST00000249014 RCAN1P53805 252 aa22.53■■□□□ 1.2
CDC42EP1-201ENST00000249014 ESR2Q92731 530 aa22.53■■□□□ 1.2
CDC42EP1-201ENST00000249014 CCDC196A0A1B0GTZ2 297 aa22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 CHAF1AQ13111 956 aaPredicted RBP22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 SAFBQ15424 915 aaKnown RBP eCLIP22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 LONRF3Q496Y0 759 aa22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 MYH13Q9UKX3 1938 aa22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 NEMFO60524 1076 aa22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 GTF2E1P29083 439 aaPredicted RBP22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 CCZ1BP86790 482 aa22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 CCZ1P86791 482 aaPredicted RBP22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 NR5A1Q13285 461 aa22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 SPECC1Q5M775 1068 aa22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 SLC10A5Q5PT55 438 aa22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 METTL16Q86W50 562 aaKnown RBP22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 XPO4Q9C0E2 1151 aaKnown RBP22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 FOXP1Q9H334 677 aaPredicted RBP22.52■■□□□ 1.2
CDC42EP1-201ENST00000249014 CNTNAP4Q9C0A0 1308 aa22.51■■□□□ 1.19
CDC42EP1-201ENST00000249014 GRIN1Q05586 938 aa22.51■■□□□ 1.19
CDC42EP1-201ENST00000249014 ENAHQ8N8S7 591 aaPredicted RBP22.51■■□□□ 1.19
CDC42EP1-201ENST00000249014 KRI1Q8N9T8 703 aaKnown RBP22.51■■□□□ 1.19
CDC42EP1-201ENST00000249014 SHISA4Q96DD7 197 aa22.51■■□□□ 1.19
CDC42EP1-201ENST00000249014 KCNH3Q9ULD8 1083 aa22.51■■□□□ 1.19
CDC42EP1-201ENST00000249014 SKILP12757 684 aa22.5■■□□□ 1.19
CDC42EP1-201ENST00000249014 OXER1Q8TDS5 423 aa22.5■■□□□ 1.19
CDC42EP1-201ENST00000249014 HSD3B7Q9H2F3 369 aa22.5■■□□□ 1.19
CDC42EP1-201ENST00000249014 IFNKQ9P0W0 207 aa22.5■■□□□ 1.19
CDC42EP1-201ENST00000249014 FBXO33Q7Z6M2 555 aa22.5■■□□□ 1.19
CDC42EP1-201ENST00000249014 FOXP4Q8IVH2 680 aaPredicted RBP22.5■■□□□ 1.19
CDC42EP1-201ENST00000249014 ZNF710Q8N1W2 664 aa22.5■■□□□ 1.19
CDC42EP1-201ENST00000249014 BRIP1Q9BX63 1249 aa22.5■■□□□ 1.19
CDC42EP1-201ENST00000249014 SRP68Q9UHB9 627 aaKnown RBP22.5■■□□□ 1.19
CDC42EP1-201ENST00000249014 USP27XA6NNY8 438 aa22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 KRBA2Q6ZNG9 492 aa22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 ZSCAN10Q96SZ4 725 aaPredicted RBP22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 PCDHB6Q9Y5E3 794 aa22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 SMTNL1A8MU46 457 aa22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 PRDM1O75626 825 aa22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 SMC2O95347 1197 aa22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 TNNT1P13805 278 aa22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 RILPL1Q5EBL4 403 aa22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 OSBPL5Q9H0X9 879 aaPredicted RBP22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 FBXO2Q9UK22 296 aaPredicted RBP22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 DLEC1Q9Y238 1755 aa22.49■■□□□ 1.19
CDC42EP1-201ENST00000249014 IKBKBO14920 756 aa22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 LMOD1P29536 600 aaPredicted RBP22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 EVX2Q03828 476 aa22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 TPD52L1Q16890 204 aaPredicted RBP22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 CTR9Q6PD62 1173 aa22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 CNNM3Q8NE01 707 aa22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 MAP7D2Q96T17 732 aa22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 FOXN1O15353 648 aa22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 RPS8P62241 208 aaKnown RBP22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 PIP4K2BP78356 416 aa22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 CCDC24Q8N4L8 307 aa22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 NSUN4Q96CB9 384 aaKnown RBP22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 RNF26Q9BY78 433 aaPredicted RBP22.48■■□□□ 1.19
CDC42EP1-201ENST00000249014 COL24A1Q17RW2 1714 aa22.47■■□□□ 1.19
CDC42EP1-201ENST00000249014 FGRP09769 529 aa22.47■■□□□ 1.19
CDC42EP1-201ENST00000249014 PTPREP23469 700 aa22.47■■□□□ 1.19
CDC42EP1-201ENST00000249014 PKN1Q16512 942 aa22.47■■□□□ 1.19
CDC42EP1-201ENST00000249014 IMPACTQ9P2X3 320 aa22.47■■□□□ 1.19
CDC42EP1-201ENST00000249014 NARFQ9UHQ1 456 aa22.47■■□□□ 1.19
CDC42EP1-201ENST00000249014 ATP1A3P13637 1013 aa22.46■■□□□ 1.19
CDC42EP1-201ENST00000249014 MDM2Q00987 491 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms