RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 NLRP3Q96P20 1036 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 ZKSCAN3Q9BRR0 538 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 DUOX1Q9NRD9 1551 aa25.33■■□□□ 1.65
RNF39-201ENST00000244360 CCDC196A0A1B0GTZ2 297 aa25.32■■□□□ 1.64
RNF39-201ENST00000244360 ESR2Q92731 530 aa25.32■■□□□ 1.64
RNF39-201ENST00000244360 UBE2Q2LH0YL09 131 aa25.32■■□□□ 1.64
RNF39-201ENST00000244360 ZNF202O95125 648 aa25.32■■□□□ 1.64
RNF39-201ENST00000244360 GNL2Q13823 731 aaKnown RBP25.32■■□□□ 1.64
RNF39-201ENST00000244360 NBPF5PQ86XG9 351 aaPredicted RBP25.32■■□□□ 1.64
RNF39-201ENST00000244360 ZNF654Q8IZM8 581 aa25.32■■□□□ 1.64
RNF39-201ENST00000244360 TIGD1Q96MW7 591 aa25.32■■□□□ 1.64
RNF39-201ENST00000244360 ANKRD2Q9GZV1 360 aa25.32■■□□□ 1.64
RNF39-201ENST00000244360 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.32■■□□□ 1.64
RNF39-201ENST00000244360 HPSEQ9Y251 543 aa25.32■■□□□ 1.64
RNF39-201ENST00000244360 TRIM22Q8IYM9 498 aa25.31■■□□□ 1.64
RNF39-201ENST00000244360 ZNF710Q8N1W2 664 aa25.31■■□□□ 1.64
RNF39-201ENST00000244360 UBAC1Q9BSL1 405 aa25.31■■□□□ 1.64
RNF39-201ENST00000244360 GNPATO15228 680 aa25.31■■□□□ 1.64
RNF39-201ENST00000244360 MMP1P03956 469 aa25.31■■□□□ 1.64
RNF39-201ENST00000244360 FGRP09769 529 aa25.31■■□□□ 1.64
RNF39-201ENST00000244360 PCP11498 1178 aaKnown RBP25.31■■□□□ 1.64
RNF39-201ENST00000244360 CRACR2BQ8N4Y2 399 aaPredicted RBP25.31■■□□□ 1.64
RNF39-201ENST00000244360 NAT10Q9H0A0 1025 aaKnown RBP25.31■■□□□ 1.64
RNF39-201ENST00000244360 MINDY4BA8MYZ0 360 aa25.3■■□□□ 1.64
RNF39-201ENST00000244360 RIOK3O14730 519 aaKnown RBP25.3■■□□□ 1.64
RNF39-201ENST00000244360 ZPR1O75312 459 aa25.3■■□□□ 1.64
RNF39-201ENST00000244360 KLRK1P26718 216 aa25.3■■□□□ 1.64
RNF39-201ENST00000244360 GUCY1A2P33402 732 aa25.3■■□□□ 1.64
RNF39-201ENST00000244360 PPP2R5BQ15173 497 aa25.3■■□□□ 1.64
RNF39-201ENST00000244360 FANCBQ8NB91 859 aa25.3■■□□□ 1.64
RNF39-201ENST00000244360 BPIFA3Q9BQP9 254 aa25.3■■□□□ 1.64
RNF39-201ENST00000244360 DEXIO95424 95 aa25.29■■□□□ 1.64
RNF39-201ENST00000244360 MARCKSP29966 332 aaPredicted RBP25.29■■□□□ 1.64
RNF39-201ENST00000244360 DYNLL1P63167 89 aaKnown RBP25.29■■□□□ 1.64
RNF39-201ENST00000244360 NOSTRINQ8IVI9 506 aa25.29■■□□□ 1.64
RNF39-201ENST00000244360 NSUN4Q96CB9 384 aaKnown RBP25.29■■□□□ 1.64
RNF39-201ENST00000244360 CTIFO43310 598 aaKnown RBP25.29■■□□□ 1.64
RNF39-201ENST00000244360 TMED8Q6PL24 325 aaPredicted RBP25.29■■□□□ 1.64
RNF39-201ENST00000244360 TPTE2Q6XPS3 522 aa25.29■■□□□ 1.64
RNF39-201ENST00000244360 ERCC4Q92889 916 aaPredicted RBP25.29■■□□□ 1.64
RNF39-201ENST00000244360 TNKSO95271 1327 aa25.29■■□□□ 1.64
RNF39-201ENST00000244360 A0A087WWV3 80 aa25.28■■□□□ 1.64
RNF39-201ENST00000244360 BECN2A8MW95 431 aa25.28■■□□□ 1.64
RNF39-201ENST00000244360 SLC3A2P08195 630 aaKnown RBP25.28■■□□□ 1.64
RNF39-201ENST00000244360 SHC4Q6S5L8 630 aa25.28■■□□□ 1.64
RNF39-201ENST00000244360 ZMYND15Q9H091 742 aa25.28■■□□□ 1.64
RNF39-201ENST00000244360 NRBP1Q9UHY1 535 aa25.28■■□□□ 1.64
RNF39-201ENST00000244360 CCNL1Q9UK58 526 aaPredicted RBP25.28■■□□□ 1.64
RNF39-201ENST00000244360 MAST2Q6P0Q8 1798 aa25.28■■□□□ 1.64
RNF39-201ENST00000244360 RBM6P78332 1123 aaKnown RBP25.28■■□□□ 1.64
RNF39-201ENST00000244360 FOXP1Q9H334 677 aaPredicted RBP25.28■■□□□ 1.64
RNF39-201ENST00000244360 RTCBQ9Y3I0 505 aaKnown RBP25.28■■□□□ 1.64
RNF39-201ENST00000244360 LY75O60449 1722 aa25.27■■□□□ 1.64
RNF39-201ENST00000244360 TM4SF1P30408 202 aa25.27■■□□□ 1.64
RNF39-201ENST00000244360 LRMPQ12912 555 aa25.27■■□□□ 1.64
RNF39-201ENST00000244360 RESP18Q5W5W9 173 aa25.27■■□□□ 1.64
RNF39-201ENST00000244360 STK11IPQ8N1F8 1099 aa25.27■■□□□ 1.64
RNF39-201ENST00000244360 MYH13Q9UKX3 1938 aa25.27■■□□□ 1.64
RNF39-201ENST00000244360 IRS2Q9Y4H2 1338 aa25.27■■□□□ 1.64
RNF39-201ENST00000244360 TAF1LQ8IZX4 1826 aa25.27■■□□□ 1.64
RNF39-201ENST00000244360 SMIM22K7EJ46 135 aa25.27■■□□□ 1.64
RNF39-201ENST00000244360 CUTAO60888 179 aa25.27■■□□□ 1.64
RNF39-201ENST00000244360 HIBADHP31937 336 aaKnown RBP25.27■■□□□ 1.64
RNF39-201ENST00000244360 SAFBQ15424 915 aaKnown RBP eCLIP25.27■■□□□ 1.64
RNF39-201ENST00000244360 PAXBP1Q9Y5B6 917 aa25.27■■□□□ 1.64
RNF39-201ENST00000244360 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.26■■□□□ 1.63
RNF39-201ENST00000244360 SMTNL1A8MU46 457 aa25.26■■□□□ 1.63
RNF39-201ENST00000244360 SYCP1Q15431 976 aa25.26■■□□□ 1.63
RNF39-201ENST00000244360 AMIGO3Q86WK7 504 aa25.26■■□□□ 1.63
RNF39-201ENST00000244360 DIS3L2Q8IYB7 885 aaKnown RBP25.26■■□□□ 1.63
RNF39-201ENST00000244360 ENAHQ8N8S7 591 aaPredicted RBP25.26■■□□□ 1.63
RNF39-201ENST00000244360 ZSCAN10Q96SZ4 725 aaPredicted RBP25.26■■□□□ 1.63
RNF39-201ENST00000244360 DLEC1Q9Y238 1755 aa25.26■■□□□ 1.63
RNF39-201ENST00000244360 SYKP43405 635 aa25.25■■□□□ 1.63
RNF39-201ENST00000244360 MECOMQ03112 1051 aa25.25■■□□□ 1.63
RNF39-201ENST00000244360 DPCR1Q3MIW9 517 aa25.25■■□□□ 1.63
RNF39-201ENST00000244360 CTR9Q6PD62 1173 aa25.25■■□□□ 1.63
RNF39-201ENST00000244360 AOPEPQ8N6M6 819 aa25.25■■□□□ 1.63
RNF39-201ENST00000244360 ARHGEF1Q92888 912 aaKnown RBP25.25■■□□□ 1.63
RNF39-201ENST00000244360 RNF26Q9BY78 433 aaPredicted RBP25.25■■□□□ 1.63
RNF39-201ENST00000244360 BAZ2AQ9UIF9 1905 aaKnown RBP25.25■■□□□ 1.63
RNF39-201ENST00000244360 BTBD18B2RXH4 712 aa25.25■■□□□ 1.63
RNF39-201ENST00000244360 NLRP12P59046 1061 aa25.25■■□□□ 1.63
RNF39-201ENST00000244360 CACTINQ8WUQ7 758 aaKnown RBP25.25■■□□□ 1.63
RNF39-201ENST00000244360 TNRC6CQ9HCJ0 1690 aaKnown RBP25.25■■□□□ 1.63
RNF39-201ENST00000244360 SMAP1Q8IYB5 467 aaPredicted RBP25.24■■□□□ 1.63
RNF39-201ENST00000244360 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.24■■□□□ 1.63
RNF39-201ENST00000244360 TOB1P50616 345 aaPredicted RBP25.24■■□□□ 1.63
RNF39-201ENST00000244360 NUP133Q8WUM0 1156 aa25.24■■□□□ 1.63
RNF39-201ENST00000244360 TUBE1Q9UJT0 475 aa25.24■■□□□ 1.63
RNF39-201ENST00000244360 USP21Q9UK80 565 aa25.24■■□□□ 1.63
RNF39-201ENST00000244360 KCNJ14Q9UNX9 436 aa25.24■■□□□ 1.63
RNF39-201ENST00000244360 CYP2D7A0A087X1C5 515 aa25.23■■□□□ 1.63
RNF39-201ENST00000244360 UBAP1LF5GYI3 381 aa25.23■■□□□ 1.63
RNF39-201ENST00000244360 ZRSR1Q15695 479 aaKnown RBP25.23■■□□□ 1.63
RNF39-201ENST00000244360 LRRC8AQ8IWT6 810 aa25.23■■□□□ 1.63
RNF39-201ENST00000244360 ANKRD7Q92527 254 aa25.23■■□□□ 1.63
RNF39-201ENST00000244360 TSC1Q92574 1164 aa25.23■■□□□ 1.63
RNF39-201ENST00000244360 ORC4O43929 436 aa25.22■■□□□ 1.63
RNF39-201ENST00000244360 FUT2Q10981 343 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms