RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 BRD3Q15059 726 aa17.72■□□□□ 0.43
DDX55-201ENST00000238146 ADAM21Q9UKJ8 722 aa17.72■□□□□ 0.43
DDX55-201ENST00000238146 A0A1B0GTH6 734 aa17.72■□□□□ 0.43
DDX55-201ENST00000238146 SSRP1Q08945 709 aaKnown RBP17.72■□□□□ 0.43
DDX55-201ENST00000238146 SRGAP1Q7Z6B7 1085 aa17.72■□□□□ 0.43
DDX55-201ENST00000238146 ISCA1Q9BUE6 129 aa17.72■□□□□ 0.43
DDX55-201ENST00000238146 INCENPQ9NQS7 918 aa17.72■□□□□ 0.43
DDX55-201ENST00000238146 AKR1B15C9JRZ8 316 aaPredicted RBP17.71■□□□□ 0.43
DDX55-201ENST00000238146 GUCY1A2P33402 732 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 CHMP4BP1P59074 171 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 ZSCAN26Q16670 478 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 TMEM67Q5HYA8 995 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 TRIML1Q8N9V2 468 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 PANX2Q96RD6 677 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 LZTFL1Q9NQ48 299 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 SEC31BQ9NQW1 1179 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 FEZ2Q9UHY8 353 aaPredicted RBP17.71■□□□□ 0.43
DDX55-201ENST00000238146 ADGRG1Q9Y653 693 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 MST1RQ04912 1400 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 STK36Q9NRP7 1315 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 A0A0U1RQJ8 604 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 TEX33O43247 280 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 TAF7LQ5H9L4 462 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 RAD9BQ6WBX8 426 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 DIS3L2Q8IYB7 885 aaKnown RBP17.71■□□□□ 0.43
DDX55-201ENST00000238146 ATRIPQ8WXE1 791 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 EXOC4Q96A65 974 aa17.71■□□□□ 0.43
DDX55-201ENST00000238146 FMNL1O95466 1100 aaPredicted RBP17.7■□□□□ 0.42
DDX55-201ENST00000238146 MMP1P03956 469 aa17.7■□□□□ 0.42
DDX55-201ENST00000238146 APTXQ7Z2E3 356 aaKnown RBP17.7■□□□□ 0.42
DDX55-201ENST00000238146 ANKZF1Q9H8Y5 726 aa17.7■□□□□ 0.42
DDX55-201ENST00000238146 KCNJ14Q9UNX9 436 aa17.7■□□□□ 0.42
DDX55-201ENST00000238146 ECM29Q5VYK3 1845 aa17.7■□□□□ 0.42
DDX55-201ENST00000238146 MYH7P12883 1935 aa17.7■□□□□ 0.42
DDX55-201ENST00000238146 VGLL3A8MV65 326 aa17.7■□□□□ 0.42
DDX55-201ENST00000238146 PLCD1P51178 756 aa17.7■□□□□ 0.42
DDX55-201ENST00000238146 CHRNA2Q15822 529 aa17.7■□□□□ 0.42
DDX55-201ENST00000238146 SPATA20Q8TB22 786 aa17.7■□□□□ 0.42
DDX55-201ENST00000238146 TSPYL1Q9H0U9 437 aa17.7■□□□□ 0.42
DDX55-201ENST00000238146 PIH1D3Q9NQM4 214 aaKnown RBP17.7■□□□□ 0.42
DDX55-201ENST00000238146 PSD3Q9NYI0 1048 aa17.7■□□□□ 0.42
DDX55-201ENST00000238146 ACTN4O43707 911 aaKnown RBP17.69■□□□□ 0.42
DDX55-201ENST00000238146 ERCC5P28715 1186 aaPredicted RBP17.69■□□□□ 0.42
DDX55-201ENST00000238146 LIFRP42702 1097 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 UBE3CQ15386 1083 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 HNRNPLLQ8WVV9 542 aaKnown RBP17.69■□□□□ 0.42
DDX55-201ENST00000238146 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 PUF60Q9UHX1 559 aaKnown RBP17.69■□□□□ 0.42
DDX55-201ENST00000238146 CDC23Q9UJX2 597 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 SLC12A7Q9Y666 1083 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 ATRNO75882 1429 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 IDH1O75874 414 aaKnown RBP17.69■□□□□ 0.42
DDX55-201ENST00000238146 IFNAR1P17181 557 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 RBL2Q08999 1139 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 IFIT5Q13325 482 aaKnown RBP17.69■□□□□ 0.42
DDX55-201ENST00000238146 SAFBQ15424 915 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDX55-201ENST00000238146 BEND6Q5SZJ8 279 aaPredicted RBP17.69■□□□□ 0.42
DDX55-201ENST00000238146 USP49Q70CQ1 688 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 AK7Q96M32 723 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 PCDHB6Q9Y5E3 794 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 PLEKHG2Q9H7P9 1386 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 ZNF532Q9HCE3 1301 aa17.69■□□□□ 0.42
DDX55-201ENST00000238146 CSF1RP07333 972 aa17.68■□□□□ 0.42
DDX55-201ENST00000238146 TCIRG1Q13488 830 aa17.68■□□□□ 0.42
DDX55-201ENST00000238146 RILPL1Q5EBL4 403 aa17.68■□□□□ 0.42
DDX55-201ENST00000238146 ZNF579Q8NAF0 562 aaKnown RBP17.68■□□□□ 0.42
DDX55-201ENST00000238146 ZSWIM5Q9P217 1185 aa17.68■□□□□ 0.42
DDX55-201ENST00000238146 RIC1Q4ADV7 1423 aa17.68■□□□□ 0.42
DDX55-201ENST00000238146 IFIT3O14879 490 aaKnown RBP17.68■□□□□ 0.42
DDX55-201ENST00000238146 LMAN1P49257 510 aa17.68■□□□□ 0.42
DDX55-201ENST00000238146 METTL24Q5JXM2 366 aa17.68■□□□□ 0.42
DDX55-201ENST00000238146 CABLES1Q8TDN4 633 aa17.68■□□□□ 0.42
DDX55-201ENST00000238146 WASF1Q92558 559 aa17.68■□□□□ 0.42
DDX55-201ENST00000238146 RIPOR2Q9Y4F9 1068 aa17.68■□□□□ 0.42
DDX55-201ENST00000238146 PKD1L3Q7Z443 1732 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 KIF5CO60282 957 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 KANK3Q6NY19 840 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 CEP112Q8N8E3 955 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 IGSF22Q8N9C0 903 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 CPLX3Q8WVH0 158 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 PNKPQ96T60 521 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 NAA15Q9BXJ9 866 aaKnown RBP17.67■□□□□ 0.42
DDX55-201ENST00000238146 FOXP1Q9H334 677 aaPredicted RBP17.67■□□□□ 0.42
DDX55-201ENST00000238146 RAB21Q9UL25 225 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 SRPRBQ9Y5M8 271 aaKnown RBP17.67■□□□□ 0.42
DDX55-201ENST00000238146 AKAP11Q9UKA4 1901 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 COL18A1P39060 1754 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 PBX1P40424 430 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 USP5P45974 858 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 NR5A1Q13285 461 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 TTF1Q15361 905 aaPredicted RBP17.67■□□□□ 0.42
DDX55-201ENST00000238146 STRBPQ96SI9 672 aaKnown RBP17.67■□□□□ 0.42
DDX55-201ENST00000238146 PDE11AQ9HCR9 933 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 C1orf167Q5SNV9 1468 aa17.67■□□□□ 0.42
DDX55-201ENST00000238146 PDE6AP16499 860 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 MCM6Q14566 821 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 PPFIBP1Q86W92 1011 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 MSANTD4Q8NCY6 345 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 GOLGA5Q8TBA6 731 aa17.66■□□□□ 0.42
DDX55-201ENST00000238146 PLA2G12BQ9BX93 195 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms