RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 KCNQ4P56696 695 aa29.42■■■□□ 2.3
RAB40C-201ENST00000248139 UBASH3AP57075 661 aa29.42■■■□□ 2.3
RAB40C-201ENST00000248139 TIGD1Q96MW7 591 aa29.42■■■□□ 2.3
RAB40C-201ENST00000248139 ADAMTS2O95450 1211 aa29.41■■■□□ 2.3
RAB40C-201ENST00000248139 PRR29P0C7W0 189 aa29.41■■■□□ 2.3
RAB40C-201ENST00000248139 IGHMBP2P38935 993 aaKnown RBP29.41■■■□□ 2.3
RAB40C-201ENST00000248139 CFAP100Q494V2 611 aa29.41■■■□□ 2.3
RAB40C-201ENST00000248139 KRT23Q9C075 422 aa29.41■■■□□ 2.3
RAB40C-201ENST00000248139 IMPACTQ9P2X3 320 aa29.41■■■□□ 2.3
RAB40C-201ENST00000248139 COL4A1P02462 1669 aa29.41■■■□□ 2.3
RAB40C-201ENST00000248139 PRDM1O75626 825 aa29.41■■■□□ 2.3
RAB40C-201ENST00000248139 CUTAO60888 179 aa29.4■■■□□ 2.3
RAB40C-201ENST00000248139 CAMTA2O94983 1202 aa29.4■■■□□ 2.3
RAB40C-201ENST00000248139 EVX2Q03828 476 aa29.4■■■□□ 2.3
RAB40C-201ENST00000248139 KRI1Q8N9T8 703 aaKnown RBP29.4■■■□□ 2.3
RAB40C-201ENST00000248139 PPP1R13BQ96KQ4 1090 aa29.4■■■□□ 2.3
RAB40C-201ENST00000248139 NACAP1Q9BZK3 213 aa29.4■■■□□ 2.3
RAB40C-201ENST00000248139 CNNM2Q9H8M5 875 aa29.4■■■□□ 2.3
RAB40C-201ENST00000248139 STRCQ7RTU9 1775 aa29.4■■■□□ 2.3
RAB40C-201ENST00000248139 POLR2DO15514 142 aaKnown RBP29.4■■■□□ 2.3
RAB40C-201ENST00000248139 MYL5Q02045 173 aa29.4■■■□□ 2.3
RAB40C-201ENST00000248139 C3orf67Q6ZVT6 689 aa29.4■■■□□ 2.3
RAB40C-201ENST00000248139 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.4■■■□□ 2.3
RAB40C-201ENST00000248139 CCDC152Q4G0S7 254 aa29.39■■■□□ 2.3
RAB40C-201ENST00000248139 STAG1Q8WVM7 1258 aa29.39■■■□□ 2.3
RAB40C-201ENST00000248139 RAI14Q9P0K7 980 aa29.39■■■□□ 2.3
RAB40C-201ENST00000248139 SYT10Q6XYQ8 523 aa29.39■■■□□ 2.3
RAB40C-201ENST00000248139 SHISA4Q96DD7 197 aa29.39■■■□□ 2.3
RAB40C-201ENST00000248139 PPARAQ07869 468 aa29.38■■■□□ 2.29
RAB40C-201ENST00000248139 TRIM22Q8IYM9 498 aa29.38■■■□□ 2.29
RAB40C-201ENST00000248139 ZNF654Q8IZM8 581 aa29.38■■■□□ 2.29
RAB40C-201ENST00000248139 CRACR2BQ8N4Y2 399 aaPredicted RBP29.38■■■□□ 2.29
RAB40C-201ENST00000248139 CABP5Q9NP86 173 aa29.38■■■□□ 2.29
RAB40C-201ENST00000248139 SERTAD1Q9UHV2 236 aa29.38■■■□□ 2.29
RAB40C-201ENST00000248139 ERICH2A1L162 156 aa29.38■■■□□ 2.29
RAB40C-201ENST00000248139 DYNLL1P63167 89 aaKnown RBP29.38■■■□□ 2.29
RAB40C-201ENST00000248139 SAFBQ15424 915 aaKnown RBP eCLIP29.38■■■□□ 2.29
RAB40C-201ENST00000248139 TRMT44Q8IYL2 757 aaKnown RBP29.38■■■□□ 2.29
RAB40C-201ENST00000248139 IKBKBO14920 756 aa29.38■■■□□ 2.29
RAB40C-201ENST00000248139 LRRN4CLQ8ND94 238 aa29.38■■■□□ 2.29
RAB40C-201ENST00000248139 NTSR2O95665 410 aa29.37■■■□□ 2.29
RAB40C-201ENST00000248139 FANCBQ8NB91 859 aa29.37■■■□□ 2.29
RAB40C-201ENST00000248139 LOC102724428A0A0B4J2F2 783 aa29.37■■■□□ 2.29
RAB40C-201ENST00000248139 SIK1P57059 783 aa29.37■■■□□ 2.29
RAB40C-201ENST00000248139 SART3Q15020 963 aaKnown RBP29.37■■■□□ 2.29
RAB40C-201ENST00000248139 CCDC150Q8NCX0 1101 aa29.37■■■□□ 2.29
RAB40C-201ENST00000248139 KIF18AQ8NI77 898 aa29.37■■■□□ 2.29
RAB40C-201ENST00000248139 OLFM4Q6UX06 510 aa29.36■■■□□ 2.29
RAB40C-201ENST00000248139 UBAC1Q9BSL1 405 aa29.36■■■□□ 2.29
RAB40C-201ENST00000248139 VPS54Q9P1Q0 977 aa29.36■■■□□ 2.29
RAB40C-201ENST00000248139 FBXO2Q9UK22 296 aaPredicted RBP29.36■■■□□ 2.29
RAB40C-201ENST00000248139 CHD4Q14839 1912 aa29.36■■■□□ 2.29
RAB40C-201ENST00000248139 EARS2Q5JPH6 523 aaKnown RBP29.36■■■□□ 2.29
RAB40C-201ENST00000248139 STK36Q9NRP7 1315 aa29.35■■■□□ 2.29
RAB40C-201ENST00000248139 IGSF3O75054 1194 aa29.35■■■□□ 2.29
RAB40C-201ENST00000248139 BICDL1Q6ZP65 573 aa29.35■■■□□ 2.29
RAB40C-201ENST00000248139 TNKSO95271 1327 aa29.35■■■□□ 2.29
RAB40C-201ENST00000248139 FAM237AA0A1B0GTK4 181 aa29.35■■■□□ 2.29
RAB40C-201ENST00000248139 MDM2Q00987 491 aaPredicted RBP29.35■■■□□ 2.29
RAB40C-201ENST00000248139 FMR1Q06787 632 aaKnown RBP eCLIP29.35■■■□□ 2.29
RAB40C-201ENST00000248139 ELF2Q15723 593 aa29.34■■■□□ 2.29
RAB40C-201ENST00000248139 NOM1Q5C9Z4 860 aaKnown RBP29.34■■■□□ 2.29
RAB40C-201ENST00000248139 INTS13Q9NVM9 706 aa29.34■■■□□ 2.29
RAB40C-201ENST00000248139 MAN1B1Q9UKM7 699 aa29.34■■■□□ 2.29
RAB40C-201ENST00000248139 BAZ2BQ9UIF8 2168 aaKnown RBP29.34■■■□□ 2.29
RAB40C-201ENST00000248139 CASP1P29466 404 aa29.34■■■□□ 2.29
RAB40C-201ENST00000248139 KCNQ2O43526 872 aa29.33■■■□□ 2.29
RAB40C-201ENST00000248139 PNPLA7Q6ZV29 1317 aa29.33■■■□□ 2.29
RAB40C-201ENST00000248139 TAF1P21675 1872 aa29.33■■■□□ 2.29
RAB40C-201ENST00000248139 DDB1Q16531 1140 aa29.33■■■□□ 2.29
RAB40C-201ENST00000248139 WASF1Q92558 559 aa29.33■■■□□ 2.29
RAB40C-201ENST00000248139 LRP5O75197 1615 aa29.32■■■□□ 2.28
RAB40C-201ENST00000248139 WNT7AO00755 349 aa29.32■■■□□ 2.28
RAB40C-201ENST00000248139 DEXIO95424 95 aa29.32■■■□□ 2.28
RAB40C-201ENST00000248139 GNAT2P19087 354 aa29.32■■■□□ 2.28
RAB40C-201ENST00000248139 POSTNQ15063 836 aa29.32■■■□□ 2.28
RAB40C-201ENST00000248139 SLC4A8Q2Y0W8 1093 aa29.32■■■□□ 2.28
RAB40C-201ENST00000248139 MAGEB6P1A0A0J9YX57 407 aa29.32■■■□□ 2.28
RAB40C-201ENST00000248139 PTPREP23469 700 aa29.32■■■□□ 2.28
RAB40C-201ENST00000248139 HOMER1Q86YM7 354 aa29.32■■■□□ 2.28
RAB40C-201ENST00000248139 CCDC24Q8N4L8 307 aa29.32■■■□□ 2.28
RAB40C-201ENST00000248139 MARCH10Q8NA82 808 aaPredicted RBP29.32■■■□□ 2.28
RAB40C-201ENST00000248139 CSRNP2Q9H175 543 aa29.32■■■□□ 2.28
RAB40C-201ENST00000248139 ERFEQ4G0M1 354 aa29.31■■■□□ 2.28
RAB40C-201ENST00000248139 PLEKHA8P1O95397 391 aa29.31■■■□□ 2.28
RAB40C-201ENST00000248139 SMAP1Q8IYB5 467 aaPredicted RBP29.31■■■□□ 2.28
RAB40C-201ENST00000248139 AK7Q96M32 723 aa29.31■■■□□ 2.28
RAB40C-201ENST00000248139 ZSCAN20P17040 1043 aaPredicted RBP29.3■■■□□ 2.28
RAB40C-201ENST00000248139 FAM177A1Q8N128 213 aaPredicted RBP29.3■■■□□ 2.28
RAB40C-201ENST00000248139 MYH14Q7Z406 1995 aaKnown RBP29.3■■■□□ 2.28
RAB40C-201ENST00000248139 KLRK1P26718 216 aa29.3■■■□□ 2.28
RAB40C-201ENST00000248139 ENAHQ8N8S7 591 aaPredicted RBP29.3■■■□□ 2.28
RAB40C-201ENST00000248139 JAG2Q9Y219 1238 aa29.3■■■□□ 2.28
RAB40C-201ENST00000248139 DOT1LQ8TEK3 1739 aa29.3■■■□□ 2.28
RAB40C-201ENST00000248139 ZNF384Q8TF68 577 aa29.29■■■□□ 2.28
RAB40C-201ENST00000248139 EPSTI1Q96J88 318 aa29.29■■■□□ 2.28
RAB40C-201ENST00000248139 MED15Q96RN5 788 aa29.29■■■□□ 2.28
RAB40C-201ENST00000248139 FOXP1Q9H334 677 aaPredicted RBP29.29■■■□□ 2.28
RAB40C-201ENST00000248139 TMX1Q9H3N1 280 aa29.29■■■□□ 2.28
RAB40C-201ENST00000248139 DOCK2Q92608 1830 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms