RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 INCENPQ9NQS7 918 aa12.11□□□□□ -0.47
HMGCL-201ENST00000235958 ARPP21Q9UBL0 812 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-201ENST00000235958 SERPINB13Q9UIV8 391 aa12.11□□□□□ -0.47
HMGCL-201ENST00000235958 RBM8AQ9Y5S9 174 aaKnown RBP12.11□□□□□ -0.47
HMGCL-201ENST00000235958 FAM196BA6NMK8 535 aa12.1□□□□□ -0.47
HMGCL-201ENST00000235958 PPP1R12BO60237 982 aaPredicted RBP12.1□□□□□ -0.47
HMGCL-201ENST00000235958 EIF5BO60841 1220 aaKnown RBP12.1□□□□□ -0.47
HMGCL-201ENST00000235958 USP2O75604 605 aaPredicted RBP12.1□□□□□ -0.47
HMGCL-201ENST00000235958 NF2P35240 595 aa12.1□□□□□ -0.47
HMGCL-201ENST00000235958 CTDSPL2Q05D32 466 aa12.1□□□□□ -0.47
HMGCL-201ENST00000235958 GABPAQ06546 454 aa12.1□□□□□ -0.47
HMGCL-201ENST00000235958 PPARAQ07869 468 aa12.1□□□□□ -0.47
HMGCL-201ENST00000235958 PRKG1Q13976 671 aa12.1□□□□□ -0.47
HMGCL-201ENST00000235958 IMMTQ16891 758 aaKnown RBP12.1□□□□□ -0.47
HMGCL-201ENST00000235958 EHD4Q9H223 541 aa12.1□□□□□ -0.47
HMGCL-201ENST00000235958 ZNF408Q9H9D4 720 aa12.1□□□□□ -0.47
HMGCL-201ENST00000235958 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.1□□□□□ -0.47
HMGCL-201ENST00000235958 HERC5Q9UII4 1024 aaKnown RBP12.1□□□□□ -0.47
HMGCL-201ENST00000235958 ANAPC4Q9UJX5 808 aa12.1□□□□□ -0.47
HMGCL-201ENST00000235958 FZD1Q9UP38 647 aa12.1□□□□□ -0.47
HMGCL-201ENST00000235958 ZMYM6O95789 1325 aa12.1□□□□□ -0.47
HMGCL-201ENST00000235958 COL2A1P02458 1487 aaPredicted RBP12.09□□□□□ -0.47
HMGCL-201ENST00000235958 PHF20L1A8MW92 1017 aa12.09□□□□□ -0.47
HMGCL-201ENST00000235958 CELF2O95319 508 aaKnown RBP12.09□□□□□ -0.47
HMGCL-201ENST00000235958 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
HMGCL-201ENST00000235958 CDK8P49336 464 aa12.09□□□□□ -0.47
HMGCL-201ENST00000235958 DCAF15Q66K64 600 aa12.09□□□□□ -0.47
HMGCL-201ENST00000235958 MOB2Q70IA6 237 aa12.09□□□□□ -0.47
HMGCL-201ENST00000235958 SLC44A5Q8NCS7 719 aa12.09□□□□□ -0.47
HMGCL-201ENST00000235958 BACH2Q9BYV9 841 aa12.09□□□□□ -0.47
HMGCL-201ENST00000235958 PASKQ96RG2 1323 aa12.09□□□□□ -0.47
HMGCL-201ENST00000235958 UBE2Q2LH0YL09 131 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 EPB41L2O43491 1005 aaKnown RBP12.08□□□□□ -0.48
HMGCL-201ENST00000235958 CYP21A2P08686 494 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 SHMT1P34896 483 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 TTLL12Q14166 644 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-201ENST00000235958 CREB3L3Q68CJ9 461 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 TATDN1Q6P1N9 297 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 C2orf69Q8N8R5 385 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 KLRG1Q96E93 195 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 TRIM34Q9BYJ4 488 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 ZNF341Q9BYN7 854 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 NBPF3Q9H094 633 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 DNAJC18Q9H819 358 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 MKNK2Q9HBH9 465 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 ZNF112Q9UJU3 913 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 ANGEL1Q9UNK9 670 aaKnown RBP12.08□□□□□ -0.48
HMGCL-201ENST00000235958 TACC3Q9Y6A5 838 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 NAV1Q8NEY1 1877 aa12.08□□□□□ -0.48
HMGCL-201ENST00000235958 SLC27A2O14975 620 aa12.07□□□□□ -0.48
HMGCL-201ENST00000235958 PRDM1O75626 825 aa12.07□□□□□ -0.48
HMGCL-201ENST00000235958 FGRP09769 529 aa12.07□□□□□ -0.48
HMGCL-201ENST00000235958 PDE4BQ07343 736 aa12.07□□□□□ -0.48
HMGCL-201ENST00000235958 RRP1BQ14684 758 aaKnown RBP12.07□□□□□ -0.48
HMGCL-201ENST00000235958 CERKLQ49MI3 558 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-201ENST00000235958 AKNAD1Q5T1N1 836 aa12.07□□□□□ -0.48
HMGCL-201ENST00000235958 MFSD6Q6ZSS7 791 aa12.07□□□□□ -0.48
HMGCL-201ENST00000235958 ARMC9Q7Z3E5 817 aa12.07□□□□□ -0.48
HMGCL-201ENST00000235958 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
HMGCL-201ENST00000235958 ZNF444Q8N0Y2 327 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-201ENST00000235958 GBA2Q9HCG7 927 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-201ENST00000235958 SWAP70Q9UH65 585 aa12.07□□□□□ -0.48
HMGCL-201ENST00000235958 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
HMGCL-201ENST00000235958 TAF6LQ9Y6J9 622 aa12.07□□□□□ -0.48
HMGCL-201ENST00000235958 TRPM7Q96QT4 1865 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 INPP5BP32019 993 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 HSPA4P34932 840 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 IREB2P48200 963 aaKnown RBP12.06□□□□□ -0.48
HMGCL-201ENST00000235958 C1QTNF8P60827 252 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 MAP3K11Q16584 847 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 LDLRAD1Q5T700 205 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 RNF20Q5VTR2 975 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 TBC1D10CQ8IV04 446 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 KCNB2Q92953 911 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 ZKSCAN4Q969J2 545 aaPredicted RBP12.06□□□□□ -0.48
HMGCL-201ENST00000235958 WRNIP1Q96S55 665 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 ZNF287Q9HBT7 754 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 SIPA1L1O43166 1804 aa12.06□□□□□ -0.48
HMGCL-201ENST00000235958 SSC5DA1L4H1 1573 aa12.05□□□□□ -0.48
HMGCL-201ENST00000235958 E7EWF7 191 aa12.05□□□□□ -0.48
HMGCL-201ENST00000235958 CTNND1O60716 968 aaKnown RBP12.05□□□□□ -0.48
HMGCL-201ENST00000235958 RASA1P20936 1047 aa12.05□□□□□ -0.48
HMGCL-201ENST00000235958 CAP2P40123 477 aa12.05□□□□□ -0.48
HMGCL-201ENST00000235958 FKBP1BP68106 108 aa12.05□□□□□ -0.48
HMGCL-201ENST00000235958 JAG1P78504 1218 aa12.05□□□□□ -0.48
HMGCL-201ENST00000235958 TSGA10IPQ3SY00 556 aa12.05□□□□□ -0.48
HMGCL-201ENST00000235958 RRP12Q5JTH9 1297 aaKnown RBP12.05□□□□□ -0.48
HMGCL-201ENST00000235958 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-201ENST00000235958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.05□□□□□ -0.48
HMGCL-201ENST00000235958 STAG1Q8WVM7 1258 aa12.05□□□□□ -0.48
HMGCL-201ENST00000235958 CCDC17Q96LX7 622 aa12.05□□□□□ -0.48
HMGCL-201ENST00000235958 RNF41Q9H4P4 317 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-201ENST00000235958 TOMM22Q9NS69 142 aa12.05□□□□□ -0.48
HMGCL-201ENST00000235958 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.05□□□□□ -0.48
HMGCL-201ENST00000235958 ROBO3Q96MS0 1386 aa12.05□□□□□ -0.48
HMGCL-201ENST00000235958 DDX60LQ5H9U9 1706 aaKnown RBP12.04□□□□□ -0.48
HMGCL-201ENST00000235958 TMEM88BA6NKF7 163 aa12.04□□□□□ -0.48
HMGCL-201ENST00000235958 ORC4O43929 436 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms