RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 BLZF1Q9H2G9 400 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 ZHX3Q9H4I2 956 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 MYO1CO00159 1063 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 NMT2O60551 498 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 MCM7P33993 719 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 ADKP55263 362 aaKnown RBP13.1□□□□□ -0.31
SOX9-201ENST00000245479 SUSD4Q5VX71 490 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 VWA3AA6NCI4 1184 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 MCM3P25205 808 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 CHMP4BP1P59074 171 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 RASGRF1Q13972 1273 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 ZNF569Q5MCW4 686 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 FKBP15Q5T1M5 1219 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 GOLGA5Q8TBA6 731 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 DESI2Q9BSY9 194 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 MKNK2Q9HBH9 465 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 ZCCHC17Q9NP64 241 aaKnown RBP13.1□□□□□ -0.31
SOX9-201ENST00000245479 TECPR2O15040 1411 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 SPATA31D1Q6ZQQ2 1576 aa13.1□□□□□ -0.31
SOX9-201ENST00000245479 GOLGA6L10A6NI86 522 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 CCT6AP40227 531 aaKnown RBP13.09□□□□□ -0.31
SOX9-201ENST00000245479 NLRP5P59047 1200 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 CAVIN4Q5BKX8 364 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 ZBTB38Q8NAP3 1195 aaPredicted RBP13.09□□□□□ -0.31
SOX9-201ENST00000245479 RASGRP4Q8TDF6 673 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 RABEP2Q9H5N1 569 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 CARMIL3Q8ND23 1372 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 PDE8BO95263 885 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 NBPF5PQ86XG9 351 aaPredicted RBP13.09□□□□□ -0.31
SOX9-201ENST00000245479 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
SOX9-201ENST00000245479 GPR161Q8N6U8 529 aaKnown RBP13.09□□□□□ -0.31
SOX9-201ENST00000245479 NKX2-3Q8TAU0 364 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 PPP1R13BQ96KQ4 1090 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 NUP88Q99567 741 aaPredicted RBP13.09□□□□□ -0.31
SOX9-201ENST00000245479 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 EFCAB8A8MWE9 144 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 CLSTN1O94985 981 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 GYS2P54840 703 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 IFNL3Q8IZI9 196 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 WDR17Q8IZU2 1322 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 FBXO18Q8NFZ0 1043 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 SH3TC1Q8TE82 1336 aa13.09□□□□□ -0.31
SOX9-201ENST00000245479 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
SOX9-201ENST00000245479 CTAGE9A4FU28 777 aa13.08□□□□□ -0.31
SOX9-201ENST00000245479 GOLGA8HP0CJ92 632 aa13.08□□□□□ -0.31
SOX9-201ENST00000245479 DNAJC21Q5F1R6 531 aaKnown RBP13.08□□□□□ -0.31
SOX9-201ENST00000245479 IQCEQ6IPM2 695 aa13.08□□□□□ -0.31
SOX9-201ENST00000245479 EPC1Q9H2F5 836 aa13.08□□□□□ -0.31
SOX9-201ENST00000245479 MCM9Q9NXL9 1143 aa13.08□□□□□ -0.31
SOX9-201ENST00000245479 MEGF6O75095 1541 aa13.08□□□□□ -0.32
SOX9-201ENST00000245479 SPATA31A3Q5VYP0 1347 aa13.08□□□□□ -0.32
SOX9-201ENST00000245479 CDKL5O76039 1030 aa13.08□□□□□ -0.32
SOX9-201ENST00000245479 MYL5Q02045 173 aa13.08□□□□□ -0.32
SOX9-201ENST00000245479 ODF2Q5BJF6 829 aa13.08□□□□□ -0.32
SOX9-201ENST00000245479 MEX3CQ5U5Q3 659 aaKnown RBP13.08□□□□□ -0.32
SOX9-201ENST00000245479 NAA16Q6N069 864 aaPredicted RBP13.08□□□□□ -0.32
SOX9-201ENST00000245479 USP17L12C9JPN9 530 aa13.08□□□□□ -0.32
SOX9-201ENST00000245479 USP17L21D6R901 530 aa13.08□□□□□ -0.32
SOX9-201ENST00000245479 FDPSP14324 419 aaKnown RBP13.08□□□□□ -0.32
SOX9-201ENST00000245479 PICALMQ13492 652 aa13.08□□□□□ -0.32
SOX9-201ENST00000245479 IFIT1BQ5T764 474 aaKnown RBP13.08□□□□□ -0.32
SOX9-201ENST00000245479 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.32
SOX9-201ENST00000245479 ZNF526Q8TF50 670 aaPredicted RBP13.08□□□□□ -0.32
SOX9-201ENST00000245479 MYCBPQ99417 103 aaPredicted RBP13.08□□□□□ -0.32
SOX9-201ENST00000245479 DSCC1Q9BVC3 393 aa13.08□□□□□ -0.32
SOX9-201ENST00000245479 EFCC1Q9HA90 598 aa13.08□□□□□ -0.32
SOX9-201ENST00000245479 NEDD4P46934 1319 aa13.08□□□□□ -0.32
SOX9-201ENST00000245479 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 CCDC47Q96A33 483 aaKnown RBP13.07□□□□□ -0.32
SOX9-201ENST00000245479 GNL3LQ9NVN8 582 aaKnown RBP13.07□□□□□ -0.32
SOX9-201ENST00000245479 FANCLQ9NW38 375 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 MAGEC2Q9UBF1 373 aaPredicted RBP13.07□□□□□ -0.32
SOX9-201ENST00000245479 ZPR1O75312 459 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 GRIN1Q05586 938 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 ANKRD18AQ8IVF6 992 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 PEAK1Q9H792 1746 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 ARHGAP6O43182 974 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 PDE8AO60658 829 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 USP49Q70CQ1 688 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 OXER1Q8TDS5 423 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 RGPD8O14715 1765 aaPredicted RBP13.07□□□□□ -0.32
SOX9-201ENST00000245479 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
SOX9-201ENST00000245479 ANKRD65E5RJM6 399 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 GNPATO15228 680 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 ZFYP08048 801 aaPredicted RBP13.07□□□□□ -0.32
SOX9-201ENST00000245479 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
SOX9-201ENST00000245479 CCDC152Q4G0S7 254 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 SERTAD1Q9UHV2 236 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 KCNH3Q9ULD8 1083 aa13.07□□□□□ -0.32
SOX9-201ENST00000245479 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 MAGEB6P1A0A0J9YX57 407 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 C6orf229H3BNL8 230 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
SOX9-201ENST00000245479 CRKLP46109 303 aaKnown RBP13.06□□□□□ -0.32
SOX9-201ENST00000245479 EVX2Q03828 476 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 E2F4Q16254 413 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 PLCD4Q9BRC7 762 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 KIAA1468Q9P260 1216 aa13.06□□□□□ -0.32
SOX9-201ENST00000245479 KDM6AO15550 1401 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms