RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 GNAT2P19087 354 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 PHKA1P46020 1223 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 TTC31Q49AM3 519 aaPredicted RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 CCDC40Q4G0X9 1142 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 TEX11Q8IYF3 940 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 ZNF335Q9H4Z2 1342 aaPredicted RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 ARHGEF40Q8TER5 1519 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 CYP27B1O15528 508 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 PDIA3P30101 505 aaKnown RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 CCT6AP40227 531 aaKnown RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 KRT40Q6A162 431 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 DIS3L2Q8IYB7 885 aaKnown RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 MICALL1Q8N3F8 863 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 FAM107BQ9H098 131 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 ST7Q9NRC1 585 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 KDRP35968 1356 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 ZBTB22O15209 634 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 FGAP02671 866 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 HSPD1P10809 573 aaKnown RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 SSR1P43307 286 aaKnown RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 MNAT1P51948 309 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 HNRNPH2P55795 449 aaKnown RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 FAM47AQ5JRC9 791 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 SYNE4Q8N205 404 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 OGFOD1Q8N543 542 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 ZNF274Q96GC6 653 aaPredicted RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 RPS8P62241 208 aaKnown RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 RBM6P78332 1123 aaKnown RBP10.47□□□□□ -0.73
COL21A1-201ENST00000244728 SPECC1LQ69YQ0 1117 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 CNKSR2Q8WXI2 1034 aa10.47□□□□□ -0.73
COL21A1-201ENST00000244728 MYO1BO43795 1136 aa10.46□□□□□ -0.73
COL21A1-201ENST00000244728 ATP1A3P13637 1013 aa10.46□□□□□ -0.73
COL21A1-201ENST00000244728 ERCC3P19447 782 aa10.46□□□□□ -0.73
COL21A1-201ENST00000244728 CTSWP56202 376 aa10.46□□□□□ -0.73
COL21A1-201ENST00000244728 ASIC1P78348 528 aa10.46□□□□□ -0.73
COL21A1-201ENST00000244728 EPHA10Q5JZY3 1008 aa10.46□□□□□ -0.73
COL21A1-201ENST00000244728 DRC1Q96MC2 740 aa10.46□□□□□ -0.73
COL21A1-201ENST00000244728 DSCC1Q9BVC3 393 aa10.46□□□□□ -0.73
COL21A1-201ENST00000244728 SEC31BQ9NQW1 1179 aa10.46□□□□□ -0.73
COL21A1-201ENST00000244728 RTEL1Q9NZ71 1219 aa10.46□□□□□ -0.73
COL21A1-201ENST00000244728 A0A1W2PQ27 194 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 A0A1W2PQ64 194 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 A0A1W2PQD8 194 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 USP17L12C9JPN9 530 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 USP17L21D6R901 530 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 PAFAH1B1P43034 410 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 ZNF827Q17R98 1081 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 MAPKAPK5Q8IW41 473 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 IPO4Q8TEX9 1081 aaKnown RBP10.46□□□□□ -0.74
COL21A1-201ENST00000244728 GOLPH3LQ9H4A5 285 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 GPCPD1Q9NPB8 672 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 LOC102724428A0A0B4J2F2 783 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 CMA1P23946 247 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 SIK1P57059 783 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 LETM2Q2VYF4 491 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 RNF187Q5TA31 235 aaPredicted RBP10.46□□□□□ -0.74
COL21A1-201ENST00000244728 FUCA2Q9BTY2 467 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 COPRSQ9NQ92 184 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 USP21Q9UK80 565 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 DENND2AQ9ULE3 1009 aa10.46□□□□□ -0.74
COL21A1-201ENST00000244728 CUTAO60888 179 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 TRIM21P19474 475 aaKnown RBP10.45□□□□□ -0.74
COL21A1-201ENST00000244728 LONRF3Q496Y0 759 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 GPIHBP1Q8IV16 184 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 CNGA4Q8IV77 575 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 FBXO18Q8NFZ0 1043 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 USO1O60763 962 aaKnown RBP10.45□□□□□ -0.74
COL21A1-201ENST00000244728 SPAG1Q07617 926 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 TCP10Q12799 353 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 DNAJC21Q5F1R6 531 aaKnown RBP10.45□□□□□ -0.74
COL21A1-201ENST00000244728 ZBTB38Q8NAP3 1195 aaPredicted RBP10.45□□□□□ -0.74
COL21A1-201ENST00000244728 CLIC6Q96NY7 704 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 NAPGQ99747 312 aaPredicted RBP10.45□□□□□ -0.74
COL21A1-201ENST00000244728 TSG101Q99816 390 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 ANKRD2Q9GZV1 360 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 ADGRB2O60241 1585 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 PDE6AP16499 860 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 GNAQP50148 359 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 IRX3P78415 501 aaPredicted RBP10.45□□□□□ -0.74
COL21A1-201ENST00000244728 MLKLQ8NB16 471 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 LINC00301Q8NCQ3 95 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 VPS16Q9H269 839 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 CARMIL3Q8ND23 1372 aa10.45□□□□□ -0.74
COL21A1-201ENST00000244728 MYCNP04198 464 aaPredicted RBP10.44□□□□□ -0.74
COL21A1-201ENST00000244728 ARID5AQ03989 594 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 CKAP4Q07065 602 aaKnown RBP10.44□□□□□ -0.74
COL21A1-201ENST00000244728 PIK3AP1Q6ZUJ8 805 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 HAUS7Q99871 368 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 PPRC1Q5VV67 1664 aaKnown RBP10.44□□□□□ -0.74
COL21A1-201ENST00000244728 TUBB4BP68371 445 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 POSTNQ15063 836 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 ZYXQ15942 572 aaKnown RBP10.44□□□□□ -0.74
COL21A1-201ENST00000244728 MSL1Q68DK7 614 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 EXOC1Q9NV70 894 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 PCDHA5Q9Y5H7 936 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 PARP3Q9Y6F1 533 aa10.44□□□□□ -0.74
COL21A1-201ENST00000244728 COL3A1P02461 1466 aaPredicted RBP10.44□□□□□ -0.74
COL21A1-201ENST00000244728 PHLPP2Q6ZVD8 1323 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms